Microbial community dynamics and biodegradation of polycyclic aromatic hydrocarbons in polluted marine sediments in Hong Kong

Dynamics of microbial community and biodegradation of polycyclic aromatic hydrocarbons (PAHs) in polluted marine sediments, artificially spiked with a mixture of PAHs (fluorene, phenanthrene, fluoranthene and pyrene), were examined for a period of 60 days. Microbial communities were characterised by bacterial counts, ester-linked fatty acid methyl ester (EL-FAME) analysis and denaturing gradient gel electrophoresis (DGGE). A noted reduction in species diversity occurred only in the high PAH level treatment at onset. Both EL-FAME and DGGE demonstrated a marked shift in microbial community, in all the PAH level treatments, afterwards, with increases in the number of fatty acid degraders, the relative abundance of fatty acid biomarkers for gram-negative bacteria and a decrease in species diversity. The shift was also accompanied by the significant decrease in PAH concentrations. By the end of the experiment, diversity indices, based on both approaches, recovered when PAH concentrations declined to their background levels, except in the high PAH level treatment.     

Comparison of ecophysiological characteristics between introduced and indigenous mangrove species in China

Due to its rapid growth, the introduced mangrove species Sonneratia apetala from Bangladesh has been widely used in mangrove restoration in southeastern China since 1985. As an indigenous mangrove species in Hainan, China, Sonneratia caseolaris was also planted in Guangdong Province for afforestation purposes. Both species have developed well in their new habitats, but their ecophysiological differences with the native mangrove species have not been studied. In this study, leaf gas exchange, water and nitrogen use efficiencies of two Sonneratia species were compared with those of selected native mangrove species (Avicennia marina, Aegiceras corniculatum, Kandelia candel, and Excoecaria agallocha) in Hainan and Shenzhen. The introduced S. apetala maintained lower carbon assimilation rate (A) and photosynthetic nitrogen use efficiency (PNUE) than the indigenous S. caseolaris. In Shenzhen, the two introduced Sonneratia had comparable photosynthetic rates and water use efficiency (WUE) with the native mangrove species, except that PNUE in S. caseolaris was significantly higher than in the native mangrove species. The two Sonneratia species showed significant overlap in PNUE and long-term WUE. Photosynthetic parameters derived from leaf photosynthetic light–response curves and A–C_i curves also suggested lower carbon assimilation capacities for the introduced Sonneratia than for the native mangrove species in both study sites. The lower light compensation point (LCP) of two introduced Sonneratia in both study sites also indicated a better adaptation to a low light regime than the native mangrove species. The results of photosynthetic capacities indicated that the introduced mangrove species have little competitive advantage over local native mangrove species in their respective new habitats.     

Proton flux and radiation dose from galactic cosmic rays in the lunar regolith and implications for organic synthesis at the poles of the Moon and Mercury

Galactic cosmic rays are a potential energy source to stimulate organic synthesis from simple ices. The recent detection of organic molecules at the polar regions of the Moon by LCROSS (Colaprete, A. et al. [2010]. Science 330, 463–468, http://dx.doi.org/10.1126/science.1186986), and possibly at the poles of Mercury (Paige, D.A. et al. [2013]. Science 339, 300–303, http://dx.doi.org/10.1126/science.1231106), introduces the question of whether the organics were delivered by impact or formed in situ. Laboratory experiments show that high energy particles can cause organic production from simple ices. We use a Monte Carlo particle scattering code (MCNPX) to model and report the flux of GCR protons at the surface of the Moon and report radiation dose rates and absorbed doses at the Moon’s surface and with depth as a result of GCR protons and secondary particles, and apply scaling factors to account for contributions to dose from heavier ions. We compare our results with dose rate measurements by the Cosmic Ray Telescope for the Effects of Radiation (CRaTER) experiment on Lunar Reconnaissance Orbiter (Schwadron, N.A. et al. [2012]. J. Geophys. Res. 117, E00H13, http://dx.doi.org/10.1029/2011JE003978) and find them in good agreement, indicating that MCNPX can be confidently applied to studies of radiation dose at and within the surface of the Moon. We use our dose rate calculations to conclude that organic synthesis is plausible well within the age of the lunar polar cold traps, and that organics detected at the poles of the Moon may have been produced in situ. Our dose rate calculations also indicate that galactic cosmic rays can induce organic synthesis within the estimated age of the dark deposits at the pole of Mercury that may contain organics.     

Middle Miocene thermal metamorphism due to the infiltration of high-temperature fluid in the Sanbagawa metamorphic belt,southwest Japan

 The Middle Miocene Tobe hornfels in the Sanbagawa metamorphic belt, western Shikoku, southwest Japan, is characterized by an abnormally steep metamorphic gradient compared with other hornfelses associated with intrusive bodies. The basic hornfels, originally Sanbagawa greenschist rocks, is divided into the following three metamorphic zones: plagioclase, hornblende, and orthopyroxene. The plagioclase zone is defined by the appearance of calcic plagioclase, the hornblende zone by the assemblage of hornblende+calcic plagioclase+quartz, and the orthopyroxene zone is characterized by the assemblage of orthopyroxene + clinopyroxene + plagioclase + quartz. Calcic amphibole compositions change from actinolite to hornblende as a result of the continuous reactions during prograde metamorphism. Petrographical and thermometric studies indicate a metamorphic temperature range of 300–475°C for the plagioclase zone, 475–680°C for the hornblende zone, and 680–730°C for the orthopyroxene zone. The temperature gradient based on petrological studies is approximately 5°C/m, which is unusually high. Geological and petrological studies demonstrate that the hornfelses were formed by the focusing of high-temperature fluids through zones of relatively high fracture permeability. The steep thermal gradient in the Tobe hornfels body is consistent with a large fluid flux, greater than 8.3 × 10^–7 m³ m^–2S^–1, over the relatively short duration of metamorphism, approximately 100 years. Received: 10 October 1995 / Accepted: 28 May 1996     

Groundwater Resources and Their Role in Water Supply to Crimea

The processes of formation and distribution of the resources of fresh groundwater and surface water in the territory of Crimea Peninsula are considered. Water availability in the natural–historic and administrative regions of the republic is characterized. The proportions between different categories of groundwater resources are shown with their role in water supply to Crimea taken into account. The presentday development of groundwater resources is analyzed and the possible increase in water consumption meeting geoecological requirements is substantiated.     

