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101.
102.
Bacteria appeared early in the evolution of cellular life on planet Earth, and therefore the universally essential genes or biological pathways found across bacterial domains may represent fundamental genetic or cellular systems used in early life. The essential genes and the minimal gene set required to support bacterial life have recently been experimentally and computationally identified. It is, however,still hard to estimate the ancient genes present in primitive cells compared to the essential genes in contemporary bacteria, because we do not know how ancestral primitive cells lived and proliferated, and therefore cannot directly evaluate the essentiality of the genes in ancestral primitive cells. The cell wall is normally essential for bacterial proliferation and cellular division of walled bacterial cells is normally highly controlled by the essential FtsZ cell division machinery. But, bacteria are capable of reverting to their cell wall deficient ancestral form, called the "L-form". Unlike "normal" cells, L-forms divide by a simple physical mechanism based on the effects of membrane dynamics, suggesting a mode of primitive proliferation before the appearance of the cell wall. In this review, we summarize the experimental and computational investigations of minimal gene sets and discuss the minimal cellular modules required to support the proliferation of primitive cells, based on L-form proliferation. 相似文献
103.
Operational Data Assimilation System for the Kuroshio South of Japan: Reanalysis and Validation 总被引:3,自引:5,他引:3
Masafumi Kamachi Tsurane Kuragano Hiroshi Ichikawa Hirohiko Nakamura Ayako Nishina Atsuhiko Isobe Daisuke Ambe Masazumi Arai Noriaki Gohda Satoshi Sugimoto Kumi Yoshita Toshiyuki Sakurai Francesco Uboldi 《Journal of Oceanography》2004,60(2):303-312
We describe an operational ocean data assimilation system for the Kuroshio and its validation using a nine-year reanalysis
(historical run from 1993 to 2001) dataset of upper-ocean state estimation in the North Pacific. The horizontal structure
of volume transport of the Ryukyu Current System (RCS) is shown from the reanalysis: The RCS is connected to the flow of the
subtropical gyre, and its volume transport gradually increases from south-east of Okinawa (5–10 Sv) to the east of Amami-Ohshima
Island (20 Sv). Comparing the reanalysis with independent observations on the southeast slope of the Amami-Ohshima Island
indicates that the root mean square differences (RMSDs) are 0.076 (0.037) m/s in the period of December 1998 to November 1999
(November 1999 to November 2000) respectively. The reanalysis field has a bias (3.1 Sv) of the volume transport of the RCS
and the RMSD (3.5 Sv) which is larger than the observed variability (2.81 Sv). Surface velocity and the Kuroshio axis south
of Japan are also examined. Comparison of the reanalysis and ADCP data gave maximum RMSD of 0.749 (0.271) m/s in the strong
(weak) current regions, respectively. The annual mean value of the axis error is 19 km in 1998. The RMSD of the error is at
most 50 km, in 294 cases in the observation period, which is smaller than the observed root mean square variability of the
axis (64 km).
This revised version was published online in July 2006 with corrections to the Cover Date. 相似文献
104.
Could tsunami risk be underestimated using core‐based reconstructions? Lessons from ground penetrating radar 下载免费PDF全文
Hiraku Takeda Kazuhisa Goto James Goff Hideaki Matsumoto Daisuke Sugawara 《地球表面变化过程与地形》2018,43(4):808-816
Where should we take cores for palaeotsunami research? It is generally considered that local depressions with low energy environments such as wetlands are one of the best places. However, it is also recognized that the presence or absence of palaeotsunami deposits (and their relative thickness) is highly dependent upon subsoil microtopography. In the beach ridge system of Ishinomaki Plain, Japan, several palaeotsunami deposits linked to past Japan Trench earthquakes have been reported. However, the number of palaeotsunami deposits reported at individual sites varies considerably. This study used ground penetrating radar (GPR) combined with geological evidence to better understand the relationship between palaeotopography and palaeotsunami deposit characteristics. The subsurface topography of the ~3000–4000 bp beach ridge was reconstructed using GPR data coupled with core surveys of the underlying sediments. We noted that the number (and thickness) of the palaeotsunami deposits inferred from the cores was controlled by the palaeotopography. Namely, a larger number of events and thicker palaeotsunami deposits were observed in depressions in the subsurface microtopography. We noted a total of three palaeotsunami deposits dated to between 1700 and 3000 cal bp , but they were only observed together in 11% of the core sites. This result is important for tsunami risk assessments that use the sedimentary evidence of past events because we may well be underestimating the number of tsunamis that have occurred. We suggest that GPR is an efficient and invaluable tool to help researchers identify the most appropriate places to carry out geological fieldwork in order to provide a more comprehensive understanding of past tsunami activity. Copyright © 2017 John Wiley & Sons, Ltd. 相似文献
105.
Tomoya Obase Daisuke Nakashima Tomoki Nakamura Keisuke Nagao 《Meteoritics & planetary science》2020,55(5):1031-1047
We measured concentrations and isotopic ratios of noble gases in the Rumuruti (R) chondrite Mount Prestrud (PRE) 95410, a regolith breccia exhibiting dark/light structures. The meteorite contains solar and cosmogenic noble gases. Based on the solar and cosmogenic noble gas compositions, we calculated a heliocentric distance of its parent body, a cosmic‐ray exposure age on the parent body regolith (parent body exposure age), and a cosmic‐ray exposure age in interplanetary space (space exposure age) of the meteorite. Assuming a constant solar wind flux, the estimated heliocentric distance was smaller than 1.4 ± 0.3 au, suggesting inward migration from the asteroid belt regions where the parent body formed. The largest known Mars Trojan 5261 Eureka is a potential parent body of PRE 95410. Alternatively, it is possible that the solar wind flux at the time of the parent body exposure was higher by a factor of 2–3 compared to the lunar regolith exposure. In this case, the estimated heliocentric distance is within the asteroid belt region. The parent body exposure age is longer than 19.1 Ma. This result indicates frequent impact events on the parent body like that recorded for other solar‐gas‐rich meteorites. Assuming single‐stage exposure after an ejection event from the parent body, the space exposure age is 11.0 ± 1.1 Ma, which is close to the peak of ~10 Ma in the exposure age distribution for the solar‐gas‐free R chondrites. 相似文献
106.
