Equatorial Atlantic variability and its relation to mean state biases in CMIP5

Coupled general circulation model (GCM) simulations participating in the Coupled Model Intercomparison Project Phase 5 (CMIP5) are analyzed with respect to their performance in the equatorial Atlantic. In terms of the mean state, 29 out of 33 models examined continue to suffer from serious biases including an annual mean zonal equatorial SST gradient whose sign is opposite to observations. Westerly surface wind biases in boreal spring play an important role in the reversed SST gradient by deepening the thermocline in the eastern equatorial Atlantic and thus reducing upwelling efficiency and SST cooling in the following months. Both magnitude and seasonal evolution of the biases are very similar to what was found previously for CMIP3 models, indicating that improvements have only been modest. The weaker than observed equatorial easterlies are also simulated by atmospheric GCMs forced with observed SST. They are related to both continental convection and the latitudinal position of the intertropical convergence zone (ITCZ). Particularly the latter has a strong influence on equatorial zonal winds in both the seasonal cycle and interannual variability. The dependence of equatorial easterlies on ITCZ latitude shows a marked asymmetry. From the equator to 15°N, the equatorial easterlies intensify approximately linearly with ITCZ latitude. When the ITCZ is south of the equator, on the other hand, the equatorial easterlies are uniformly weak. Despite serious mean state biases, several models are able to capture some aspects of the equatorial mode of interannual SST variability, including amplitude, pattern, phase locking to boreal summer, and duration of events. The latitudinal position of the boreal spring ITCZ, through its influence on equatorial surface winds, appears to play an important role in initiating warm events.     

What controls equatorial Atlantic winds in boreal spring?

The factors controlling equatorial Atlantic winds in boreal spring are examined using both observations and general circulation model (GCM) simulations from the coupled model intercomparison phase 5. The results show that the prevailing surface easterlies flow against the attendant pressure gradient and must therefore be maintained by other terms in the momentum budget. An important contribution comes from meridional advection of zonal momentum but the dominant contribution is the vertical transport of zonal momentum from the free troposphere to the surface. This implies that surface winds are strongly influenced by conditions in the free troposphere, chiefly pressure gradients and, to a lesser extent, meridional advection. Both factors are linked to the patterns of deep convection. Applying these findings to GCM errors indicates, that, consistent with the results of previous studies, the persistent westerly surface wind bias found in most GCMs is due mostly to precipitation errors, in particular excessive precipitation south of the equator over the ocean and deficient precipitation over equatorial South America. Free tropospheric influences also dominate the interannual variability of surface winds in boreal spring. GCM experiments with prescribed climatological sea-surface temperatures (SSTs) indicate that the free tropospheric influences are mostly associated with internal atmospheric variability. Since the surface wind anomalies in boreal spring are crucial to the development of warm SST events (Atlantic Niños), the results imply that interannual variability in the region may rely far less on coupled air–sea feedbacks than is the case in the tropical Pacific.     

Mid- and far-infrared extinction coefficients of hydrous silicate minerals

Extinction coefficients were measured for three kind of hydrous silicate minerals, montmorillonite, chlorite and serpentine, from 7 to 140 m. The infrared extinction coefficients of these minerals show (1) a few broad bands in the mid-infrared region and (2) a less steep wavelength-dependence in the far-infrared region, in contrast to those of high-temperature magnesium silicates. In the far-infrared region, montmorillonite shows a ^–0.8±0.1 dependence (, the wavelength) without any band structure, chlorite has a double maxima structure around 80 m, and serpentine shows a rather steep dependence with a small peak at 77 m.The changes of mid-infrared spectra by heating were measured. Change in chlorite spectrum is the most significant. Many fine features appear by heating and then they disappear. Above 900°C one broad feature remains around 10 m. Fine features of the montmorillonite spectrum disappear by heating. For serpentine, many new peaks appear and the spectrum resembles the spectrum of olivin. In near-infrared a band around 2.72 m disappears by heating.Extinction coefficients at very low temperatures were measured in the far-infrared region. For montmorillonite and serpentine, the spectrum is the same as that at room temperature. The double peaks of chlorite around 80 m become higher.     

