Efficacy of PIT tags and an autonomous antenna system to study the juvenile life stage of an estuarine-dependent fish

Many marine fishes use spatially distinct habitats as juveniles and adults. Determining which juvenile habitats are most important to sustaining adult populations (i.e., which habitats are nurseries) has proven difficult, in part due to challenges in estimating survival of juveniles in putative nursery habitats. Recent technological advances have made largescale tagging efforts a viable approach to estimating survival of juvenile fishes by increasing recapture rates and enabling the use of individual-identification tags. These techniques, using Passive Integrated transponder (PIT) tags and autonomous antenna detection systems (antenna), have been successfully applied in freshwater environments. This paper reports the adaptation of these techniques to estuarine mangrove creeks (salinity: 2–28‰) for research of the juvenile life stage on an estuarine-dependent marine fish,Centropomus undecimalis. Retention rate of PIT tags in juveniles >120 mm standard length was 100%, with no mortality. The antenna detection field covered 48% of the creek water column, and the antenna was experimentally determined to detect approximately 67% of tagged fish that swam through. Overall recapture rate of tagged fish by the antenna was >40%. This recapture rate is higher than the sparse data typical of traditional tag-recapture studies. A time-dependent Jolly-Seber model was fit to the data, providing estimates of capture probability (0.8) and weekly apparent survival (0.41) that will be invaluable in comparing juvenile habitats of different quality (e.g., natural versus anthropogenically degraded). This research demonstrates the viability of this approach to fish research in estuarine habitats.     

Bank erosion and channel width change in a tropical catchment

Catchment sediment budget models are used to predict the location and rates of bank erosion in tropical catchments draining to the Great Barrier Reef lagoon, yet the reliability of these predictions has not been tested due to a lack of measured bank erosion data. This paper presents the results of a 3 year field study examining bank erosion and channel change on the Daintree River, Australia. Three different methods were employed: (1) erosion pins were used to assess the influence of riparian vegetation on bank erosion, (2) bench‐marked cross‐sections were used to evaluate annual changes in channel width and (3) historical aerial photos were used to place the short term data into a longer temporal perspective of channel change (1972–2000). The erosion pin data suggest that the mean erosion rate of banks with riparian vegetation is 6·5 times (or 85%) lower than that of banks without riparian vegetation. The changes measured from cross‐section surveys suggest that channel width has increased by an average of 0·74 (±0·47) m a^?1 over the study period (or ～0·8% yr^?1). The aerial photo results suggest that over the last 30 years the Daintree River has undergone channel contraction of the order of 0·25 m a^?1. The cross‐section data were compared against modelled SedNet bank erosion rates, and it was found that the model underestimated bank erosion and was unable to represent the variable erosion and accretion processes that were observed in the field data. The reach averaged bank erosion rates were improved by the inclusion of locally derived bed slope and discharge estimates; however, the results suggest that it will be difficult for catchment scale sediment budget models to ever accurately predict the location and rate of bank erosion due to the variation in bank erosion rates in both space and time. Copyright © 2008 John Wiley & Sons, Ltd.     

Stable isotopes of water reveal differences in plant – soil water relationships across northern environments

We compared stable isotopes of water in plant stem (xylem) water and soil collected over a complete growing season from five well-known long-term study sites in northern/cold regions. These spanned a decreasing temperature gradient from Bruntland Burn (Scotland), Dorset (Canadian Shield), Dry Creek (USA), Krycklan (Sweden), to Wolf Creek (northern Canada). Xylem water was isotopically depleted compared to soil waters, most notably for deuterium. The degree to which potential soil water sources could explain the isotopic composition of xylem water was assessed quantitatively using overlapping polygons to enclose respective data sets when plotted in dual isotope space. At most sites isotopes in xylem water from angiosperms showed a strong overlap with soil water; this was not the case for gymnosperms. In most cases, xylem water composition on a given sampling day could be better explained if soil water composition was considered over longer antecedent periods spanning many months. Xylem water at most sites was usually most dissimilar to soil water in drier summer months, although sites differed in the sequence of change. Open questions remain on why a significant proportion of isotopically depleted water in plant xylem cannot be explained by soil water sources, particularly for gymnosperms. It is recommended that future research focuses on the potential for fractionation to affect water uptake at the soil-root interface, both through effects of exchange between the vapour and liquid phases of soil water and the effects of mycorrhizal interactions. Additionally, in cold regions, evaporation and diffusion of xylem water in winter may be an important process.     

