Automated probabilistic classification of transients and variables

There is an increasing number of large, digital, synoptic sky surveys, in which repeated observations are obtained over large areas of the sky in multiple epochs. Likewise, there is a growth in the number of (often automated or robotic) follow‐up facilities with varied capabilities in terms of instruments, depth, cadence, wavelengths, etc., most of which are geared toward some specific astrophysical phenomenon. As the number of detected transient events grows, an automated, probabilistic classification of the detected variables and transients becomes increasingly important, so that an optimal use can be made of follow‐up facilities, without unnecessary duplication of effort. We describe a methodology now under development for a prototype event classification system; it involves Bayesian and Machine Learning classifiers, automated incorporation of feedback from follow‐up observations, and discriminated or directed follow‐up requests. This type of methodology may be essential for the massive synoptic sky surveys in the future. (© 2008 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Environmental dependence of stellar mass,SFR, and SSFR for the Luminous Red Galaxy (LRG) sample of the SDSS DR7

Using the Luminous Red Galaxy (LRG) sample of the Sloan Digital Sky Survey Data Release 7 (SDSS DR7), we investigate the environmental dependence of stellar mass, star formation rate (SFR) and specific star formation rate (SSFR) of LRGs. It is found that stellar mass of LRGs nearly is independent of local environments, and that the environmental dependence of SFR and SSFR in the LRG sample is much weaker than the one in the Main galaxy sample. One possible explanation is that galaxy color and morphology are a pair of galaxy properties most predictive of local environments, while LRGs are a group of galaxies that are likely to be luminous, red and of early types (© 2012 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Effect of reproductive state and sex on movement and food consumption of western rock lobster (Panulirus cygnus) in a tank environment

The catchability of western rock lobsters (Panulirus cygnus) during the spawning season (October and November) may be affected by their reproductive state. In this study, movement and food consumption of males and females of different reproductive states held in laboratory tanks were measured as proxies for catchability. Density of lobsters was found to influence both movement and food consumption. Solitary animals and, to a lesser extent, two lobsters per tank, were more sedentary and consumed significantly less food than animals at a density of three or four specimens per tank. Tests using three animals per tank confirmed that mature, unmated, and ovigerous females carrying early stage eggs moved more frequently away from their shelters than males or females carrying late stage eggs (P < 0.0001, d.f. = 3). Further, unmated females and females with early stage eggs recorded significantly higher food consumption (P < 0.0061, d.f. = 3) compared with males or females carrying late stage eggs. The greater time spent away from shelter and also food consumption make unmated females and females with early stage eggs likely to be more catchable than males or females with late stage eggs. As catchability is commonly used to obtain population estimates from survey data, these results have implications for surveys which use catch rates of breeding animals as indicators of egg production.     

Depth of settlement of two mussel species on suspended collectors in Marlborough Sounds,New Zealand (Note)

The preferred depth of settlement and settlement period of two species of mussel spat were monitored at Yncyca Bay (NZMS1 S15 220460) and Wet Inlet (NZMS1 S16 265432) in the Marlborough Sounds on collectors suspended in 0–4 m of water between 20 October 1975 and 4 April 1976. Peak settlement of Mytilus edulis aoteanus was between 20 October 1975 and 4 January 1976, and decreased with increasing depth. Peak settlement of Perna canaliculus was between 16 February 1976 and 12 April 1976, and showed no preferred depth of settlement.

Capture of wild stocks of Mytilus edulis aoteanus and Perna canaliculus spat for use in aquaculture has become more reliable through accurate forecasting of peak settlement periods, and knowledge of preferred depth of settlement of the two species.

Preferred depth of settlement of spat may affect the shore zonation of mussels.     

