Geography and postgenomics: how space and place are the new DNA

For many geographers, postgenomics is a relatively new perspective on biological causality. It is a non-dualistic way to conceptualize DNA, genes and environment. It also presents an opportunity for a broad critical engagement with biology through geography’s insights into socionature and the fallacies of spatial inference. In postgenomics, mapping of the spatial and temporal contexts and circumstances surrounding DNA, rather than DNA sequence alone, has become prioritized. Consequently, scientific and economic value in postgenomics accrues through the enclosure and mapping of the ‘omes’. These include the more familiar epigenome and microbiome, but also the interactome, the phenome, and the exposome among many others. The omes represent the cartographic translation of biological spatialities that modify the outcomes of DNA sequence from within as well as from outside of human bodies. In this article, we show how postgenomics leverages this omic ontologicalization of space and puts it to productive use. Drawing upon recent studies of the human microbiome, we illustrate how problematic geographies of difference arise through the way this omic mapping unfolds.     

The difficult combination of renting and building a house in urban Ghana: analysing the perception of low and middle income earners in Accra

This study examines the experiences of low and middle income earners in urban Ghana in combining renting and self-building a house with their meagre income. Using a case study of 3 building sites in Accra, this study employs semi-structured interview guide to gather qualitative data from fifty respondents. The conclusion of this study is that improving housing career amidst other competing responsibilities in the life course pathways imposes stress and huge financial burden on households in a manner that they are compelled to forgo or cut down on non-housing consumption such as clothing, up-keep of in-laws, marriage, higher educational qualification and cars among others. This study recommends a revisit of the discussion on the enforcement of the provisions of the Rent Act, 1963 and consideration of the practice of rent deposit and monthly rent. Affordable housing finance options should be a priority of African governments and their development partners.     

Corrigendum to “Do cratons preserve evidence of stagnant lid tectonics?” [Geoscience Frontiers 9(2018) 3e17]

正The author sincerely regrets that a drafting error was not detected prior to publication and accepts full responsibility for this oversight.Figure 6 and the related graphical abstract showed the top of the mantle transition zone to be located at 440 km in depth.The correct depth is 410 km,as shown these corrected figures.Graphical abstract     

Do cratons preserve evidence of stagnant lid tectonics?

Evidence for episodic crustal growth extending back to the Hadean has recently prompted a number of numerically based geodynamic models that incorporate cyclic changes from stagnant lid to mobile lid tectonics. A large part of the geologic record is missing for the times at which several of these cycles are inferred to have taken place. The cratons, however, are likely to retain important clues relating to similar cycles developed in the Mesoarchean and Neoarchean. Widespread acceptance of a form of plate tectonics by ～3.2 Ga is not at odds with the sporadic occurrence of stagnant lid tectonics after this time. The concept of scale as applied to cratons, mantle plumes and Neoarchean volcanic arcs are likely to provide important constraints on future models of Earth's geodynamic evolution. The Superior Province will provide some of the most concrete evidence in this regard given that its constituent blocks may have been locked into a stagnant lid relatively soon after their formation and then assembled in the next global plate tectonic interval. Perceived complexities associated with inferred mantle plume — volcanic arc associations in the Superior Province and other cratons may be related to an over estimation of plume size. A possible stagnant lid episode between ～2.9 Ga and ～2.8 Ga is identified by previously unexplained lapses in volcanism on cratons, including the Kaapvaal, Yilgarn and Superior Province cratons. If real, then mantle dynamics associated with this episode likely eliminated any contemporaneous mantle plume incubation sites, which has important implications for widespread plumes developed at ～2.7 Ga and favours a shallow mantle source in the transition zone. The Superior Province provides a uniquely preserved local proxy for this global event and could serve as the basis for detailed numerical models in the future.     

Initial assessment of recharge areas for large karst springs: a case study from the central Zagros Mountains,Iran

Sousan Spring emerges from the Keyno Anticline, Zagros Mountains (Iran), and the mean annual discharge is ~24 m³/s. Geological and hydrochemical evaluations suggest that the spring recharge is from the limestone Ilam-Sarvak Formation (Cretaceous) but the Mafaroon Fault, a major thrust feature, influences the regional groundwater flow path by juxtaposing other strata. Geological, geochemical, stable isotope and water balance studies were employed to interpret this behavior. Using the isotope data, the sources and elevations of the recharge area were found. Temporal variations of the isotopic data were compared with variations of electrical conductivity (EC). Unexpectedly, high EC was associated with a relative increase of discharge and depletion of δ¹⁸O. Several hypotheses were investigated and approximate water balance studies employed for validation. It was found that an elongated catchment on the Keyno Anticline plus a lesser catchment on a pair of parallel anticlines recharge the aquifer. While the long groundwater flow path along the Keyno Anticline plus guidance by Mafaroon Fault and the adjacent Garou shaly strata lead to increased EC in the Sousan Spring at the end of the dry season, a flow pulse from two adjoining anticlines (Mahalbakh and Shirgoon) arrives at the same time to increase the discharge and deplete the δ¹⁸O signal. Apparently the spring did not experience true base flow conditions during the recorded hydrological year. Although the spring response to specific precipitation events was similar to typical karst aquifers, standard interpretation of recession curves and related coefficients will not be practical at Sousan.     

Seasonal Variation in Nekton Assemblages in Tidal and Nontidal Tributaries in a Barrier Island Lagoon System

Fish communities in tidal tributaries have received considerable attention, but the relative value of nontidal tributaries (having a tidal amplitude of <?5 cm) may represent an under-valued habitat. A multi-gear sampling approach was used to collect fish and macroinvertebrates from one tidal and two nontidal tributaries to describe and compare the respective nekton communities and habitat use patterns. Nekton communities in tidal and nontidal tributaries were markedly different even though habitats were similar (e.g., temperature, DO, depths, shoreline vegetation). While catch-per-unit-effort (CPUE) of estuarine-dependent species (e.g., red drum, spot, common snook) was lower in nontidal tributaries, the overall nekton CPUE was twice that of the tidal tributary, and the community was comprised mostly of freshwater marsh species (e.g., eastern mosquitofish, sailfin molly, bluefin killifish). Based on the life histories of the fishes that differed between tributary types, the proximity of coastal inlets and availability of effective larval transport mechanisms for estuarine-dependent species may be greater determinants of community differences than factors related to tributary size or shoreline habitat type. These results recognize smaller nontidal tributaries as undervalued nursery habitats and suggest the function as secondary nursery habitats is a critical service to the overall estuarine community.     

Displacement of a landslide retaining wall and application of an enhanced failure forecasting approach

The 10-mile Slide is contained within an ancient earthflow located in British Columbia, Canada. The landslide has been moving slowly for over 40 years, requiring regular maintenance work along where a highway and a railway track cross the sliding mass. Since 2013, the landslide has shown signs of retrogression. Monitoring prisms were installed on a retaining wall immediately downslope from the railway alignment to monitor the evolution of the retrogression. As of September 2016, cumulative displacements in the horizontal direction approached 4.5 m in the central section of the railway retaining wall. After an initial phase of acceleration, horizontal velocities showed a steadier trend between 3 and 9 mm/day, which was then followed by a second acceleration phase. This paper presents an analysis of the characteristics of the surface displacement vectors measured at the monitoring prisms. Critical insight on the behavior and kinematics of the 10-mile Slide retrogression was gained. An advanced analysis of the trends of inverse velocity plots was also performed to assess the potential for a slope collapse at the 10-mile Slide and to obtain further knowledge on the nature of the sliding surface.