Deep biological communities in the subduction zone of Japan from bottom photographs taken during “nautile” dives in the Kaiko project

Twenty-seven dives of the submersible “Nautile” in the subduction zone around Japan conducted in the French-Japanese Project Kaiko proved that fairly luxuriant benthic communities dominated by deep-sea giant clams of the genusCalyptogena (family Vesicomyidae) were consistently present on the accretionary prism at abyssal depths.Benthic communities characterized by three hitherto undescribed bivalves of the genusCalyptogena were found between depths of about 3800 and 4020 m at the mouth of Tenryu Canyon and at the top of basement swell of the Zenisu Ridge, both situated in the eastern Nankai subduction zone. Sporadic but discrete patches of organisms characterized by one more undescribed bivalve belonging to the genusCalyptogena were observed and collected between depths of 5130 and 5960 m on the landward wall of the Japan and Kouriles Trenches.Photographic inventories were prepared semiquantitatively using each series of bottom photographs taken in these areas with bow cameras of the submersible “Nautile”.Observations on the sporadic but dense distribution of the clams and other characteristic associated organisms match well with the scheme that communities sustained by chemosynthetic energy sources can be present at connate water seepages in subduction zones. These are to date the deepest record of benthic communities supposedly associated with chemosynthetic processes.     

The characterization and distribution of aerosol and gaseous species in the winter monsoon over the western pacific ocean

During the winters of 1981 and 1982, measurements were taken on two Japanese islands of the aerosol and gaseous species which had been carried by northwesterly monsoons over the Pacific Ocean. The aerosols were characterized as sea-salt particles; soil particles, and as particles of sulfate, nitrate, organics and elemental carbon. At Chichi-jima island, which is about 800 km away from the main islands of Japan, it was found that the level of the anthropogenic components of the aerosols was considerably higher than their background level. The mean concentrations of the species on the islands are given in tabular forms. According to a survey made on board a ferry boat, the aerosol and gaseous species were fairly uniformly distributed along the southern coast of the main Japanese islands.     

Elemental distribution of coastal sea and stream sediments in the island-arc region of Japan and mass transfer processes from terrestrial to marine environments

A total of 49 elements have been identified in 338 coastal sea sediment samples collected from an area situated off the Ise-Tokai region of Japan for a nationwide marine geochemical mapping project. The spatial distribution patterns of the elemental concentrations in coastal seas along with the existing geochemical maps in terrestrial areas were used to define the natural geochemical background variation, mass transport, and contamination processes. The elemental concentrations of coastal sea sediments are determined primarily by particle size and regional differences. Most elemental concentrations increase with a decrease in particle size. Some elements such as Ca, Mn, and Yb are found to exist in large quantities in coarse particles containing calcareous shells, Fe–Mn oxides, and felsic volcanic sediments. Regional differences reflect the mass transfer process from terrestrial areas to coastal seas and the influence of the local marine geology. An analysis of variance (ANOVA) reveals that for many elements, the particle size effect is predominant over regional difference. The mean chemical compositions of coastal sea sediments are similar to those of stream sediments in adjacent terrestrial areas and in the upper crust of Japan. This observation supports the fact that coastal sea sediments have certainly originated from terrestrial materials. However, the spatial distributions of elemental concentrations are not always continuous between the land and coastal seas. The scale of mass movement observed in marine geochemical maps occurs at a distance of 20 km from the river mouth. A detailed examination of the spatial distribution patterns of K (K₂O) and Cr concentrations suggests that terrestrial materials supplied through rivers are deposited near the shore initially, and then gravity-driven processes shift the sediments deeper into the basin. Contamination with heavy metals such as Zn, Cd and Pb was observed in coastal bays surrounded by urban and industrial areas. It is noteworthy that the areas with the highest concentration of these elements usually do not occur near the shore (not near the contamination source) but at the center of the bay. Unexpected low concentrations of Zn, Cd and Pb near shore may either be due to a decreased anthropogenic load in the most recent sediments or to dilution by unpolluted flood sediments.     