Cadmium,lead, copper,and zinc in Elminius modestus Darwin (Crustacea,Cirripedia) from Waitemata and Manukau Harbours,Auckland, New Zealand

Abstract

Concentrations of cadmium (Cd), lead (Pb), copper (Cu), and zinc (Zn) were measured in adult barnacles (Elminius modestus Darwin) from Waitemata and Manukau Harbours in the Auckland area, New Zealand. As in studies on sediments reported in the literature, it was possible to identify areas of likely anthropogenic influence, e.g., around the Auckland Harbour Bridge for Pb, Cu, and Zn. Groups of individuals with highest concentrations for these metals showed 19.8–23.8 mg Pb kg^?1, 198–266 mg Cu kg^?1, and 4460–6530 mg Zn kg^?1 (95% confidence limits, dry weight basis). Cd concentrations found for all barnacles from the Auckland area ranged from 0.8 to 3.1 mg kg^?1. Two samples from Omaha Beach, 60 km north of Auckland, were used as a reference. Accordingly, groups of individuals with lowest concentrations for Pb, Cu, and Zn could be allocated to this site using the Student‐Newman‐Keuls Multiple Range Test (0.5–1.3 mg Pb kg^?1, 8–10 mg Cu kg^?1, and 144–214 mg Zn kg^?1 ; 95% confidence limits). Only Cd concentrations were highest at Omaha Beach (8.6–12.1 mg Cd kg^?1 ). This result may have arisen from “naturally” increased bio‐availabilities of certain metals in mangrove systems which are reported in the literature. Generally, metal concentrations in barnacles from the Auckland Harbour area and from Omaha Beach were within the wider range for E. modestus as well as other barnacle species reported in the international literature.     

Behavior of soil plugs in open‐ended model piles driven into sands

Calibration chamber tests were conducted on open‐ended model piles driven into dried siliceous sands with different soil conditions in order to clarify the effect of soil conditions on load transfer mechanism in the soil plug. The model pile used in the test series was devised so that the bearing capacity of an open‐ended pile could be measured as three components: outside shaft resistance, plug resistance, and tip resistance. Under the assumption that the unit shaft resistance due to pile‐soil plug interaction varies linearly near the pile tip, the plug resistance was estimated. The plug capacity, which was defined as the plug resistance at ultimate condition, is mainly dependent on the ambient lateral pressure and relative density. The length of wedged plug that transfers the load decreases with the decrease of relative density, but it is independent of the ambient pressure and penetration depth. Under several assumptions, the value of earth pressure coefficient in the soil plug can be calculated. It gradually reduces with increase in the longitudinal distance from the pile tip. At the bottom of the soil plug, it tends to decrease with increase in the penetration depth and relative density, and to increase with the increase of ambient pressure. This may be attributed to (1) the decrease of friction angle as a result of increase in the effective vertical stress, (2) the difference in the dilation degree of the soil plug during driving with ambient pressures, and (3) the difference in compaction degree of soil plug during driving with relative densities. Based on the test results, an empirical equation was suggested to compute the earth pressure coefficient to be used in the calculation of plug capacity using one‐dimensional analysis, and it produces proper plug capacities for all soil conditions.     

Generation of continuous surface soil moisture dataset using combined optical and thermal infrared images

Surface soil moisture (SSM) is a critical variable for understanding water and energy flux between the atmosphere and the Earth's surface. An easy to apply algorithm for deriving SSM time series that primarily uses temporal parameters derived from simulated and in situ datasets has recently been reported. This algorithm must be assessed for different biophysical and atmospheric conditions by using actual geostationary satellite images. In this study, two currently available coarse‐scale SSM datasets (microwave and reanalysis product) and aggregated in situ SSM measurements were implemented to calibrate the time‐invariable coefficients of the SSM retrieval algorithm for conditions in which conventional observations are rare. These coefficients were subsequently used to obtain SSM time series directly from Meteosat Second Generation (MSG) images over the study area of a well‐organized soil moisture network named REMEDHUS in Spain. The results show a high degree of consistency between the estimated and actual SSM time series values when using the three SSM dataset‐calibrated time‐invariable coefficients to retrieve SSM, with coefficients of determination (R²) varying from 0.304 to 0.534 and root mean square errors ranging from 0.020 m³/m³ to 0.029 m³/m³. Further evaluation with different land use types results in acceptable debiased root mean square errors between 0.021 m³/m³ and 0.048 m³/m³ when comparing the estimated MSG pixel‐scale SSM with in situ measurements. These results indicate that the investigated method is practical for deriving time‐invariable coefficients when using publicly accessed coarse‐scale SSM datasets, which is beneficial for generating continuous SSM dataset at the MSG pixel scale.     

