Simulation of Hydrophysical Processes in Coastal Regions of the Sea

In the present work, we generalize the results of our investigations in the field of simulation of hydrophysical and ecological processes in coastal regions of various seas and some closed basins. The developed and applied mathematical models and the results of numerical experiments are briefly analyzed.     

A Functional Analysis of the Benthic Macrofauna of the São Sebastião Channel (Southeastern Brazil)

Abstract.  The major problem in coastal areas of developing countries is disturbance caused by anthropogenic influence. This disturbance can be quantified by analysing the distribution and composition of marine communities using uni- and multivariate techniques and the biotic index. A study of benthic macrofauna was carried out along the São Sebastião Channel, northern coast of São Paulo State, Brazil, in an area with a submarine outfall, a petroleum terminal and a commercial harbour. Sampling was undertaken seasonally, by means of a van Veen grab (0.1 m²) at 15 oceanographic stations, from November 1993 to August 1994. A total of 392 species were identified (129 Polychaeta, 127 Mollusca, 98 Crustacea, 28 Echinodermata and 10 other phyla). The sedimentary pattern recorded for the São Sebastião Channel is very heterogeneous, influenced mainly by strong wind-driven currents, and differs from nearby shelf areas. The study area could be divided into three regions based on sediment texture and fauna: one region dominated by medium and coarse sand with low values of organic carbon; a second area where pelitic fractions were dominant with high values of organic carbon and nitrogen; and a third region characterised by fine and very fine sand, presenting intermediate organic carbon values. No temporal significant variation in abundance and species composition was found, except in autumn. The use of the 'marine Biotic Coefficient' showed the same ecological trend as the faunal abundance and demonstrated that the central continental region of the channel is affected by human activities.     

Stress and deformation of offshore piles under structural and wave loading

Various offshore structures, especially large structures such as Tension Leg Platforms (TLP), are usually supported by concrete piles as the foundation elements. The stress distribution within such a large structure is a dominant factor in the design procedure of an offshore pile. To provide a more accurate and effective design for offshore foundation systems under axial and lateral wave loads, a finite element model is employed herein to determine the stresses and displacements in a concrete pile under similar loading conditions. A parametric study is also performed to examine the effects of the stress distribution due to the changing loading conditions.     

Phototoxicity of pyrene and benzo[a]pyrene to embryo-larval stages of the Pacific oyster Crassostrea gigas

There is a growing body of evidence to suggest that certain polycyclic aromatic hydrocarbons (PAHs) pose a greater hazard to aquatic organisms than previously demonstrated, due to their potential to cause photo-induced toxicity when exposed to ultraviolet (UV) radiation. The consequences of photo-induced toxicity are reported here for embryo-larval stages of the pacific oyster Crassostrea gigas, following exposure to pyrene and benzo[a]pyrene. During laboratory investigations, significant increases in toxicity were observed in the presence of environmentally attainable levels of UV-radiation, compared with embryos exposed to PAH alone, at levels previously deemed to have little acute biological effect. The phototoxicity of pyrene and benzo[a]pyrene completely inhibited the development to the D-shell larval stage when embryos were simultaneously exposed to 5 microg l(-1) PAH and ultraviolet light (UVB = 6.3 +/- 0.1 microW/cm2 and UVA = 456.2 +/- 55 microW/cm2). A linear relationship was also demonstrated for benzo[a]pyrene phototoxicity with decreasing UV light intensity.     