Depositional ages and characteristics of Middle–Upper Jurassic and Lower Cretaceous lacustrine deposits in southeastern Mongolia

Lower Cretaceous lacustrine oil shales are widely distributed in southeastern Mongolia. Due to the high organic carbon content of oil shale, many geochemical studies and petroleum exploration have been conducted. Although most of the oil shales are considered to be Early Cretaceous in age, a recent study reveals that some were deposited in the Middle Jurassic. The present study aims at establishing depositional ages and characteristics of the Jurassic and Cretaceous lacustrine deposits in Mongolia. The Lower Cretaceous Shinekhudag Formation is about 250 m thick and composed of alternating beds of shale and dolomite. The Middle Jurassic Eedemt Formation is about 150 m thick and composed of alternating beds of shale, dolomitic marl, and siltstone. The alternations of shale and dolomite in both formations were formed by lake level changes, reflecting precipitation changes. Shales were deposited in the center of a deep lake during highstand, while dolomites were formed by primary precipitation during lowstand. Based on the radiometric age dating, the Shinekhudag Formation was deposited between 123.8 ±2.0 Ma and 118.5 ±0.9 Ma of the early Aptian. The Eedemt Formation was deposited at around 165–158 Ma of Callovian–Oxfordian. The calculated sedimentation rate of the Shinekhudag Formation is between 4.7 ±2.6 cm/ky and 10.0 ±7.6 cm/ky. Shales in the Shinekhudag Formation show micrometer‐scale lamination, consisting of algal organic matter and detrital clay mineral couplets. Given the average thickness of micro‐laminae and calculated sedimentation rate, the micro‐lamination is most likely of varve origin. Both Middle–Upper Jurassic and Lower Cretaceous lacustrine oil shales were deposited in intracontinental basins in the paleo‐Asian continent. Tectonic processes and basin evolution basically controlled the deposition of these oil shales. In addition, enhanced precipitation under humid climate during the early Aptian and the Callovian–Oxfordian was another key factor inducing the widespread oil shale deposition in Mongolia.     

Failure process of masonry buildings during earthquake and associated casualty risk evaluation

Collapse of masonry structures during an earthquake is analyzed using the three-dimensional distinct element method (3D-DEM) code developed by the first author. The DEM is a numerical analysis technique, in which positions of elements are calculated by solving equations of motion step by step. Both individual and group behavior can be simulated. The structure is modeled as an assembly of distinct elements connected by virtual springs and dashpots, where elements come into contact. First, the validity of the developed 3D-DEM code is confirmed by comparing analytical results with static experimental results of masonry walls. Second, failure process of masonry buildings due to earthquake is investigated using DEM. Effects of reinforcing methods are also examined. Finally, injury to human bodies in the collapsing masonry buildings is also calculated. Assuming that occupants lie down on the floor, two types of casualty criteria are introduced and assessed.     

Micro-FTIR spectroscopic signatures of Bacterial lipids in Proterozoic microfossils

Precambrian microbial fossils show carbonaceous cellular structure, which often resemble in shape and size cyanobacteria and other prokaryotes. Morphological taxonomy of these minute, simple, and more or less degraded fossils is, however, often not enough to determine their precise phylogenetic positions. Here we report the results of micro-FTIR spectroscopic analyses of well-preserved microfossils in 850 Ma and 1900 Ma stromatolites, together with those of 8 species of extant prokaryotes and 5 of eukaryotes for comparison. These Proterozoic fossils have low CH₃/CH₂ absorbance ratios (R_3/2 < 0.5) of aliphatic CH moieties, suggesting selective preservation of long, straight, aliphatic carbon chains probably derived from bacterial membrane lipids. All the observed R_3/2 values of coccoids, filaments and amorphous organic matter resemble lipid fractions of extant Bacteria including cyanobacteria, but not Archaea. The results indicate that Proterozoic microfossils belong to Bacteria, which is consistent with the cyanobacterial origin inferred from morphology. Moreover, the R_3/2 value of fossilized cell would reflect chemical composition of its precursor membrane lipid, thus could be a useful new tracer for distinguishing Archaea, Bacteria and possibly Eucarya for fossilized and extant microorganisms.     