Phase equilibria and the pressure-temperature path of the highest-grade Ryoke metamorphic rocks in the Yanai district, SW Japan

The garnet-cordierite zone, the highest-grade zone of the Ryoke metamorphic rocks in the Yanai district, SW Japan, is defined by the coexistence of garnet and cordierite in pelitic rocks. Three assemblages in this zone are studied in detail, i.e. spinel + cordierite + biotite, garnet + cordierite + biotite and garnet + biotite, all of which contain quartz, K-feldspar and plagioclase. The Mg/(Fe + Mg) in the coexisting minerals decreases in the following order: cordierite, biotite, garnet and spinel. Two facts described below are inconsistent with the paragenetic relation in the K₂OFeOMgOAl₂O₃SiO₂H₂O (KFMASH) system in terms of an isophysical variation. First, garnet and biotite in the last assemblage have Mg/(Fe + Mg) higher than those in the second. Second, the first two assemblages are described by the reaction,

Vertical distribution of bacterial abundance in the northwest pacific ocean

Mixed populations of free-living marine bacteria were collected at depths from the surface to the bottom (1,960m in Suruga Bay and 1,585 m in the Japan Sea) in the northwest Pacific during deep-sea diving by the submersible,Shinkai 2000. Their abundance in total cell counts and in lipopolysaccharide (LPS) concentration was found to decrease with increasing depth, and the decreasing profiles were shown to be linear on logarithmic scales. The total cell counts and the LPS concentration showed a linear relationship on arithmetic scales, and the LPS content per cell was found to be 1.02×10^–14 g.     

Iron nutritional status of the phytoplankton assemblage in the Okhotsk Sea during summer

To clarify the iron (Fe) nutritional status of the phytoplankton assemblage in the Okhotsk Sea, we conducted incubation experiments in summer 2006. Replicate surface seawater samples with the natural plankton community were incubated with three treatments: Fe enrichment; addition of the strong Fe chelator siderophore desferriferrioxime B (DFB) which strips Fe from the biologically accessible pool; and as a control, no addition. To prevent macronutrient limitation, we added surplus nutrients to all treatments. At all 4 stations in Sakhalin Bay near the mouth of the Amur River and around the east of Sakhalin Island, net specific growth rate showed no significant difference between the control and +Fe treatment, and was repressed in +DFB treatment both in large- and small-sized phytoplankton. These findings indicate that these waters contain sufficient bioavailable Fe and that the Amur River plume which is transported by the east Sakhalin current is a major source of the Fe. In the Bussol’ Strait, net specific growth rate in the control was significantly higher than +DFB treatment, suggesting a supply of bioavailable Fe through intense vertical mixing at this site. Iron enrichment treatment stimulated the net specific growth rate of large-sized phytoplankton, indicating that Fe still limits the growth for the large-sized phytoplankton assemblage, but not for small-sized phytoplankton, in this area. An index of Fe availability was defined to quantify the degree of ambient Fe availability in each station, and it revealed the spatial variability of ambient Fe availabilities among the sites.     

Importance of feeding on regenerable parts of prey for juvenile stone flounder Platichthys bicoloratus in estuarine habitats

Prey availability is one of the most important factors affecting the quality of nursery grounds. Estuaries play an important role as nursery grounds for juvenile stone flounder, but the mechanism behind the consistently high availability of prey has never been examined. This study investigates which prey is mainly selected by juvenile stone flounder (15–55 mm standard length) in the estuary of the Natori River, northern Japan. In a cage experiment, juveniles showed positive selection for the palps of the spionid polychaete Pseudopolydora kempi in March, and for the siphons of the bivalve Nuttallia olivacea in April, May and June in both sandy and muddy-sand habitats. This selective predation showed that sublethal predation on regenerable parts of invertebrates is important for stone flounder. Nuttallia olivacea, the dominant bivalve in the estuary, was more abundant and in better somatic condition in the sandy area in spite of the stronger siphon-cropping pressure by juvenile stone flounder. These results confirm that sublethal predation on highly abundant benthos plays an important role in forming estuarine habitats into areas of high prey availability for juvenile stone flounder, which leads to their high growth rate.     

Inter- and intraspecific variations of the chemical properties of high-Arctic mosses along water-regime gradients

We examined and compared the contents of organic chemical components (lignin-like compounds, total carbohydrates and extractives), carbon and nutrients (nitrogen, phosphorus, potassium, calcium, magnesium) among the mosses Calliergon giganteum, Hylocomium splendens, Racomitrium lanuginosum, and among three populations of H. splendens collected from habitats in contrasting water regimes in the Canadian high-arctic tundra. C:N:P ratios were analyzed among and within moss species. Mosses from hydric habitats had lower total carbohydrate and higher nutrients contents than did mosses from drier habitats; however, we found no intraspecific variations in nitrogen and calcium contents in the different populations of H. splendens along water-regime gradients. The contents in lignin-like compounds, extractives and carbon showed no clear trends along water-regime gradients. Mosses from hydric habitats had lower C:N, C:P and N:P ratios than mosses from drier habitats, although we found no intraspecific variations in C:N ratios in H. splendens along water-regime gradients. These results suggest that chemical properties of mosses, especially nutrient contents, are strongly correlated with water availability in high-Arctic tundra.