Generalized total least squares to characterize biogeochemical processes of the ocean

The chemical composition of the global ocean is governed by biological, chemical, and physical processes. These processes interact with each other so that the concentrations of carbon, oxygen, nitrogen (mainly from nitrate, nitrite, ammonium), and phosphorous (mainly from phosphate), vary in constant proportions, referred to as the Redfield ratios. We construct here the generalized total least squares estimator of these ratios. The significance of our approach is twofold; it respects the hydrological characteristics of the studied areas, and it can be applied identically in any area where enough data are available. The tests applied to Atlantic Ocean data highlight a variability of the Redfield ratios, both with geographical location and with depth. This variability emphasizes the importance of local and accurate estimates of Redfield ratios.     

Hydrogen peroxide production in marine bathing waters: Implications for fecal indicator bacteria mortality

Hydrogen peroxide concentrations [H(2)O(2)] have been measured over the last two decades in multiple studies in surface waters in coastal, estuarine and oceanic systems. Diurnal cycles consistent with a photochemical production process have frequently being observed, with [H(2)O(2)] increasing by two orders of magnitude over the course of the day, from low nM levels in the early morning to 10(2)nM in late afternoon. Production rates range from <10 for off-shore ocean waters to 20-60nMh(-1) for near-shore coastal and estuarine environments. Slow night-time loss rates (<10nMh(-1)) have been attributed to biological and particle mediated processes. Diurnal cycles have also frequently been observed in fecal indicator bacteria (FIB) levels in surf zone waters monitored for microbial water quality. Measured peak peroxide concentrations in surface coastal seawaters are too low to directly cause FIB mortality based on laboratory studies, but likely contribute to oxidative stress and diurnal cycling. Peroxide levels in the surf zone may be increased by additional peroxide production mechanisms such as deposition, sediments and stressed marine biota, further enhancing impacts on FIB in marine bathing waters.     

Ocean urea fertilization for carbon credits poses high ecological risks

The proposed plan for enrichment of the Sulu Sea, Philippines, a region of rich marine biodiversity, with thousands of tonnes of urea in order to stimulate algal blooms and sequester carbon is flawed for multiple reasons. Urea is preferentially used as a nitrogen source by some cyanobacteria and dinoflagellates, many of which are neutrally or positively buoyant. Biological pumps to the deep sea are classically leaky, and the inefficient burial of new biomass makes the estimation of a net loss of carbon from the atmosphere questionable at best. The potential for growth of toxic dinoflagellates is also high, as many grow well on urea and some even increase their toxicity when grown on urea. Many toxic dinoflagellates form cysts which can settle to the sediment and germinate in subsequent years, forming new blooms even without further fertilization. If large-scale blooms do occur, it is likely that they will contribute to hypoxia in the bottom waters upon decomposition. Lastly, urea production requires fossil fuel usage, further limiting the potential for net carbon sequestration. The environmental and economic impacts are potentially great and need to be rigorously assessed.     

The AMANDES tidal model for the Amazon estuary and shelf

The AMANDES project aims to study transports from the Andean mountains to the Atlantic Ocean through the Amazon system. This requires realistic estuarine modelling in this area strongly forced by tides and river discharge. As none of the existing models for this region would fit the actual needs of the project, a specific new generation model has been implemented.The model is based on the hydrodynamic finite element model T-UGOm. In a first step, we limit our investigations to tidal dynamics. As the Amazon estuary is a very shallow macro-tidal area, it is necessary to improve the available bathymetries and to develop a precise bottom friction parametrisation.In this paper, we discuss the implementation of a high resolution regional model. This allows us to develop a precise and accurate tidal model: for instance, the overall root mean square error on complex differences is reduced from 54 cm in a standard model to 27 cm in our best model. Such precise and accurate tidal modelling is a prerequisite for modelling particle transport.     

Long-term modification of Arctic lake ecosystems: Reference condition, degradation under toxic impacts and recovery (case study Imandra Lakes, Russia)

In this study, published data on Lake Imandra, north-west Russia, have been synthesised to investigate trends in lake contamination and recovery due to changing inputs of heavy metals and nutrients over time. Records of water chemistry, phytoplankton, zooplankton and fish communities have been used to determine the status of aquatic ecosystem health in three distinct phases of Lake Imandra's recent history. Firstly, background (reference) conditions within the lake have been established to determine lake conditions prior to anthropogenic influences. Secondly, a period of ecosystem degradation due to anthropogenic inputs of toxic metals and nutrients has been described. Finally, evidence of lake recovery due to recent decreases of toxic metals and nutrients has been explored. Pollution of Lake Imandra began in the 1930s, reaching a peak in the 1980s. Increases in heavy metal and nutrient inputs transformed the typical Arctic ecosystem. During the contamination phase, there was a decrease in Arctic species and in biodiversity. During the last 10 years, pollution has decreased and the lake has been recolonised by Arctic water species. Ecosystem recovery is indicated by a change of predominant species, an increase in the individual mass of organisms and an increase in the biodiversity index of plankton communities. In accordance with Odum's ecosystem succession theory, this paper demonstrates that the ecosystem has transformed to a more stable condition with new defining parameters. This illustrates that the recovery of Arctic ecosystems towards pre-industrial reference conditions after a reduction in anthropogenic stresses occur, although a complete return to background conditions may not be achievable. Having determined the status of current ecosystem health within Lake Imandra, the effect of global warming on the recovery process is discussed. Climate warming in Arctic regions is likely to move the ecosystem towards a predominance of eurybiontic species in the community structure. These organisms have the ability to tolerate a wider range of environmental conditions than typical Arctic inhabitants and will gain advantages in development. This indicates that the full recovery of Arctic ecosystems in a warming climate may not be possible.     