Modeling of circulation and salinity in Hooghly estuary

The circulation and salinity distribution in the Hooghly Estuary have been studied by developing a two‐dimensional depth‐averaged numerical model for the lower estuary, where the flow is vertically well mixed. This has been coupled with a one‐dimensional model for the upper estuary, where the flow is assumed to be unidirectional and well mixed over the depth and breadth. The Hooghly River receives high freshwater discharge during the monsoon season (June to September), which has significant effect on the salinity distribution in the estuary. The model‐simulated currents, elevations, and salinities are in good agreement with observations during the dry season. However, during the wet season the computed salinities seem to deviate slightly from the observed values.     

Point-block covariance: A general solution for the two-dimensional stationary random functions

The application of the theory of random functions to problems of ore evaluation may involve computations of the covariance between the mean value of a given block and the functional value at a given point. However, an analytical solution for such a covariance does not exist for nonspherical blocks and for commonly applied models of covariance functions. Further, because this covariance is a function of the spatial arrangements of the block and the point, it has to be evaluated numerically each time for given point—block arrangements. This paper presents a readily available general solution to this problem in the form of a series of graduated curves which, together with some geometric manipulations, may be used to compute the covariance between a pointand a two-dimensional block for all possible point—block arrangements. The availability of the graph thus eliminates the necessity of using the time-absorbing programs on computers for such computations. Finally, many of the approximations that are made in order to avoid cumbersome covariance evaluations are no longer necessary due to the ease of such computations with the help of the graph provided.     

Numerical Modeling of Ice Fog in Interior Alaska Using the Weather Research and Forecasting Model

An ice microphysics parameterization scheme has been modified to better describe and understand ice fog formation. The modeling effort is based on observations in the Sub-Arctic Region of Interior Alaska, where ice fog occurs frequently during the cold season due to abundant water vapor sources and strong inversions existing near the surface at extremely low air temperatures. The microphysical characteristics of ice fog are different from those of other ice clouds, implying that the microphysical processes of ice should be changed in order to generate ice fog particles. Ice fog microphysical characteristics were derived with the NCAR Video Ice Particle Sampler during strong ice fog cases in the vicinity of Fairbanks, Alaska, in January and February 2012. To improve the prediction of ice fog in the Weather Research and Forecasting model, observational data were used to change particle size distribution properties and gravitational settling rates, as well as to implement a homogeneous freezing process. The newly implemented homogeneous freezing process compliments the existing heterogeneous freezing scheme and generates a higher number concentration of ice crystals than the original Thompson scheme. The size distribution of ice crystals is changed into a Gamma distribution with the shape factor of 2.0, using the observed size distribution. Furthermore, gravitational settling rates are reduced for the ice crystals since the crystals in ice fog do not precipitate in a similar manner when compared to the ice crystals of cirrus clouds. The slow terminal velocity plays a role in increasing the time scale for the ice crystals to settle to the surface. Sensitivity tests contribute to understanding the effects of water vapor emissions as an anthropogenic source on the formation of ice fog.     

N and O isotope effects during nitrate assimilation by unicellular prokaryotic and eukaryotic plankton cultures

In order to provide biological systematics from which to interpret nitrogen (N) and oxygen (O) isotope ratios of nitrate (¹⁵N/¹⁴N, ¹⁸O/¹⁶O, respectively) in the environment, we previously investigated the isotopic fractionation of nitrate during its assimilation by mono-cultures of eukaryotic algae (Granger et al., 2004). In this study, we extended our analysis to investigate nitrate assimilation by strains of prokaryotic plankton. We measured the N and O isotope effects, ¹⁵ε and ¹⁸ε, during nitrate consumption by cultures of prokaryotic strains and by additional eukaryotic phytoplankton strains (where ε is the ratio of reaction rate constants of the light vs. heavy isotopologues, ^lightk and ^heavyk; ε = ^lightk/^heavyk − 1 × 1000, expressed in per mil). The observed ¹⁵ε ranged from 5‰ to 8‰ among eukaryotes, whereas it did not exceed 5‰ for three cyanobacterial strains, and was as low as 0.4‰ for a heterotrophic α-protoeobacterium. Eukaryotic phytoplankton fractionated the N and O isotopes of nitrate to the same extent (i.e., ¹⁸ε ∼ ¹⁵ε). The ¹⁸ε:¹⁵ε among the cyanobacteria was also ∼1, whereas the heterotrophic α-proteobacterial strain, which showed the lowest ¹⁵ε, between 0.4‰ and 1‰, had a distinct ¹⁸ε:¹⁵ε of ∼2, unlike any plankton strain observed previously. Equivalent N vs. O isotope discrimination is thought to occur during internal nitrate reduction by nitrate reductase, such that the cellular efflux of the fractionated nitrate into the medium drives the typically observed ¹⁸ε:¹⁵ε of ∼1. We hypothesize that the higher in the ¹⁸ε:¹⁵ε of the α-proteobacterium may result from isotope discrimination by nitrate transport, which is evident only at low amplitude of ε. These observations warrant investigating whether heterotrophic bacterial assimilation of nitrate decreases the community isotope effects at the surface ocean.