A Hybrid Geocoding Methodology for Spatio‐Temporal Data

As tools for collecting data continue to evolve and improve, the information available for research is expanding rapidly. Increasingly, this information is of a spatio‐temporal nature, which enables tracking of phenomena through both space and time. Despite the increasing availability of spatio‐temporal data, however, the methods for processing and analyzing these data are lacking. Existing geocoding techniques are no exception. Geocoding enables the geographic location of people and events to be known and tracked. However, geocoded information is highly generalized and subject to various interpolation errors. In addition, geocoding for spatio‐temporal data is especially challenging because of the inherent dynamism of associated data. This article presents a methodology for geocoding spatio‐temporal data in ArcGIS that utilizes several additional supporting procedures to enhance spatial accuracy, including the use of supplementary land use information, aerial photographs and local knowledge. This hybrid methodology allows for the tracking of phenomenon through space and over time. It is also able to account for reporting inconsistencies, which is a common feature of spatio‐temporal data. The utility of this methodology is demonstrated using an application to spatio‐temporal address records for a highly mobile group of convicted felons in Hamilton County, Ohio.     

Relative risk assessment of cruise ships biosolids disposal alternatives

A relative risk assessment of biosolids disposal alternatives for cruise ships is presented in this paper. The area of study encompasses islands and marine waters of the Caribbean Sea. The objective was to evaluate relative human health and ecological risks of (a) dewatering/incineration, (b) landing the solids for disposal, considering that in some countries land-disposed solids might be discharged in the near-shore environment untreated, and (c) deep ocean disposal. Input to the Bayesian assessment consisted of professional judgment based on available literature and modeling information, data on constituent concentrations in cruise ship biosolids, and simulations of constituent concentrations in Caribbean waters assuming ocean disposal. Results indicate that human health and ecological risks associated with land disposal and shallow ocean disposal are higher than those of the deep ocean disposal and incineration. For incineration, predicted ecological impacts were lower relative to deep ocean disposal before considering potential impacts of carbon emissions.     

Effects of anthropogenic disturbance on the abundance and size of epibenthic jellyfish Cassiopea spp

Jellyfish blooms in pelagic systems appear to be increasing on a global scale because of anthropogenic impacts, but much less is known about the link between human activities and epibenthic jellyfish abundance. The aim of this study was to investigate whether the epibenthic jellyfish, Cassiopea spp., were found in greater abundance, and attained larger sizes, in coastal habitats adjacent to high human population densities compared to sites adjacent to uninhabited areas on Abaco Island, Bahamas. Cassiopea spp. were found to be significantly more dense and larger in areas with high human population densities. Ambient nutrient levels and nutrient content of seagrass were elevated in high human population density sites, and may be one mechanism driving higher abundance and size of Cassiopea spp. Cassiopea spp. may have important effects on community structure and ecosystem function in critical coastal ecosystems (e.g., seagrass beds), and their impacts warrant further study.     

Comparison of Enterococcus density estimates in marine beach and bay samples by real-time polymerase chain reaction, membrane filtration and defined substrate testing

Currently, densities of Enterococcus in marine bathing beach samples are performed using conventional methods which require 24 h to obtain results. Real-time PCR methods are available which can measure results in as little as 3 h. The purpose of this study was to evaluate a more rapid test method for the determination of bacterial contamination in marine bathing beaches to better protect human health. The geometric mean of Enterococcus densities using Enterolert® defined substrate testing and membrane filtration ranged from 5.2 to 150 MPN or CFU/100 mL and corresponding qPCR results ranged from 6.6 to 1785 CCE/100 mL. The regression analysis of these results showed a positive correlation between qPCR and conventional tests with an overall correlation (r) of 0.71. qPCR was found to provide accurate and sensitive estimate of Enterococcus densities and has the potential to be used as a rapid test method for the quantification of Enterococcus in marine waters.     

Evaluation of microbiological water quality in the Pettaquamscutt River (Rhode Island, USA) using chemical, molecular and culture-dependent methods

We evaluated microbiological water quality in the Pettaquamscutt River (Rhode Island, USA), an estuarine river. Fecal coliform (FC) and enterococci (FE) bacteria, presence of Bifidobacterium adolescentis DNA (indicating human fecal contamination), and optical brightener (OB) fluorescence (associated with laundry detergents) were determined for 14 stations from May to September 2010. Six stations had high counts of FE and FC, and the presence of B. adolescentis DNA and high OB fluorescence indicated human fecal contamination - four had septic systems as likely sources of contamination; the others were in sewered areas. The ability of FC and FE to indicate human fecal contamination was assessed against a positive B. adolescentis test. FC and FE had false positive rates of 25% and 17%, respectively, and false negatives of 44% for FC and 63% for FE. Inclusion of molecular and chemical indicators should improve tracking of human fecal contamination sources in the river.     

Effect of organic matter source and salinity on dissolved organic matter isolation via ultrafiltration and solid phase extraction

In this study, samples were taken from three contrasting freshwater sources and amended with salt in order to determine the influence of salinity and dissolved organic matter (DOM) composition on DOM recovery via ultrafiltration and solid phase extraction (SPE) with C₁₈ disks. Salt addition caused variable recovery of DOM when using C₁₈ SPE, and ultraviolet–visible spectroscopic characterization of the extracted material showed spectral responses that varied among sample sources. In contrast, increasing sample salinity from 0 to 30 ppt consistently caused a 15–25% reduction in the amount of high molecular weight DOM isolated by ultrafiltration for both dissolved organic carbon (DOC) and chromophoric DOM (CDOM), regardless of DOM composition. We hypothesize that a change in conformation (such as coiling or disaggregation) of DOM molecules occurs in the presence of salt, allowing them to pass through the ultrafiltration membrane and thereby decreasing the DOM retained by ultrafiltration. These results are important because they demonstrate that changes in salinity can influence DOM recovery in estuaries. Interpretation of DOM characteristics along estuarine gradients needs to account for potential artifacts introduced by sample isolation techniques.     