Particulate and dissolved amino acids in the lower Mississippi and Pearl Rivers (USA)

In this study, we present seasonal changes (monthly samples from September 2001 to August 2003) in the abundance and composition of dissolved and particulate amino acids, at one station in the lower Mississippi and Pearl Rivers (LA, MS: USA). Spatial changes over a 4-day transmit from river km 390 to river mouth (Head of Passes, LA) in the Mississippi River, and a two-day downstream sampling from Jackson (MS) to Stennis Space Center (MS) were also determined. Temporal data in the lower Mississippi River showed significantly lower concentrations of dissolved combined amino acids (DCAA, 0.8 to 2.2 μM) and dissolved amino acids in high molecular weight fraction (HMW DAA, 0.2–0.4 μM) than in the Pearl River (DCAA, 1.4–4.3 μM; HMW DAA, 0.4–1.4 μM). Dissolved free amino acids (DFAA) were significantly lower than DCAA in both rivers, and displayed minimal seasonal variability. DCAA, HMW DAA, and particulate amino acids (PAA) were generally higher during high-flow periods, which may have suggested dominance in terrestrial sources. Carbon-normalized yield of PAA (%C-PAA) was generally higher during low-flow conditions and positively correlated with chlorophyll-a (chl-a), reflective of in situ sources. Downstream variability in the lower Mississippi River showed stable DCAA concentrations, a decline in PAA (from 1.06 to 0.43 μM), and a gradual increase in mole percent of non-protein amino acids (%NPAA). This likely reflected bacterial degradation of phytoplankton biomass during falling discharge. Nitrogen-normalized yield of PAA (%N-PAA) was inversely correlated with PAA (R = − 0.7, n = 48), indicative of short-term sedimentation and resuspension events. Conversely, downstream decreases in DCAA and middle-reach peaks of PAA and %N-PAA in the Pearl River, likely resulted from photochemical degradation of DOM as well as algal production during base-flow conditions. The comparisons in abundance and composition of DAA and PAA in these different river systems provides important information on in situ nitrogen and carbon cycling as related to riverine inputs of organic matter to coastal ocean.     

The circulation of the eastern tropical Pacific: A review

During the 1950s and 1960s, an extensive field study and interpretive effort was made by researchers, primarily at the Scripps Institution of Oceanography, to sample and understand the physical oceanography of the eastern tropical Pacific. That work was inspired by the valuable fisheries of the region, the recent discovery of the equatorial undercurrent, and the growing realization of the importance of the El Niño phenomenon. Here we review what was learned in that effort, and integrate those findings with work published since then as well as additional diagnoses based on modern data sets.Unlike the central Pacific, where the winds are nearly zonal and the ocean properties and circulation are nearly independent of longitude, the eastern tropical Pacific is distinguished by wind forcing that is strongly influenced by the topography of the American continent. Its circulation is characterized by short zonal scales, permanent eddies and significant off-equatorial upwelling. Notably, the Costa Rica Dome and a thermocline bowl to its northwest are due to winds blowing through gaps in the Central American cordillera, which imprint their signatures on the ocean through linear Sverdrup dynamics. Strong annual modulation of the gap winds and the meridional oscillation of the Intertropical Convergence Zone generates a Rossby wave, superimposed on the direct forcing, that results in a southwestward-propagating annual thermocline signal accounting for major features of observed thermocline depth variations, including that of the Costa Rica Dome, the Tehuantepec bowl, and the ridge–trough system of the North Equatorial Countercurrent (NECC). Interannual variability of sea surface temperature (SST) and altimetric sea surface height signals suggests that the strengthening of the NECC observed in the central Pacific during El Niño events continues all the way to the coast, warming SST (by zonal advection) in a wider meridional band than the equatorially trapped thermocline anomalies, and pumping equatorial water poleward along the coast.The South Equatorial Current originates as a combination of equatorial upwelling, mixing and advection from the NECC, and Peru coastal upwelling, but its sources and their variability remain unresolved. Similarly, while much of the Equatorial Undercurrent flows southeast into the Peru Undercurrent and supplies the coastal upwelling, a quantitative assessment is lacking. We are still unable to put together the eastern interconnections among the long zonal currents of the central Pacific.     

