Variable Nitrification Rates Across Environmental Gradients in Turbid,Nutrient-Rich Estuary Waters of San Francisco Bay

Understanding rates of nitrogen cycling in estuaries is crucial for understanding their productivity and resilience to eutrophication. Nitrification, the microbial oxidation of ammonia to nitrite and nitrate, links reduced and oxidized forms of inorganic nitrogen and is therefore an important step of the nitrogen cycle. However, rates of nitrification in estuary waters are poorly characterized. In fall and winter of 2011–2012, we measured nitrification rates throughout the water column of all major regions of San Francisco Bay, a large, turbid, nutrient-rich estuary on the west coast of North America. Nitrification rates were highest in regions furthest from the ocean, including many samples with rates higher than those typically measured in the sea. In bottom waters, nitrification rates were commonly at least twice the magnitude of surface rates. Strong positive correlations were found between nitrification and both suspended particulate matter and ammonium concentration. Our results are consistent with previous studies documenting high nitrification rates in brackish, turbid regions of other estuaries, many of which also showed correlations with suspended sediment and ammonium concentrations. Overall, nitrification in estuary waters appears to play a significant role in the estuarine nitrogen cycle, though the maximum rate of nitrification can differ dramatically between estuaries.     

Isolation,biodegradation ability and molecular detection of hydrocarbon degrading bacteria in petroleum samples from a Brazilian offshore basin

The detection of microorganisms with potential for biodeterioration and biodegradation in petroleum fields is of great relevance, since these organisms may be related to a decrease in petroleum quality in the reservoirs or damage in the production facilities. In this sense, petroleum formation water and oil samples were collected from the Campos Basin, Brazil, with the aim of isolating microorganisms and evaluating their ability to degrade distinct classes of hydrocarbon biomarkers (9,10-dihydrophenanthrene, phytane, nonadecanoic acid and 5α-cholestane). Twenty eight bacterial isolates were recovered and identified by sequencing their 16S rRNA genes. Biodegradation assays revealed that bacterial metabolism of hydrocarbons occurred through reactions based on oxidation, carbon–carbon bond cleavage and generation of new bonds or by the physical incorporation of hydrocarbons into microbial cell walls. Based on the biodegradation results, selective PCR-based systems were developed for direct detection in petroleum samples of bacterial groups of interest, namely Bacillus spp., Micrococcus spp., Achromobacter xylosoxidans, Dietzia spp. and Bacillus pumilus. Primer sets targeting 16S rRNA genes were designed and their specificity was confirmed in silico (i.e. computational analysis) and in PCR reactions using DNA from reference strains as positive and negative controls. Total DNA from oil was purified and the amplification tests revealed the presence of the target bacteria in the samples, unraveling a significant potential for petroleum deterioration in the reservoirs sampled, once proper conditions are present for hydrocarbon degradation. The application of molecular methods for rapid detection of specific microorganisms in environmental samples would be valuable as a supporting tool for the evaluation of oil quality in production reservoirs.     

Recent temperature and precipitation increases in West Siberia and their association with the Arctic Oscillation

Surface air temperature and precipitation records for the years 1958-1999 from ten meteorological stations located throughout West Siberia are used to identify climatic trends and determine to what extent these trends are potentially attributable to the Arctic Oscillation (AO). Although recent changes in atmospheric variability are associated with broad Arctic climate change, West Siberia appears particularly susceptible to warming. Furthermore, unlike most of the Arctic, moisture transport in the region is highly variable. The records show that West Siberia is experiencing significant warming and notable increases in precipitation, likely driven, in part, by large-scale Arctic atmospheric variability. Because this region contains a large percentage of the world's peatlands and contributes a significant portion of the total terrestrial freshwater flux to the Arctic Ocean, these recent climatic trends may have globally significant repercussions. The most robust patterns found are strong and prevalent springtime warming, winter precipitation increases, and strong association of non-summer air temperatures with the AO. Warming rates for both spring (0.5-0.8 °C/decade) and annual (0.3-0.5°C/decade) records are statistically significant for nine often stations. On average, the AO is linearly congruent with 96% (winter), 19% (spring), 0% (summer), 67% (autumn) and 53% (annual) of the warming found in this study. Significant trends in precipitation occur most commonly during winter, when four of ten stations exhibit significant increases (4-13 %/decade). The AO may play a lesser role in precipitation variability and is linearly congruent with only 17% (winter), 13% (spring), 12% (summer), 1% (autumn) and 26% (annual) of precipitation trends.     