Sayaka Yasunaka Yukihiro Nojiri Taketo Hashioka Chisato Yoshikawa Taketoshi Kodama Shin-ichiro Nakaoka Sanae Chiba Fuminori Hashihama Masahide Wakita Ken Furuya Daisuke Sasano Akihiko Murata Hiroshi Uchida Michio Aoyama 《Journal of Oceanography》2018,74(1):1-11
We used more than 25,000 nutrient samples to elucidate for the first time basin-scale distributions and seasonal changes of surface ammonium (NH4 +) and nitrite (NO2 ?) concentrations in the Pacific Ocean. The highest NH4 +, NO2 ?, and nitrate (NO3 ?) concentrations were observed north of 40°N, in the coastal upwelling region off the coast of Mexico, and in the Tasman Sea. NH4 + concentrations were elevated during May–October in the western subarctic North Pacific, May–December in the eastern subarctic North Pacific, and June–September in the subtropical South Pacific. NO2 ? concentrations were highest in winter in both hemispheres. The seasonal cycle of NH4 + was synchronous with NO2 ?, NO3 ?, and satellite chlorophyll a concentrations in the western subtropical South Pacific, whereas it was synchronous with chlorophyll-a but out of phase with NO2 ? and NO3 ? in the subarctic regions. 相似文献
107.
108.
Akihiko Morimoto Shoichiro Kojima Sen Jan Daisuke Takahashi 《Estuarine, Coastal and Shelf Science》2009
We investigated the movement of the Kuroshio axis on the northeast shelf of Taiwan associated with the passage of typhoons, using sea surface current data observed by the ocean radar system on Yonaguni and Ishigaki islands. First, we examined daily Kuroshio axis variation on the northeast shelf of Taiwan during typhoon events. The ocean radar data showed that the Kuroshio axis moved onto the shelf after passages of typhoons. The Kuroshio moved onto the shelf and stayed there after the passage of Typhoon Hai-Tang; while the Kuroshio maintained this pattern, southerly wind blew continuously for 4 days. The mean current speed northeast of Taiwan after the typhoon's passage increased by 18 cm s−1. In addition, the sea level difference between two satellite altimetry tracks east of Taiwan increased by 14.4 cm. These results suggest that coastal upwelling east of Taiwan caused by the southerly wind generated an east–west sea level difference that, in turn, generated a northward geostrophic current. This current could have enhanced the Kuroshio east of Taiwan, and pushed it onto the shelf. 相似文献
109.
Sohiko Kameyama Urumu Tsunogai Fumiko Nakagawa Motoki Sasakawa Daisuke D. Komatsu Akira Ijiri Junko Yamaguchi Takeo Horiguchi Hiroshi Kawamura Aika Yamaguchi Atsushi Tsuda 《Marine Chemistry》2009,115(1-2):92-101
During the Subarctic Pacific Iron Experiment for Ecosystem Dynamics Study ΙΙ (SEEDS-II), we monitored variations in the concentrations of non-methane hydrocarbons (NMHCs), CH3Cl, N2O, and CH4 within a phytoplankton bloom. Stable isotopic compositions were also determined to evaluate the sources of the variations. Although there was little variation in either the concentrations or the stable isotopic compositions of alkenes, CH3Cl, N2O, and CH4 during the 23-day observation period, alkane concentrations increased substantially as the phytoplankton bloomed. The column-integrated quantities of alkanes increased to 3 times pre-bloom levels for C2H6, 5 times for C3H8, and 20 times for n-C4H10. The δ13C values of both C2H6 and C3H8 remained almost constant while concentrations increased, whereas that of n-C4H10 increased by about 12‰. To evaluate the sources of the alkanes produced during the bloom, we compared their δ13C values with those of alkanes produced in axenic phytoplankton cultures in our laboratory. We concluded that during the SEEDS-ΙΙ experiment the major portions of C2H6 and C3H8 were produced during the autolysis of diatoms cells, whereas n-C4H10 was produced during autolysis of other phytoplankton cells such as cryptophytes and dinoflagellates. 相似文献
110.
Tatsuro Watanabe Daisuke Simizu Kou Nishiuchi Toru Hasegawa Osamu Katoh 《Journal of Oceanography》2009,65(6):791-801
We examined the surface current structure in the Tsushima Warm Current (TWC) region of the Japan Sea based on a dataset from
satellite-tracked surface drifters, including our new deployments during 2004–2008. The gridded mean current velocity and
mean kinetic energy (KE) fields calculated from all available drifter data revealed the structure and seasonality of the three
branches of the TWC. By comparing the eddy kinetic energy (EKE) field to the KE field, we found four regions where the ratio
of EKE to KE was high. In particular, this ratio became extremely high east of the Oki Islands located between the first branch
of the TWC (FBTWC) and the second branch of the TWC (SBTWC). Our analysis suggests that the generation of alternate warm and
cold eddies east of the Oki Island induced this high ratio. The occurrence of a warm or cold eddy was related to the route—either
nearshore or offshore—of the SBTWC. When the offshore route of the SBTWC became dominant, a warm eddy was frequently generated
east of the Oki Islands. In contrast, when the nearshore route of the SBTWC became dominant, a cold eddy was more likely to
be generated. 相似文献