A Review of Higher Order Ionospheric Refraction Effects on Dual Frequency GPS

Higher order ionospheric effects are increasingly relevant as precision requirements on GPS data and products increase. The refractive index of the ionosphere is affected by its electron content and the magnetic field of the Earth, so the carrier phase of the GPS L1 and L2 signals is advanced and the modulated code delayed. Due to system design the polarisation is unaffected. Most of the effect is removed by expanding the refractive index as a series and eliminating the first term with a linear combination of the two signals. However, the higher order terms remain. Furthermore, transiting gradients in refractive index at a non-perpendicular angle causes signal bending. In addition to the initial geometric bending term, another term allows for the difference that the curvature makes in electron content along each signal. Varying approximations have been made for practical implementation, mainly to avoid the need for a vertical profile of electron density. The magnetic field may be modelled as a tilted co-centric dipole, or using more realistic models such as the International Geomagnetic Reference Field. The largest effect is from the second term in the expansion of the refractive index. Up to several cm on L2, it particularly affects z-translation, and satellite orbits and clocks in a global network of GPS stations. The third term is at the level of the errors in modelling the second order term, while the bending terms appear to be absorbed by tropospheric parameters. Modelling improvements are possible, and three frequency transmissions will allow new possibilities.     

Archaeol as a methanogen biomarker in ombrotrophic bogs

In order to develop new tools in the reconstruction of microbiological processes in ancient continental settings, we determined the concentration of archaeol and sn-2-hydroxyarchaeol in four Holocene ombrotrophic peatlands, spanning a range of European climate zones. Neither ether lipid was present in the aerobic acrotelm peat, consistent with an origin from anaerobic archaea, presumably methanogens. At the depth of the maximum seasonal water table, archaeol and sn-2-hydroxyarchaeol concentration markedly increased at all four sites, again consistent with an anaerobic source, but differed strongly among sites. The differences apparently reflect a combination of vegetation - ericaceous and graminoid plants as opposed to Sphagnum spp. and other mosses lacking root systems - and temperature influence on methanogenesis. In particular, low ether lipid concentrations in Finland probably reflect the lack of vascular vegetation possessing well-developed root systems, together with low mean annual temperature. Similarly low concentrations of archaeol and sn-2-hydroxyarchaeol in a German bog likely result from winter temperatures below 0 °C and a relatively shorter growing season. The occurrence of sn-2-hydroxyarchaeol is limited to a narrow and shallow depth range, indicating that it is poorly preserved, but archaeol persists throughout the cores. Decoupling the concentration of archaeol and the more labile sn-2-hydroxyarchaeol below ca. 50 cm suggests that the former records fossil biomass rather than living biomass. If so, then downcore variation in archaeol concentration likely reflects past changes in methane cycling, and archaeol, pending further developmental research, could serve as a new tool for reconstruction of past peatland biogeochemistry.     

Pyrolysis GC-MS as a rapid screening tool for determination of peat-forming plant composition in cores from ombrotrophic peat

Peat cores provide decadal to centennial records of climatic and environmental change, including evidence for human/environment interaction. Existing palaeoenvironmental proxies (macrofossils, pollen, humification, testate amoebae, lipid composition) require multiple laboratory preparation steps and may be subject to differential preservation that can limit production of a continuous time series. The potential for pyrolysis gas-chromatography-mass-spectrometry (Py-GC-MS) to be applied to bulk peat samples is investigated here. The only preparatory step required was freeze drying. Analysis of a range of important peat-forming plants demonstrates that Sphagnum moss species are unique in containing the pyrolysis product of sphagnum acid, 4-isopropenylphenol. In contrast, non-Sphagnum species are rich in lignin pyrolysis products, which are absent from Sphagnum. The presence of these pyrolysis markers is reflected in bulk peat composition and tested here using archives from Bolton Fell Moss and Butterburn Flow (UK), Kontolanrahka (Finland) and Bissendorfer Moor (Germany). A ratio between 4-isopropenylphenol and two lignin pyrolysis products is proposed as a proxy for total Sphagnum input to peat archives and shows potential for use as a rapid screening tool for characterising bulk peat composition before more intensive analysis.     

Movement of manganese contamination through the Critical Zone

Humans have transferred large quantities of metals from the lithosphere to the Earth’s surface, drastically altering the natural flow of these elements. The geographic dispersal of many metals and their impacts on the environment are unknown. Here, existing datasets are compiled to assess how anthropogenic inputs of Mn to the air have altered soil and water chemistry over time. Although levels of Mn in the air have declined in recent decades, soils throughout the USA and Europe are enriched in Mn, revealing past contamination near zones of industrial input. Examination of river chemistry indicates a similar decline in Mn and can be used to evaluate the removal of Mn from soils. We use a small watershed, the Susquehanna/Shale Hills Critical Zone Observatory, as a focus site to investigate geochemical mass balance models and find that rapid biocycling contributes to the retention of Mn in this affected ecosystem.