Oxidative damage to DNA: an immunohistochemical approach for detection of 7,8-dihydro-8-oxodeoxyguanosine in marine organisms

The modified nucleoside 7,8-dihydro-8-oxodeoxyguanosine (8-oxo-dG) is an index of oxidative DNA damage. An immunohistochemical approach based on the use of monoclonal antibody 1F7 against 8-oxo-dG was investigated in marine organisms with immunoperoxidase and immunofluorescent detection. Relative staining intensity as a measure of the 8-oxo-dG level was microscopically assessed. After laboratory exposures to benzo[a]pyrene (B[a]P), higher levels of oxidative DNA damage were clearly detected in all treated animals compared to controls. While this method eliminates DNA extraction reducing the processing of biological samples, absolute values are not provided. Further, the method requires only small amounts of tissue and potentially discriminates susceptibility to oxidative damage in different cell types. These results suggest that the assay should have practical applications in marine ecotoxicology.     

Antioxidant efficiency and detoxification enzymes in spotted dogfish Scyliorhinus canicula

Although elasmobranchs are widely distributed species, commonly found on sandy, gravely or muddy bottoms, several biological aspects of their metabolism still remain poorly investigated. In this work the efficiency of antioxidant system and detoxification enzymes were investigated in the coastal spotted dogfish Scyliorhinus canicula and in the red mullet Mullus barbatus for comparison with a teleost species. Organisms were sampled during a bottom trawl survey and analyzed for the biotransformation activity (EROD), levels of metallothioneins, catalase, glutathione S-transferases and total oxyradical scavenging capacity (TOSC) toward peroxyl radicals and hydroxyl radicals. EROD activity in the elasmobranchs was more than one order of magnitude lower than in the red mullets, while similar levels of metallothioneins were measured in these species. S. canicula showed significantly lower antioxidant enzymes and a more reduced efficiency in neutralizing *OH; on the other hand the scavenging capability toward ROO* was comparable in S. canicula and M. barbatus.     

Disturbance and Community Pattern of Polychaetes Inhabiting Valle Magnavacca (Valli di Comacchio,Northern Adriatic Sea,Italy)

Abstract. Polychaete community structure in Valle Magnavacca, the largest basin of the Valli di Comacchio (Northern Adriatic Sea) lagoonal ecosystem, was analyzed in a three‐year study. Three shallow‐water stations were sampled at about 3‐month intervals. Univariate and multivariate analyses were utilized to investigate community structure changes in relation to natural and man‐induced disturbance. The polychaete community at station 3, in the central area of the lagoon, was the most disturbed, while that of station 2 was the most well structured. We hypothesize that polychaete community structure results from regular seasonal disturbances which lead to almost predictable fluctuations in species abundance. Superimposed on these regular cycles are acute disturbance events that further reduce species abundance or exclude species from the habitat.     

Wave-height distributions and nonlinear effects

Theoretical distributions proposed for describing the crest-to-trough heights of linear waves are reviewed briefly. To explore the effects of nonlinearities, these are generalized to second-order waves, utilizing quasi-deterministic results on the expected shape of large waves. The efficacy of Gram–Charlier models in describing the effects of third-order nonlinearities on the distributions of wave heights, crests and troughs are examined in detail. All models and a fifth-order Stokes–Rayleigh type model recently proposed are compared with linear and nonlinear waves simulated from the JONSWAP spectrum representative of long-crested extreme seas, and also with oceanic data gathered in the North Sea. Uncertainties arising from the variability of probability estimates derived from sample populations of limited size are considered. Ultimately, the comparisons show that nonlinearities do not have any discernable effect on the crest-to-trough heights of oceanic waves. Most of the linear models considered yield similar and reasonable predictions of the observed data trends. Gram–Charlier type distributions seem neither effective nor particularly useful in describing the statistics of large wave heights or crests under oceanic conditions. However, they do surprisingly well in predicting unusually large wave heights and crests observed in some 2D wave-flume experiments and 3D numerical simulations of long-crested narrow-band random waves.     

Natural hexavalent chromium in groundwaters interacting with ophiolitic rocks

Thirty of the 58 groundwaters sampled in September-October 2000 in the study area (La Spezia Province, Italy) have Mg-HCO₃ to Ca-HCO₃ composition, undetectable Cr(III) contents, and virtually equal concentrations of total dissolved Cr and Cr(VI). Therefore, dissolved Cr is present in toto as Cr(VI), with concentrations of 5-73 ppb. These values are above the maximum permissible level for drinking waters (5 ppb). Local ophiolites, especially serpentinites and ultramafites, are Cr-rich and represent a Cr source for groundwaters. However, since Cr is present as Cr(III) in rock-forming minerals, its release to the aqueous solution requires oxidation of Cr(III) to Cr(VI). This can be performed by different electron acceptors, including Mn oxides, H₂O₂, gaseous O₂, and perhaps Fe(III) oxyhydroxides. Based on this evidence and due to the absence of anthropogenic Cr sources, the comparatively high Cr(VI) concentrations measured in the waters of the study area are attributed to natural pollution.     