Rill development and soil erosion: a laboratory study of slope and rainfall intensity

A total of 15 rainfall simulation experiments were conducted in a 1 m by 2 m box varying slope (10, 20, 30%) and rainfall intensity (60, 90, 120 mm h^?1). The experiments were performed to study how rill networks initiate and evolve over time under controlled conditions with regard to the treatment variables considered, and to allow for input in a computer simulation model. Runoff and sediment yield samples were collected. Digital elevation models were calculated by means of photogrammetry for several time steps of most experiments. The soil used in the experiments was a basal till derived Cambisol typical for the Swiss Plateau. While significant differences were found for sediment yield, runoff did not vary significantly with treatment combinations. Increasing rainfall intensity had a larger effect on sediment yield than increasing slope. Rill density and energy expenditure decreased with time, suggesting that energy expenditure was a useful parameter to describe the emergence of rill network at the laboratory scale. Copyright © 2010 John Wiley & Sons, Ltd.     

Sedimentary evidence of prehistoric distant-source tsunamis in the Hawaiian Islands

Over the past 200 years of written records, the Hawaiian Islands have experienced tens of tsunamis generated by earthquakes in the subduction zones of the Pacific ‘Ring of Fire’ (for example, Alaska–Aleutian, Kuril–Kamchatka, Chile and Japan). Mapping and dating anomalous beds of sand and silt deposited by tsunamis in low-lying areas along Pacific coasts, even those distant from subduction zones, is critical for assessing tsunami hazard throughout the Pacific basin. This study searched for evidence of tsunami inundation using stratigraphic and sedimentological analyses of potential tsunami deposits beneath present and former Hawaiian wetlands, coastal lagoons, and river floodplains. Coastal wetland sites on the islands of Hawai΄i, Maui, O΄ahu and Kaua΄i were selected based on historical tsunami runup, numerical inundation modelling, proximity to sandy source sediments, degree of historical wetland disturbance, and breadth of prior geological and archaeological investigations. Sand beds containing marine calcareous sediment within peaty and/or muddy wetland deposits on the north and north-eastern shores of Kaua΄i, O΄ahu and Hawai΄i were interpreted as tsunami deposits. At some sites, deposits of the 1946 and 1957 Aleutian tsunamis are analogues for deeper, older probable tsunami deposits. Radiocarbon-based age models date sand beds from three sites to ca 700 to 500 cal yr bp , which overlaps ages for tsunami deposits in the eastern Aleutian Islands that record a local subduction zone earthquake. The overlapping modelled ages for tsunami deposits at the study sites support a plausible correlation with an eastern Aleutian earthquake source for a large prehistoric tsunami in the Hawaiian Islands.     

Diatom-based total phosphorus (TP) and pH transfer functions for the Irish Ecoregion

A 72-lake diatom training set was developed for the Irish Ecoregion to examine the response of surface sediment diatom assemblages to measured environmental variables. A variety of multivariate data analyses was used to investigate environmental and biological data structure and their inter-relationships. Of the variables used in determining a typology for lakes in the Irish Ecoregion, alkalinity was the only one found to have a significant effect on diatom assemblages. A total of 602 diatom taxa were identified, with 233 recorded at three or more sites with abundances ≥1%. Generally diatom data displayed a high degree of heterogeneity at the species level and non-linear ecological responses. Both pH and total phosphorus (TP) (in the ranges of 5.1–8.5 and 4.0–142.3 μg l⁻¹ respectively) were shown to be the most significant variables in determining the surface sediment diatom assemblages. The calibration models for pH and TP were developed using the weighted averaging (WA) method; data manipulation showed strong influences on model performances. The optima WA models based on 70 lakes produced a jack-knifed coefficient of determination (r ² _jack) of 0.89 with a root mean squared error (RMSEP) of 0.32 for pH and r ² _jack of 0.74 and RMSEP of 0.21 (log₁₀ μg l⁻¹) for TP. Both models showed strong performances in comparison with existing models for Ireland and elsewhere. Application of the pH and TP transfer functions developed here will enable the generation of quantitative water quality data from the expanding number of palaeolimnological records available for the Irish Ecoregion, and thus facilitate the use of palaeolimnological approaches in the reconstruction of past lake water quality, ecological assessment and restoration.     

Micromechanical inspection of incremental behaviour of crushable soils

In granular soils grain crushing reduces dilatancy and stress obliquity enhances crushability. These are well-supported specimen-scale experimental observations. In principle, those observations should reflect some peculiar micromechanism associated with crushing, but which is it? To answer that question the nature of crushing-induced particle-scale interactions is here investigated using an efficient DEM model of crushable soil. Microstructural measures such as the mechanical coordination number and fabric are examined while performing systematic stress probing on the triaxial plane. Numerical techniques such as parallel and the newly introduced sequential probing enable clear separation of the micromechanical mechanisms associated with crushing. Particle crushing is shown to reduce fabric anisotropy during incremental loading and to slow fabric change during continuous shearing. On the other hand, increased fabric anisotropy does take more particles closer to breakage. Shear-enhanced breakage appears then to be a natural consequence of shear-enhanced fabric anisotropy. The particle crushing model employed here makes crushing dependent only on particle and contact properties, without any pre-established influence of particle connectivity. That influence does not emerge, and it is shown how particle connectivity, per se, is not a good indicator of crushing likelihood.