Validating a turbulence closure against estuarine microstructure measurements

A simple k–ε turbulence closure is introduced which has no stability functions but instead a Richardson number-dependent turbulent Prandtl number. Its free parameters are determined in a comparison with microstructure observations from a stratified and sheared tidal estuary and laboratory measurements. The closure is able to simulate observed turbulent dissipation rates (ε) and turbulent length scales (l_th) in regions of strong mean shear and small gradient Richardson number (R_g) to within factors of 2–3. It fails in regions of small shear and large R_g, presumably because of the dominance of internal wave-driven mixing. Additional simulations with a k–ε closure with stability functions taken from Canuto et al. [Canuto, V.M., Howard, A., Cheng, Y., Dubovikov, M.S., 2001. Ocean turbulence I: one-point closure model. Momentum and heat vertical diffusivities. J. Phys. Oceanogr. 31, 1413–1426] and with the closure of Baumert and Peters [Baumert, H., Peters, H., 2004. Turbulence closure, steady state, and collapse into waves. J. Phys. Oceanogr. 34, 505–512] show poor performance. Establishing a valid 1:1 comparison of simulated and observed ε and l_th requires nudging the model velocity and density toward observed values because free model integrations quickly diverge from the observations. Steady state gradient Richardson numbers are constrained to a range of 0.18–0.25, while flux Richardson numbers are constrained to the range of 0.1–0.22. The closure output is rather insensitive to such parameter variations. The simulations are sensitive, however, to the treatment of the observed velocity and density used to nudge the model. Good closure performance requires averaging the measured tidal flow over about an hour, a time scale for which conventional numerical models of estuarine circulations should be able to match observed shears. In the closure simulations the TKE balance stays close to a production–dissipation balance. The time rate of change and vertical diffusion of TKE are small, of the same order of magnitude, and vary in magnitude relative to each other systematically across the water column.     

Some properties of unstable slip on rough surfaces

In this paper we report results obtained from various friction experiments under direct and oblique shear loading conditions. We used four rock types of varying brittleness (quartzite, anhydrite, limestone, pyrophyllite) with different surface roughness. The observations concentrate on the time span several milliseconds before dynamic failure occurs. During this period a premonitory, unstable phase of slip (slip 2) occurs. This differs importantly from a premonitory, stable process (slip 1) with durations of hundreds of seconds. On smooth surfaces slip 2 is usually observed with ductile rocks and less reliably with brittle rocks. Slip 2 is mostly accompanied by acoustic emissions, which increase in rate of occurrence and in magnitude until the stick-slip event. Foreshocks are observed during approximately 50% of the slip 2 events on rough surfaces. Foreshocks far exceed the acoustic noise level, which is also prevalent before stick-slip events on rough surfaces. In the direct shear experiment, where two faults are being loaded simultaneously, in about 20% of the cases precursory slip 2 was observed on the opposite side on which the final stick-slip event occurred.     

Monsoon-induced upwelling off the Vietnamese coast

During the southwest monsoon from July 8 to 28, 2003, an interdisciplinary cruise took place in the central area of Vietnamese upwelling with “MV Nghien Cuu Bien” in the South China Sea. Physical observations in the upwelling area are analyzed with respect to local/regional wind forcing and far field forcing. Nutrients and phytoplankton measurements are discussed with respect to exchange processes between different water masses. The wind-induced coastal upwelling by local wind forcing is much weaker than in the previous years due to weaker-than-normal winds. This can be attributed to the far field forcing of the 2002/2003 El Niño event which modulates the upwelling intensity. The atmospheric conditions reflect the typical situation after an El Niño event which weakens the wind-induced coastal upwelling, reduces the latent heat flux, and results in higher-than-normal sea-surface temperatures. The general circulation pattern during SW monsoon is driven by the spatial asymmetry in the monsoon forcing. The flow pattern is characterized by an upwelling-induced northward undercurrent and a recently detected southward countercurrent. The resulting stretching deformation of this flow pattern forms an offshore jet between ～12°N and 12.5°N and causes a local enhancement of the upwelling intensity. The upwelling due to stretching deformation is a peculiarity, which makes the Vietnamese upwelling area different to other upwelling areas. A budget of the upwelling components is presented: the strongest contribution in 2003 to the Vietnamese upwelling is the dynamical upwelling due to the clockwise rotation of the northward undercurrent. The internal radius of deformation separates the upwelling area from the offshore area as well as different water masses. Mekong River and the Gulf of Thailand waters which are offshore show nutrient depletion. Therefore, high chlorophyll maxima cannot be explained by nutrient supply from river runoff. The dynamical upwelling brings in nutrient-rich Maximum Salinity Water into the euphotic zone. This causes a subsurface chlorophyll maximum between 20 and 40 m water depth along the northward undercurrent. Deflection from the Redfield ratio in the C:N ratio and negative excess nitrogen identifies the region as nitrogen-limited which may favor cyanobacteria blooms. The consequence is a unique feature in new production: in the upwelling area, new production is based on upwelled nitrate, whereas offshore in the nutrient-depleted Mekong and Gulf of Thailand water, new production is based in addition on nitrogen fixation.     