The dynamic behaviour of a river-dominated tidal inlet, River Murray, Australia

Australia's largest river, the River Murray, discharges to the southern ocean through a coastal lagoon and river-dominated tidal inlet. Increased water extractions upstream for irrigation have led to significantly reduced flows at the mouth and, as a result, the area is undergoing rapid change, particularly with regard to the rate at which sediment is being transported into the lagoon. Based on detailed and accurate bathymetric surveys it has been possible to estimate that the rate of lagoon in-filling is of the order of 100,000 m³ per year for the period June 2000 to May 2003, although the actual rate shows significant year to year variability. Dredging of the lagoon commenced in 2000 in an attempt to reverse the trend.In an effort to understand the behaviour of the inlet a one-dimensional numerical model of the inlet has been developed. The model extends the original of van de Kreeke by including a dynamic inlet throat area based on predicted river flows and a sediment transport module to predict the resulting net sediment transport. Comparisons with water level data collected on both the ocean and lagoon sides of the mouth have shown that the model is able to predict the attenuation and lag of the tidal signal reasonably well. The sediment transport model was based on predicted sediment concentrations in the surf zone and was found to predict the rate of sediment in-filling to an acceptable level of accuracy. It is envisaged that the model will be a useful management tool, especially since it is possible to manipulate river discharges to the mouth.     

Assessment of cytochrome P450 1A in harbour seals (Phoca vitulina) using a minimally-invasive biopsy approach

Biomarkers of organochlorine exposure, such as the induction of cytochrome P450 1A (CYP1A), can be used to assess the impact of environmental contaminants on the health of free-ranging marine mammal populations. The objective of the present study was to measure CYP1A in skin and liver biopsies obtained from live harbour seals (Phoca vitulina). Twelve harbour seal pups, aged three to five weeks, were captured from the Fraser River estuary, British Columbia, Canada, and temporarily held in captivity. Skin ( approximately 60 mg) and liver ( approximately 40 mg) biopsies, obtained while seals were under general anaesthesia, yielded sufficient tissue for the measurement of CYP1A by immunoblot analysis and ethoxyresorufin O-deethylase activity. A short-term exposure experiment, in which harbour seals (n=3) were treated orally with beta-naphthoflavone (BNF), resulted in increased hepatic and cutaneous CYP1A protein levels, consistent with observations in other mammals. This study is the first to measure CYP1A in skin and liver biopsies from live harbour seals and to report in vivo BNF-associated CYP1A induction in a marine mammal. The results demonstrate that microsamples collected using minimally-invasive techniques can provide toxicologically-relevant information form marine mammals.     

Path following control system for a tanker ship model

A two-dimensional path following control system for autonomous marine surface vessels is presented. The guidance system is obtained through a way-point guidance scheme based on line-of-sight projection algorithm and the speed controller is achieved through state feedback linearization. A new approach concerning the calculation of a dynamic line-of-sight vector norm is presented which main idea is to improve the speed of the convergence of the vehicle to the desired path. The results obtained are compared with the traditional line-of-sight scheme. It is intended that the complete system will be tested and implemented in a model of the “Esso Osaka” tanker. The results of simulations are presented here showing the effectiveness of the system aiming in to be robust enough to perform tests either in tanks or lakes.     

Time domain modelling of the transient asymmetric flooding of Ro-Ro ships

This work aims at contributing to improve knowledge on transient asymmetric flooding through theoretical and experimental research. First, a time domain theoretical model of ship motions and flooding is described. Results from experimental work are presented evidencing that transient asymmetric flooding may cause the capsizing of a Ro-Ro shaped barge. The theoretical model is used to predict the capsize of the Ro-Ro shaped barge. Reasonable agreement between experimental and theoretical results was found. Finally, a review of the European Gateway accident is given and the theoretical model is applied to the study of this type of accident. The conclusion is that this theoretical model, together with an accurate modelling of the flooding of machinery compartments, reproduces successfully the capsizing of the European Gateway due to transient asymmetric flooding. Therefore, the internal arrangement of Ro-Ro ships should be carefully studied at the design stage in order to avoid this phenomenon.