Using isotopes to understand landscape-scale connectivity in a groundwater-dominated,lowland catchment under drought conditions

The Demnitzer Millcreek catchment (DMC), is a 66 km² long-term experimental catchment located 50 km SE of Berlin. Monitoring over the past 30 years has focused on hydrological and biogeochemical changes associated with de-intensification of farming and riparian restoration in the low-lying landscape dominated by rain-fed farming and forestry. However, the hydrological function of the catchment, which is closely linked to nutrient fluxes and highly sensitive to climatic variability, is still poorly understood. In the last 3 years, a prolonged drought period with below-average rainfall and above-average temperatures has resulted in marked hydrological change. This caused low soil moisture storage in the growing season, agricultural yield losses, reduced groundwater recharge, and intermittent streamflows in parts of an increasingly disconnected channel network. This paper focuses on a two-year long isotope study that sought to understand how different parts of the catchment affect ecohydrological partitioning, hydrological connectivity and streamflow generation during drought conditions. The work has shown the critical importance of groundwater storage in sustaining flows, basic in-stream ecosystem services and the dominant influence of vegetation on groundwater recharge. Recharge was much lower and occurred during a shorter window of time in winter under forests compared to grasslands. Conversely, groundwater recharge was locally enhanced by the restoration of riparian wetlands and storage-dependent water losses from the stream to the subsurface. The isotopic variability displayed complex emerging spatio-temporal patterns of stream connectivity and flow duration during droughts that may have implications for in-stream solute transport and future ecohydrological interactions between landscapes and riverscapes. Given climate projections for drier and warmer summers, reduced and increasingly intermittent streamflows are very likely not just in the study region, but in similar lowland areas across Europe. An integrated land and water management strategy will be essential to sustaining catchment ecosystem services in such catchment systems in future.     

Hydrodynamics and sediment-transport in the nearshore of Poverty Bay, New Zealand: Observations of nearshore sediment segregation and oceanic storms

Nearshore regions act as an interface between the terrestrial environment and deeper waters. As such, they play important roles in the dispersal of fluvial sediment and the transport of sand to and from the shoreline. This study focused on the nearshore of Poverty Bay, New Zealand, and the processes controlling the dispersal of sediment from the main source, the Waipaoa River. Hydrodynamics and sediment-transport in water shallower than 15 m were observed from April through mid-September 2006. This deployment afforded observations during 3-4 periods of elevated river discharge and 5 dry storms.Similar wind, river discharge, wave, current, and turbidity patterns were characterized during three of the wet storms. At the beginning of each event, winds blew shoreward, increasing wave heights to 2-3 m within Poverty Bay. As the cyclonic storms moved through the system the winds reversed direction and became seaward, reducing the local wave height and orbital velocity while river discharge remained elevated. At these times, high river discharge and relatively small waves enabled fluvially derived suspended sediment to deposit in shallow water. Altimetry measurements indicated that at least 7 cm was deposited at a 15 m deep site during a single discharge event. Turbidity and seabed observations showed this deposition to be removed, however, as large swell waves from the Southern Ocean triggered resuspension of the material within three weeks of deposition. Consequently, two periods of dispersal were associated with each discharge pulse, one coinciding with fluvial delivery, and a second driven by wave resuspension a few weeks later. These observations of nearfield sediment deposition contradict current hypotheses of very limited sediment deposition in shallow water offshore of small mountainous rivers when floods and high-energy, large wave and fast current, oceanic conditions coincide.Consistently shoreward near-bed currents, observed along the 10 m isobath of Poverty Bay, were attributed to a combination of estuarine circulation, Stokes drift, and wind driven upwelling. Velocities measured at the 15 m isobath, however, were directed more alongshore and diverged from those at the 10 m isobath. The divergence in the currents observed at the 10 and 15 m locations seemed to facilitate segregation of coarse and fine sediment, with sand transported near-bed toward the beach, while suspended silts and clays were exported to deeper water.     

Infrastructure hazard resilience trends: an analysis of 25 years of research

Hazard research has made significant strides over the last several decades, answering critical questions surrounding vulnerability and recovery. Recently, resilience has come to the forefront of scholarly debates and practitioner strategies, yet there remain challenges implementing resilience in practice, the result of a complex web of research that spread across numerous fields of study. As a result, there is a need to analyze and reflect on the current state of resilience literature. We reviewed 241 journal articles from the Web of Science and Engineering Village databases from 1990 to 2015 to analyze research trends in geographic location of studies, methods employed, units of analysis, and resilience dimensions studied, as well as correlations between each of these categories. The majority of the studies analyzed were conducted in North America, used quantitative methods, focused on infrastructure and community units of analysis, and studied governance, infrastructure, and economic dimensions of resilience. This analysis points to the need to: (1) conduct studies in developing country contexts, where resilience is particularly important; (2) employ mixed-methods for additional depth to quantitative studies; (3) connect units of analysis, such as infrastructure and community; and (4) expand on the measurement and study of environmental and social dimensions of resilience.     

