Speed bumps and barricades in the carbon cycle: substrate structural effects on carbon cycling

The observation that a fraction of organic matter produced in marine systems evades the concerted efforts of microbial communities and is buried in sediments suggests that there are ‘speed bumps’ in carbon degradation pathways that impede microbially driven remineralization processes. The initial step in degradation of macromolecules, extracellular enzymatic hydrolysis, is often stated to be ‘the’ rate-limiting step in carbon remineralization. Experimental investigations described here, however, demonstrate that at least in certain cases, microbes produce extracellular enzymes on time scales of hours to tens of hours in response to substrate addition, and hydrolysis is extremely rapid. If enzymatic hydrolysis can be rapid, what factors slow or stop organic matter degradation? A lack of the correct inducer to initiate enzyme production, and/or a lack of the correct organism to produce the required enzyme, may result in a complete lack of hydrolysis in certain environments—a barricade, rather than a speed bump. Preliminary evidence supporting this hypothesis includes a comparison of polysaccharide hydrolysis in seawater and sediments, which demonstrates that the spectrum of enzymes active in seawater and sediments are fundamentally different. Furthermore, a survey of enzyme activities in surface waters from a range of locations suggests that pelagic microbial communities also differ widely in their abilities to express specific extracellular enzymes. Trans-membrane transport through porins is yet another potential location of structure-related selectivity.Our efforts to identify speed bumps and barricades are hampered by our inability to structurally characterize in sufficient detail the macromolecular structures present in marine systems. Furthermore, assessments of organic matter ‘quality’ from a chemical perspective do not necessarily accurately reflect the availability of organic carbon to microbial communities. For these communities, in fact, ‘quality’ may be a variable, which depends on the enzymatic and uptake capabilities of community members. To begin to assess substrate structure and quality from a microbial perspective, we will have to combine specific knowledge of macromolecular structures with detailed investigations of the enzymatic and transport capabilities of heterotrophic marine microbes.     

The Potential for Environmentally Sound Development of Marine Deposits of Potassic and Phosphatic Minerals Offshore, Southern Africa

Extensive potassium and phosphorous-rich mineralization occurs on the outer continental shelf of the southern and west coasts of South Africa and Nambia. This article reviews the potential of exploiting these deposits in an environmentally sound manner for the manufacture of fertilizer. At present, reserves of potash and phosphate fertilizer are exploited from terresterial deposits, the majority being surface mined. The use of fertilizer in South Africa has shown no growth in the past 13 years, and, in some years, usage has even declined. On average, over the last decade, South Africa has consumed 2 million Mt of fertilizer (including nitrogen) per annum, the vast majority of phosphate fertilizer being produced by FOSKOR from the Phalaborwa Igneous Complex. Potash fertilizer is imported into South Africa. Although fertilizer consumption is expected to decrease in the short-term, there are good future prospects for the domestic and international fertilizer market. Considerable research into both glauconitic (containing K 2 O) and phosphatic deposits along the southern African continental shelf indicate that these sedimentary deposits have a complex genesis and mineralization. Of the total K 2 O reserves of 1300 million Mt on the southern African margin, 1000 million Mt is located off the southern African west coast, and the remainder situated on the Agulhas Bank. The largest glauconite concentration ( ±300 million Mt K 2 O) off southern Africa lies west of Saldanha Bay, South Africa. The distribution of P 2 O 5 off southern Africa is dominated by the vast deposit between Walvis Bay and Luderitz, Nambia. This reserve is estimated to contain 1000 million Mt of greater than 5% P 2 O 5 in a relatively small area of about 10000 km2. The phosphorite deposit south of Saldanha Bay constitutes a reserve of ±3500 million Mt of apatite and the deposit on the Agulhas Bank comprises 5500 million Mt. The phosphate deposit off Saldanha Bay occurs as an extensive, low to medium grade deposit. Although vast resources of potash and phosphatic minerals occur along the southern African outer continental shelf the expensive nature of marine exploitation may render most of these deposits, especially the phosphates, subeconomic. The low price of fertilizer andextensive natureontheonland deposits, although confined to asmallnumber of countries, mean that it will not be financially viable to extract these deposits. Assuming high grade glauconitic sand with the right composition can be located, the high market price indicates good future prospects for these potash deposits.     