Multi-methodological investigation of kunzite, hiddenite, alexandrite, elbaite and topaz, based on laser-induced breakdown spectroscopy and conventional analytical techniques for supporting mineralogical characterization

Gem-quality alexandrite, hiddenite and kunzite, elbaite and topaz minerals were characterized through a multi-methodological investigation based on EMPA-WDS, LA-ICP-MS, and laser-induced breakdown spectroscopy (LIBS). With respect to the others, the latter technique enables a simultaneous multi-elemental composition without any sample preparation and the detection of light elements, such as Li, Be and B. The criteria for the choice of minerals were: (a) the presence of chromophore elements in minor contents and/or as traces; (b) the presence of light lithophile elements (Li, Be and B); (c) different crystal chemistry complexity. The results show that LIBS can be employed in mineralogical studies for the identification and characterization of minerals, and as a fast screening method to determine the chemical composition, including the chromophore and light lithophile elements.     

A thermo‐mechanical model for the catastrophic collapse of large landslides

In this work, a new thermo‐mechanical model is developed, applicable to large‐scale, deep‐seated landslides consisting of a coherent mass sliding on a thin clayey layer. The considered time window is that of catastrophic acceleration, starting at incipient failure and ending when the acquired displacement and velocity are such that the sliding material begins to break up into pieces. The model accounts for temperature rise in the slip zone due to the heat produced by friction, leading to water expansion, thermoplastic collapse of the soil skeleton, and subsequent increase of pore water pressure. The model incorporates the processes of heat production and diffusion, pore pressure generation and diffusion, and an advanced constitutive law for the thermo‐mechanical behavior of soil. An analysis of the Vajont landslide is presented as an example. A sensitivity analysis shows that friction softening is the mechanism most affecting the timescale of the final collapse of a slide, but also that the mechanism of thermal pressurization alone can cause a comparably catastrophic dynamic evolution. It is also shown that, all other factors being equal, thermo‐mechanical collapse will cause thicker slides to accelerate faster than shallow ones. Copyright © 2010 John Wiley & Sons, Ltd.     

Detection of Miocene saucer‐shaped sills (offshore Senegal) via integrated interpretation of seismic,magnetic and gravity data

The Atlantic margin offshore Senegal has been explored by seismic reflection and GRAV‐MAG surveys. High‐amplitude, laterally transgressive seismic reflectors are found to coincide with gravimetric and magnetic highs. Once seismic data are integrated with potential fields modelling, these reflectors can be safely interpreted as saucer‐shaped igneous sills, up to some hundreds of metres thick, some km wide. The occurrence of hydrothermal vent complexes and forced folds in the stratigraphic sequence above the sills constrain the intrusion age to the Miocene. Field observations and in‐situ magnetic susceptibility measurements of Oligocene–Miocene and Quaternary igneous rocks emplaced in coastal Senegal support this interpretation.     

From river to shelf,anatomy of a high‐frequency depositional sequence: The Late Pleistocene to Holocene Tiber depositional sequence

The Late Pleistocene/Holocene Tiber delta succession represents the most recent and one of the best preserved, high‐frequency/low‐rank depositional sequences developed along the Latium continental margin of the Italian peninsula. Several previous studies have established a robust data set from which it has been possible to describe the stratigraphic architecture of the entire Tiber depositional sequence from the landward to seaward sectors and over a distance of 60 km. The Tiber depositional sequence shows many characteristics found in other Late Pleistocene to Holocene deltaic and coastal successions of the Mediterranean area. The stratigraphic architecture of the Tiber depositional sequence is controlled mainly by glacioeustasy, although factors such as tectonic uplift, volcanism and subsidence, exert an influence at a local scale. The resulting depositional model allowed discussion of some important points such as: (1) the genesis of the Tiber mixed bedrock‐alluvial valley, extending from the coastal plain to the innermost portion of the shelf, recording (i) multiple episodes of incision during relative sea‐level fall, and (ii) a downstream increase of depth and width of the valley during the base‐level fall and the subsequent base‐level rise; (2) the different physical expression of the Tiber depositional sequence boundary from landward to seaward, and its diachronous and composite character; (3) the maximum depth reached by the Tiber early lowstand delta at the end of the sea‐level fall is estimated at ca 90 m below the present sea‐level and not at 120 m as suggested by previous works; (4) the backward position of the Tiber late lowstand delta relative to the deposit of early lowstand; (5) the change of the channel pattern and of the stacking pattern of fluvial deposits within the Lowstand Systems Tract, Transgressive Systems Tract and Highstand Systems Tract. All of these features indicate that the Late Pleistocene/Holocene Tiber delta succession, even if deposited in a short period of time from a geological point of view, represents the result of the close interaction among many autogenic and allogenic factors. However, global eustatic variations and sediment supply under the control of climatic changes can be considered the main factors responsible for the stratigraphic architecture of this sedimentary succession, which has been heavily modified by human activity only in the last 3000 years.