Changes in fine sediment size distributions due to interactions with streambed sediments

In the classical view of fine sediment transport and deposition in streams, particles are expected to be removed from flowing water simply by direct sedimentation onto the streambed. However, recent research has demonstrated that fine sediments can propagate into pore spaces in the streambed due to hyporheic exchange and be removed by a combination of physical and chemical processes. This behaviour can significantly alter fine sediment size distributions during in-stream sediment transport because the physical transport of fine particles and their attachment to bed sediment grains are both a function of the particle size. Herein, we present model simulations for deposition of suspended sediments with a bimodal size distribution. We also applied this approach to analyse the results of laboratory flume observations of suspended sediment deposition. Results from model simulations and flume experiments clearly show that the rate of particle deposition increases with increasing particle size. Thus, the larger particles are preferentially removed from mixtures and there is a fining of the mixed suspensions over time. Both particle deposition mechanisms, i.e. particle sedimentation and filtration, contribute to the fining of the mixed fine particle suspensions over time, and their effects are clearly demonstrated using the fundamental process-based model. These results clearly demonstrate the effects of stream-subsurface exchange on the temporal evolution of the suspended fine sediment size distribution in downstream transport.     

Iron solid-phase differentiation along a redox gradient in basaltic soils

Iron compounds in soil are multifunctional, providing physical structure, ion sorption sites, catalytic reaction-centers, and a sink for respiratory electrons. Basaltic soils contain large quantities of iron that reside in different mineral and organic phases depending on their age and redox status. We investigated changes in soil iron concentration and its solid-phase speciation across a single-aged (400 ky) lava flow subjected to a gradient in precipitation (2200-4200 mm yr⁻¹) and hence redox history. With increasing rainfall and decreasing Eh, total Fe decreased from about 25% to <1% of the soil mass. Quantitative speciation of soil solid-phase iron was constrained by combining ⁵⁷Fe Mössbauer spectroscopy (MBS) at 295 and 4.2 K with powder X-ray diffraction, selective chemical extractions, and magnetic susceptibility measurements. This approach allowed us to partition iron into (1) nanoparticulate and microcrystalline Fe^III-(oxy)hydroxides, (2) microcrystalline and bulk Fe^III-oxides, (3) organic/silicate bound Fe^III, and (4) ferrous iron. The Fe^III-(oxy)hydroxide fraction dominated solid-phase Fe, exhibiting a crystallinity continuum based on magnetic ordering temperature. The continuum extended from well-ordered microcrystalline goethite through nanocrystalline Fe^III-(oxy)hydroxides to a nano Fe^III-(oxy)hydroxide phase of extremely low crystallinity. Magnetic susceptibility was correlated (R² = 0.77) with Fe^III-oxide concentration, consistent with a contribution of maghemite to the otherwise hematite dominated Fe-oxide fraction. The Fe^III-(oxy)hydroxide fraction of total Fe decreased with increasing rainfall and was replaced by corresponding increase in the organic/silicate Fe^III fraction. The crystallinity of the Fe^III-(oxy)hydroxides also decreased with increasing rainfall and leaching, with the most disordered members of the crystallinity continuum, the nano Fe^III-(oxy)hydroxides, gaining proportional abundance in the wetter sites. This finding runs counter to the conventional kinetic expectation of preferential removal of the most disordered minerals in a reductive dissolution-dominated environment. We suggest the persistence of highly disordered Fe phases reflects the dynamic redox conditions of these upland soils in which periods of anoxia are marked by high water-throughput and Fe²⁺(aq) removal, while periodic Fe oxidation events occur in the presence of high concentrations of organic matter. Our ⁵⁷Fe Mössbauer study shows basalt-derived nano-scale Fe^III phases are more disordered than current synthetic analogs and have nano-structural characteristics that are linked to their formation environment.     

Runoff‐induced sediment yield over dune slopes in the Negev Desert. 1: Quantity and variability

Although extensive data exist on runoff erosion and rates for non‐sandy hillslopes, data for arid dune slopes are scarce, owing to the widespread perception that the high infiltrability of sand will reduce runoff. However, runoff is generated on sandy dunes in the Hallamish dune field, western Negev Desert, Israel (P ≈ 95 mm) due to the presence of a thin (usually 1–3 mm) microbiotic crust. The runoff in turn produces erosion. Sediment yield was measured on ten plots (140–1640 m²) on the north‐ and south‐facing slopes of longitudinal dunes. Two plots facing north and two facing south were subdivided into three subplots. The subplots represented the crest of the active dune devoid of crust, the extensively crusted footslope of the dune, and the midslope section characterized by a patchy crust. The remaining plots extended the full length of the dune slope. No runoff and consequently no water‐eroded sediments were obtained from the crest subplots devoid of crust. However, runoff and sediment were obtained from the mid‐ and footslope crusted subplots. Sediment yield from the footslope subplots was much higher than from the midslopes, despite the higher sediment concentration that characterized the midslope subplots. The mean annual sediment yield at the Hallamish dune field was 432 g per metre width and was associated with high average annual concentrations of 32 g l^?1. The data indicate that owing to the presence of a thin microbiotic crust, runoff and water erosion may occur even within arid sandy dune fields. Copyright © 2001 John Wiley & Sons, Ltd.