It starts at home? Climate policies targeting household consumption and behavioral decisions are key to low-carbon futures

Through their consumption behavior, households are responsible for 72% of global greenhouse gas emissions. Thus, they are key actors in reaching the 1.5 °C goal under the Paris Agreement. However, the possible contribution and position of households in climate policies is neither well understood, nor do households receive sufficiently high priority in current climate policy strategies. This paper investigates how behavioral change can achieve a substantial reduction in greenhouse gas emissions in European high-income countries. It uses theoretical thinking and some core results from the HOPE research project, which investigated household preferences for reducing emissions in four European cities in France, Germany, Norway and Sweden. The paper makes five major points: First, car and plane mobility, meat and dairy consumption, as well as heating are the most dominant components of household footprints. Second, household living situations (demographics, size of home) greatly influence the household potential to reduce their footprint, even more than country or city location. Third, household decisions can be sequential and temporally dynamic, shifting through different phases such as childhood, adulthood, and illness. Fourth, short term voluntary efforts will not be sufficient by themselves to reach the drastic reductions needed to achieve the 1.5 °C goal; instead, households need a regulatory framework supporting their behavioral changes. Fifth, there is a mismatch between the roles and responsibilities conveyed by current climate policies and household perceptions of responsibility. We then conclude with further recommendations for research and policy.     

A search for amino acids and nucleobases in the Martian meteorite Roberts Massif 04262 using liquid chromatography‐mass spectrometry

The investigation into whether Mars contains signatures of past or present life is of great interest to science and society. Amino acids and nucleobases are compounds that are essential for all known life on Earth and are excellent target molecules in the search for potential Martian biomarkers or prebiotic chemistry. Martian meteorites represent the only samples from Mars that can be studied directly in the laboratory on Earth. Here, we analyzed the amino acid and nucleobase content of the shergottite Roberts Massif (RBT) 04262 using liquid chromatography‐mass spectrometry. We did not detect any nucleobases above our detection limit in formic acid extracts; however, we did measure a suite of protein and nonprotein amino acids in hot‐water extracts with high relative abundances of β‐alanine and γ‐amino‐n‐butyric acid. The presence of only low (to absent) levels of several proteinogenic amino acids and a lack of nucleobases suggest that this meteorite fragment is fairly uncontaminated with respect to these common biological compounds. The distribution of straight‐chained amine‐terminal n‐ω‐amino acids in RBT 04262 resembled those previously measured in thermally altered carbonaceous meteorites (Burton et al. 2012; Chan et al. 2012). A carbon isotope ratio of ?24‰ ± 6‰ for β‐alanine in RBT 04262 is in the range of reduced organic carbon previously measured in Martian meteorites (Steele et al. 2012). The presence of n‐ω‐amino acids may be due to a high temperature Fischer‐Tropsch‐type synthesis during igneous processing on Mars or impact ejection of the meteorites from Mars, but more experimental data are needed to support these hypotheses.     

Actinian dominated intertidal mudflats: A new case of an extraordinary rare phenomenon from Southern Chile

Generally, estuarine intertidal mudflats constitute important nurseries for fish and foraging grounds for coastal birds by providing a plenitude of mollusks, worms, and crustaceans as prey, which in turn mostly feed on suspended and benthic microalgae, bacteria, and detritus. Despite the high productivity of such habitats, pronounced variability in both salinity and temperature results typically in low diversity. The only sea anemone reported from estuarine mud is the edwardsiid Nematostella vectensis Stephenson, 1935. It occurs widely in the northern hemisphere, and occasionally in extremely high density. Here we document another sea anemone from estuarine mud and muddy sand found in Southern Chile which has similar ecological attributes. Taxonomic confusion has impeded the reporting on this small but prominent member in a macrozoobenthic assemblage, the brooding Anthopleura hermaphroditica (Carlgren, 1899; Anthozoa: Actiniidae). It differs from N. vectensis by the presence of symbiotic algae. Average density under poly- to euhaline conditions in mud and muddy sand at around mid tide level was about 3 actinians per cm². An average abundance of 11,000 m^? 2, a biovolume of 487 cm³ m^? 2, and a biomass of 35.5 g dry organic weight m^? 2 were found in mud and muddy sand in two surveys 20 years apart. The mean fishing area of fully expanded individuals covers 42 ± 25 mm², corresponding to a circular area with a diameter of 7.3 ± 5.7 mm. Preliminary experiments indicate that associated benthos may be relegated to life below surface by the net of tentacles above the sediment. As no predators on A. hermaphroditica could be found on the mudflat, the success of this mixotrophic sea anemone may entail a trophic dead end.     