Understory and small trees contribute importantly to stemflow of a lower montane cloud forest

Stemflow (Sf) measurements in tropical rain and montane forests dominated by large trees rarely include the understory and small trees. In this study, contributions of lower (1‐ to 2‐m height) and upper (>2‐m height and <5‐cm diameter at breast height [DBH]) woody understory, small trees (5 < DBH < 10 cm), and canopy trees (>10‐cm DBH) to Sf per unit ground area (Sf_a) of a Mexican lower montane cloud forest were quantified for 32 days with rainfall (P) during the 2014 wet season. Rainfall, stemflow yield (Sf_y), vegetation height, density, and basal area were measured. Subsequently, stemflow funneling ratios (SFRs) were calculated, and three common methods to scale up Sf_y from individual trees to the stand level (tree‐Sf_y correlation, P‐Sf_y correlation, and mean‐Sf_y extrapolation) were used to calculate Sf_a. Understory woody plants, small trees, and upper canopy trees represented 96%, 2%, and 2%, respectively, of the total density. Upper canopy trees had the lowest SFRs (1.6 ± 0.5 Standard Error (SE) on average), although the lower understory had the highest (36.1 ± 6.4). Small trees and upper understory presented similar SFRs (22.9 ± 5.4 and 20.2 ± 3.9, respectively). Different Sf scaling methods generally yielded similar results. Overall Sf_a during the study period was 22.7 mm (4.5% of rainfall), to which the understory contributed 70.1% (15.9 mm), small trees 10.6% (2.4 mm), and upper canopy trees 19.3% (4.4 mm). Our results strongly suggest that for humid tropical forests with dense understory of woody plants and small trees, Sf of these groups should be measured to avoid an underestimation of overall Sf at the stand level.     

δ18O and δ13C in fossil shells of Radix sp. from the sediment succession of a dammed palaeo‐lake in the Yarlung Tsangpo valley,Tibet, China

A series of confirmed and suspected dammed palaeo‐lake sedimentary successions is scattered within the middle Yarlung Tsangpo valley in Tibet. However, the chronology, the genesis of the dam and its location, the water level of the dammed lake, the process of dam failure and the spatiotemporal relationships between the sedimentary successions remain controversial. Here, we focus on one sedimentary succession of the suspected dammed palaeo‐lake at Xigazê. We measured the grain‐size distribution, magnetic susceptibility, organic and inorganic carbon content, and δ¹³C_org and δ¹⁵N_total ratios of the sediments. In addition, we measured the δ¹⁸O_shell and δ¹³C_shell values of modern and fossil Radix sp. shells, and the δ¹⁸O_water and δ¹³C_DIC values of the ambient water with different hydrological regimes. The results indicate that the δ¹⁸O_shell values of modern Radix sp. and the δ¹⁸O_water of the ambient water body significantly depend on its hydrological status. In addition, a strong positive relationship was observed between δ¹⁸O_shell values of modern Radix sp. shells and the δ¹⁸O_water of the ambient water on the Tibetan Plateau. According to this correlation, the δ¹⁸O_water values of the palaeo‐water body are reconstructed using the δ¹⁸O_shell values of Radix sp. fossil shells in the Xigazê section. Further, based on the δ¹⁸O_shell values of fossil Radix sp., the reconstructed δ¹⁸O_water of the palaeo‐water body and the specific habitats of Radix sp., we infer that the sedimentary succession in the Xigazê broad valley was mainly formed within the backwater terminal zone of a dammed palaeo‐lake and that the elevation of the water level of the lake was approximately 3811 m a.s.l. AMS ¹⁴C dating indicates that the deposits of the dammed palaeo‐lake were formed at about 33–22 cal. ka BP. Finally, the presence of Radix sp. fossil shells within the Xigazê section suggests that Radix sp. survived the late Last Glacial Period on the Tibetan Plateau.