藻类分子生物技术两年评─—与藻类活性物质研究有关的生物技术

根据１９９２年６月－１９９４年６月国内外发表资料，评述海洋藻类活性物质研究的生物技术及最新成果。认为，海洋生物活性物质研究的重心正转向与海洋生物技术有关的研究。运用生物技术筛选、提取并生产藻类活性物质已经成为这一领域的主流。综合文献表明，藻类活性物质的生物技术正走向成熟，大量的活性物质被发现，光生物反应器将成为主要的下游生产技术，通过藻类基因工程生产药物已初现端倪。     

Otolith shape as a stock discrimination tool for ling (Genypterus blacodes) in the fjords of Chilean Patagonia

ABSTRACT

Genypterus blacodes, in terms of its fishing history and local economic importance, is an emblematic species harvested in Chilean Patagonia (41°00’–57°00’S). Most of the current fisheries and biological knowledge of this species come from the open ocean, whereas information about the species in fjords and inner channels is fragmentary. In 2018, two research surveys targeting G. blacodes were conducted in the fjords and inner channels of Chilean Patagonia. A total of 253 pairs of sagittal otoliths were sampled at three different localities, and their contours were modelled using wavelet analysis as a tool for stock discrimination. Contours were compared using canonical analysis, and classification was performed using linear discriminant and Random Forest analyses. The results indicated that the wavelet method is efficient in modelling otolith contours, and the discriminant analyses showed differences among fishing grounds across the latitudinal gradient, thus confirming the hypothesis that G. blacodes conform to at least two separate stock units in Chilean Patagonia. Fishing grounds that were closer in space showed higher levels of misclassification. The discussion focuses on how environmental variables and the geography of fjords shape stock differences and how this information can be used for the sustainable management of G. blacodes.     

Standard facies models to incorporate all heterogeneity levels in a reservoir model

The construction of reservoir models is frustrated by the fact that core and well cover only a fraction of the reservoir volume and it is therefore difficult to determine features like facies shape, -size, and -distribution, inter- and intra-facies boundaries and lateral trends from them. These features are, however, critical to fluid flow and they should necessarily be incorporated in the reservoir model and we therefore propose to systematically describe geometry and distribution of facies. To this end we make use of “standard facies models” that a priori contain all elements and boundaries of facies for a number of typical depositional environments.     

Application of hermite polynomial to wave and wave force statistics

This paper discusses the use of Hermite polynomial in the derivation of statistical properties of waves, wave field kinematics and dynamics and wave forces under various conditions. Specifically, covariance functions and approximate spectra are obtained for (1) wave force on vertical cylinder according to Morison's formula, (2) horizontal fluid particle velocity considering the effects of free surface fluctuations, and (3) elevation of breaking waves.     

In-line response of a cylinder in oscillatory flow

The most widely used mathematical model to represent flow-induced in-line forces on structures is based on the Morison¹ equation. The present paper investigates the validity of using an extension of Morison's equation for non-stationary structures, by comparing predictions with results from a simple laboratory experiment. An elastically-mounted circular cylinder is placed in the sinusoidal flow of a U-tube, and responds in-line with the flow. Cylinder forces and responses are recorded over a range of Keulegan Carpenter numbers up to 35. An equation of motion is solved simply by using relative coordinates and by employing equivalent linearisation. The linear results are compared over a wide variation of parameters with solutions using the full nonlinear equation. Thereafter experimental results are compared with linear predictions.     

ENSO variability and the eastern tropical Pacific: A review

El Niño-Southern Oscillation (ENSO) encompasses variability in both the eastern and western tropical Pacific. During the warm phase of ENSO, the eastern tropical Pacific is characterized by equatorial positive sea surface temperature (SST) and negative sea level pressure (SLP) anomalies, while the western tropical Pacific is marked by off-equatorial negative SST and positive SLP anomalies. Corresponding to this distribution are equatorial westerly wind anomalies in the central Pacific and equatorial easterly wind anomalies in the far western Pacific. Occurrence of ENSO has been explained as either a self-sustained, naturally oscillatory mode of the coupled ocean–atmosphere system or a stable mode triggered by stochastic forcing. Whatever the case, ENSO involves the positive ocean–atmosphere feedback hypothesized by Bjerknes. After an El Niño reaches its mature phase, negative feedbacks are required to terminate growth of the mature El Niño anomalies in the central and eastern Pacific. Four requisite negative feedbacks have been proposed: reflected Kelvin waves at the ocean western boundary, a discharge process due to Sverdrup transport, western Pacific wind-forced Kelvin waves, and anomalous zonal advections. These negative feedbacks may work together for terminating El Niño, with their relative importance being time-dependent.ENSO variability is most pronounced along the equator and the coast of Ecuador and Peru. However, the eastern tropical Pacific also includes a warm pool north of the equator where important variability occurs. Seasonally, ocean advection seems to play an important role for SST variations of the eastern Pacific warm pool. Interannual variability in the eastern Pacific warm pool may be largely due to a direct oceanic connection with the ENSO variability at the equator. Variations in temperature, stratification, insolation, and productivity associated with ENSO have implications for phytoplankton productivity and for fish, birds, and other organisms in the region. Long-term changes in ENSO variability may be occurring and are briefly discussed. This paper is part of a comprehensive review of the oceanography of the eastern tropical Pacific.