Strength of the lithosphere of the Galilean satellites

Several approaches have been used to estimate the ice shell thickness on Callisto, Ganymede, and Europa. Here we develop a method for placing a strict lower bound on the thickness of the strong part of the shell (lithosphere) using measurements of topography. The minimal assumptions are that the strength of faults in the brittle lithosphere is controlled by lithostatic pressure according to Byerlee's law and the shell has relatively uniform density and thickness. Under these conditions, the topography of the ice provides a direct measure of the bending moment in the lithosphere. This topographic bending moment must be less than the saturation bending moment of the yield strength envelope derived from Byerlee's law. The model predicts that the topographic amplitude spectrum decreases as the square of the topographic wavelength. This explains why Europa is rugged at shorter wavelengths (∼10 km) but extremely smooth, and perhaps conforming to an equipotential surface, at longer wavelengths (>100 km). Previously compiled data on impact crater depth and diameter [Schenk, P.M., 2002. Nature 417, 419-421] on Europa show good agreement with the spectral decrease predicted by the model and require a lithosphere thicker than 2.5 km. A more realistic model, including a ductile lower lithosphere, requires a thickness greater than 3.5 km. Future measurements of topography in the 10-100 km wavelength band will provide tight constraints on lithospheric strength.     

The water impacts of climate change mitigation measures

A variety of proposed activities to mitigate greenhouse gas emissions will impact on scarce water resources, which are coming under increasing pressure in many countries due to population growth and shifting weather patterns. However, the integrated analysis of water and carbon impacts has been given limited attention in greenhouse mitigation planning. In this Australian case study, we analyse a suite of 74 mitigation measures ranked as highest priority by one influential analysis, and we find that they have highly variable consequences for water quantity. We find: (1) The largest impacts result from land-based sequestration, which has the potential to intercept large quantities of water and reduce catchment yields, estimated to exceed 100 Mm³/MtCO₂-e of carbon mitigated (100,000 l per tonne CO₂-e). (2) Moderate impacts result from some renewable power options, including solar thermal power with a water cost estimated at nearly 4 Mm³/MtCO₂-e. However, the water impacts of solar thermal power facilities could be reduced by designing them to use existing power-related water supplies or to use air or salt-water cooling. (3) Wind power, biogas, solar photovoltaics, energy efficiency and operational improvements to existing power sources can reduce water demand through offsetting the water used to cool thermal power generation, with minor savings estimated at 2 Mm³/MtCO₂-e and amounting to nearly 100 Mm³ of water saved in Australia per annum in 2020. This integrated analysis significantly changes the attractiveness of some mitigation options, compared to the case where water impacts are not considered.     

Climate-smart agriculture: perspectives and framings

This paper offers a systematic analysis of the concepts and contexts that frame the climate-smart agriculture (CSA) discourse in the academic and policy literature. Documents (n?=?113) related to CSA and published in peer-reviewed journals, books, working papers, and scientific reports from 2004 to 2016 were reviewed. Three key trends emerged from the analysis: studies are biased towards global policy agendas; research focuses on scientific and technical issues; and the integration of mitigation, adaptation, and food security (the three pillars of CSA) is becoming a popular scholarly solution. Findings suggest that CSA is a fairly new concept used to describe a range of adaptation and mitigation practices without a specific set of criteria. Although CSA is often framed around the three pillars, the underlying issues constructing the discourse differ at global, developing, and developed country scales. Although there is increasing research on developing countries, particularly in relation to how CSA can transform smallholder agriculture, there is a paucity of research documenting the experiences from developed countries. The findings suggest that research on CSA needs to move beyond solely focussing on scientific approaches and only in certain geographical contexts. If CSA is to be applicable for farmers across the globe, then cross-disciplinary research that is underpinned by broad socio-economic and political contexts is essential to understand how differences in narratives might affect implementation on-the-ground in both developing and developed countries.

POLICY RELEVANCE

Although policy makers are increasingly supportive of the climate-smart agriculture (CSA) approach, the rhetoric has largely been developed on the basis of scientific and technical arguments. The political implications of varying perspectives have resulted in a growing divide between how developing and developed countries frame solutions to the impacts of climate change on agriculture under the 2015 Paris Agreement. Different framings are part of the explanation for why the scope of CSA is being rethought, with the scientific community redirecting attention to seeking a separate work programme under the United Nations Framework Convention on Climate Change (UNFCCC). The current policy framing of CSA will give no new policy direction unless it grounds itself in the smallholder farmer and civil society contexts.