Long cores from small lakes—recovering up to 100 m-long lake sediment sequences with a high-precision rod-operated piston corer (Usinger-corer)

We present a unique, versatile piston corer for recovering continuous lake and bog sediment sequences with superior accuracy and quality. The main components of the system and their function are described, with special focus on measures for obtaining long, continuous lake sediment sections up to a current maximum length of 95 m. Examples of lake sediment profiles obtained with this system from different climatic zones are presented.     

Syngenetic, thin graphite-rich horizons in lower crustal rocks from the Serre San Bruno, Calabria (Italy), and implications for the nature of high-conducting deep crustal layers

In order to better understand the nature of deep crustal high electrical conductivity, we studied the electrical properties of a tilted section of a former lower continental crust exposed in the Calabrian arc of the Alpine-Apennine mountain system. Geoelectric field measurements and impedance measurements on rock samples showed that these high-grade metamorphic rocks are generally highly resistive as expected for crystalline, electrolytically conducting rocks of low porosity. This holds for graphite-free metabasites as well as for metapelites which generally contain accessory, up to 3% biogenic graphite in the form of isolated grains. Clearly as an exception, a group of thin stratiform black horizons with thicknesses of 1-15 cm within the metapelitic series was detected by means of self-potential (SP) measurements. Rock samples from these horizons exhibit high, quasi-metallic bulk conductivities of up to 50 S/m (0.02 Ωm) in agreeement with up to 20% syngenetic graphite, forming a network of interconnected streaks or crack fillings. The high amount of carbon most probably originates from organic matter of C_org-rich black shales. Relative enrichment of the low mobility graphitic matter compared to the carbon content of the assumed protoliths may have been due to pressure solution and partial melting during prograde metamorphism, without major contribution of a fluid phase, resulting in isolated graphite flakes. Although enriched, graphite in this form has little effect on electrical conductivity. For the Calabrian black horizons, microscopic analyses make conceivable that, in a further decisive step, isolated graphite grains were mechanically smeared to continuous pathways during uplift by shearing, producing hereby the observed graphitic network which is needed to generate high conductivity. As C_org-rich black shales are common members of sedimentary sequences throughout the earth’s history, good conductors of this type may be expected in the continental crust at any depth depending on tectonic and metamorphic history, with the exception of magmatic protoliths. Regarding the extremely high conductivity of the meta-black shale samples containing syngenetic sheared graphite, a total thickness of a few meters of such rocks is sufficient to explain magnetotelluric high conductivity anomalies in the deep crust.     

Pelagic ciliates (Protozoa, Ciliophora) of different brackish and freshwater lakes — a community analysis at the species level

The pelagic ciliate communities from 58 north German lakes differing in their origin (natural lakes and artificial ponds), morphology (from shallow ponds with a maximum depth of below 0.5 m to relatively deep lakes with a maximum depth of more than 10 m, surface areas from below 10 ha to more than 100 ha), trophic state (from mesotrophic to hypertrophic) and salinity (freshwater lakes and brackish water lakes) are described and compared at species level. Each lake was comprehensively sampled quarterly in the years 1996 and 1997, respectively. Applying a quantitative protargol stain, about 140 ciliate species could be identified and quantified in all investigated lakes. 35 species, mainly members of the Prostomatida and Oligotrichida, were found commonly in all types of lakes at all seasons and dominated the pelagic ciliate communities. 3 species were common in freshwaters, but never occurred in brackish lakes. In the brackish waters a mixture of common freshwater species and marine species was found with 13 species exclusively occurring in brackish waters. Lowest ciliate cell numbers were observed for deep freshwater lakes, highest cell numbers were determined for brackish waters. Highest species richness was found in artificial peat ponds with an average of 24 pelagic ciliate species in spring samples. The range of occurrence for the identified species was wide for most common species. However, the influence of some environmental factors could be enlightened.