Wet surface resistance of forest canopy in monsoon Asia: Implications for eddy‐covariance measurement of evapotranspiration

During the Asian monsoon period, intense precipitation commonly occurs for an extended period in accompaniment with a reduction in solar radiation. This suggests that wet surface evapotranspiration is an important contributor to the total evapotranspiration. Therefore, investigating evapotranspiration over a wet canopy surface is critical to achieve a better understanding of water and energy cycles in Asia. In this study, we estimated surface resistances under wet conditions in a mixed forest influenced by the East Asian monsoon system. We showed that the surface resistance had a non‐negligible magnitude of about 30 sm^?1 even under wet conditions. We also found that the ratio between the actual and potential evapotranspiration depended on the friction velocity regardless of the time of day. Our analyses suggest that this dependency is tightly related to the underestimation of turbulent fluxes by the eddy‐covariance system under wet surface conditions. Together, our findings suggest that the wet surface resistance, although small, should be considered in simulating evapotranspiration because the forest ecosystem is strongly coupled to the overlying atmosphere. This could significantly improve the shortcomings of evapotranspiration measurement and modeling in Asian forest canopies influenced by the monsoon system. Copyright © 2012 John Wiley & Sons, Ltd.     

Alkalinization and acidification of stream water with changes in atmospheric deposition in a tropical dry evergreen forest of northeastern Thailand

Field surveys on atmospheric deposition and stream water chemistry were conducted in an evergreen forest in northeastern Thailand characterized by a tropical savanna climate with distinct dry and wet seasons. Atmospheric deposition of ion constituents by throughfall and stemflow was shown to increase in the beginning and end of the wet season, reflecting the precipitation pattern. The pH and electrical conductivity of stream water increased with alkalinity and base cation concentrations due to mineralization of organic matter by the first rain and retention of anions in soil during the start of the wet season. After initial alkalinization, the pH and alkalinity declined rapidly with the highest SO₄^2? concentration displayed in the middle towards the end of the wet season. The magnitude of peaks in SO₄^2? concentration (13.5–60.6 μmol_c/L) reflects deposition during the first 2 months of the wet season (March and April) in respective years (60.8–170 mol_c/ha). Release of SO₄^2? with H⁺, which is retained in soil during the early wet season, may cause acidification later in the season. The deposition and concentration of SO₄^2? declined over 6 years. However, the pH of stream water declined with increasing concentrations of SO₄^2? and other major ions. The release of materials accumulated in the ecosystem was facilitated by the decrease in SO₄^2? concentration/deposition and increased precipitation in the middle–late wet season. The retention‐release cycle of SO₄^2? largely contributed to both seasonal and interannual variations in stream water chemistry in the tropical savanna climate studied.     

Identification of the Unchanging Reference Component of Compositional Data from the Properties of the Coefficient of Variation

In analyses of compositional data, it is important to select a suitable unchanging component as a reference to detect the behavior of a single variable in isolation. This paper introduces two tests for detecting the unchanging component, based on a new approach that utilizes the coefficient of variation of component ratios. That is, the coefficient of variation of a compositional ratio is subject to change when the unchanging component is switched between the denominator and numerator, and the coefficient of variation tends to be small when the unchanging component occurs as the denominator against any arbitrary components (Test 1). In addition, the ratio of the component pair that gives the lowest coefficient of variation is most likely to represent the two unchanging components (Test 2). However, Tests 1 and 2 are not necessary and sufficient conditions for uniquely finding the unchanging component. To verify the effectiveness of the tests, 500 artificial datasets were analyzed and the results suggest that the tests are able to identify the unchanging component, although Test 1 underperforms when the dataset includes a component with skewness greater than 0.5, and Test 2 fails when the dataset includes components with a correlation coefficient greater than 0.75. These defects can be overcome by interpreting the two test results in a complementary manner. The proposed tests provide powerful yet simple criteria for identifying the unchanging component in compositional data; however, the reliability of this approach needs to be assessed in further studies.