A Sensitivity Analysis of the Waterline Method of Constructing a Digital Elevation Model for Intertidal Areas in ERS SAR scene of Eastern England

A sensitivity analysis of the waterline method of constructing a Digital Elevation Model (DEM) of an intertidal zone using remote sensing and hydrodynamic modelling is described. Variation in vertical height accuracy as a function of beach slope is investigated using a set of nine ERS Synthetic Aperture Radar (SAR) images of the Humber/Wash area on the English east coast acquired between 1992 and 1994. Waterlines from these images are heighted using a hydrodynamic tide-surge model and interpolated using block kriging. On 1:500 slope beaches, an average block height estimation standard deviation of 18–22 cm is achieved. This rises to 27 cm on 1:100 slope beaches, and 32 cm on 1:30 slope beaches. The average heighting error at different slopes is decomposed into components due to waterline heighting error, inadequate sensor resolution and interpolation inaccuracy. It is shown that, at 1:500 slope, waterline heighting error and interpolation inaccuracy are the main error sources, whilst at 1:30 slope, errors due to inadequate sensor resolution become dominant. The ability of the technique to generate intertidal DEMs for almost the entire coastal zone in a complete ERS SAR scene covering 100×100 km is demonstrated.     

Prograde metamorphic sequence of REE minerals in pelitic rocks of the Central Alps: implications for allanite–monazite–xenotime phase relations from 250 to 610 °C

The distribution of REE minerals in metasedimentary rocks was investigated to gain insight into the stability of allanite, monazite and xenotime in metapelites. Samples were collected in the central Swiss Alps, along a well‐established metamorphic field gradient that record conditions from very low grade metamorphism (250 °C) to the lower amphibolite facies (～600 °C). In the Alpine metapelites investigated, mass balance calculations show that LREE are mainly transferred between monazite and allanite during the course of prograde metamorphism. At very low grade metamorphism, detrital monazite grains (mostly Variscan in age) have two distinct populations in terms of LREE and MREE compositions. Newly formed monazite crystallized during low‐grade metamorphism (<440 °C); these are enriched in La, but depleted in Th and Y, compared with inherited grains. Upon the appearance of chloritoid (～440–450 °C, thermometry based on chlorite–choritoid and carbonaceous material), monazite is consumed, and MREE and LREE are taken up preferentially in two distinct zones of allanite distinguishable by EMPA and X‐ray mapping. Prior to garnet growth, allanite acquires two growth zones of clinozoisite: a first one rich in HREE + Y and a second one containing low REE contents. Following garnet growth, close to the chloritoid–out zone boundary (～556–580 °C, based on phase equilibrium calculations), allanite and its rims are partially to totally replaced by monazite and xenotime, both associated with plagioclase (± biotite ± staurolite ± kyanite ± quartz). In these samples, epidote relics are located in the matrix or as inclusions in garnet, and these preserve their characteristic chemical and textural growth zoning, indicating that they did not experience re‐equilibration following their prograde formation. Hence, the partial breakdown of allanite to monazite offers the attractive possibility to obtain in situ ages, representing two distinct crystallization stages. In addition, the complex REE + Y and Th zoning pattern of allanite and monazite are essential monitors of crystallization conditions at relatively low metamorphic grade.     

Identification of recycled continental material in the mantle from Sr,Nd and Pb isotope investigations

Pb, Nd and Sr isotope compositions of oceanic basalts have been used to identify recycled components of continent derivation in the mantle. The isotopic compositions of Sr, Nd and Pb, together with U, Pb, Sm, Nd, Rb, and Sr abundances have been determined for back-arc basalt glasses from the Scotia Sea and Parece Vela and West Philippine Basins, in addition to basalts from South Sandwich Islands, Ascension, St. Helena and Tristan da Cunha. Comparisons made between the isotopic compositions of South Sandwich Islands basalts and Atlantic MORB glasses permit the identification of recycled components of continent derivation in the source of the island arc basalts. Recycled Sr of continent derivation is also recognisable in back-arc basalt glasses from the Scotia Sea and Parece Vela and West Philippine Basins. However, contemporary reinjection of material with the isotopic structures similar to those identified as a component of island arc and back-arc regions cannot be the sole or dominant influence on the fine structure observed in MORB glasses from the Atlantic Ocean, nor the isotopic compositions of Tristan da Cunha, St. Helena and Ascension basalts. Recycled materials are likely to have been responsible for the generation of these heterogeneities only if they have been stored in the mantle for periods of time exceeding 10⁹ years.     

Genetic variability of wild Agave angustifolia populations based on AFLP: A basic study for conservation

Agave angustifolia is taken from wild populations in the desert of Sonora, Mexico, to make the alcoholic drink known as “bacanora”. An increase in the demand for this beverage has led to overexploitation of these agaves. We used AFLP to measure the genetic variability within and between natural populations of the species. The fixation index (FST) and population genetic distances (GD) were determined for three populations of A. angustifolia. At the clonal level, the expected heterozygosis (HE), the proportion of polymorphic loci (P), and the genetic similarity indices (GSIs) were lower in one population. Total GSI for adults and offshoots was 0.924. There were no differences in the GSI within or between the populations and dendrogram showed three groups that partially reflect the geographical distribution of the populations. Some degree of genetic variation between mother plants and their vegetatively produced rhizomes was observed. At the species level, total expected heterozygosity was high (HT = 0.314) with a P value of 78%, and intermediate gene flow (Nm = 1.18), giving rise to a moderate fixation index (FST = 0.175). Nm, FST and GD values observed, indicate that urgent measures must be implemented to preserve the genetic diversity.     

野生二粒小麦 Triticum dicoccoides抗杀锈病基因 YrH52分子定位的初步研究(英文)

主要对以色列野生二粒小麦赫尔蒙种群中分离获得的一个抗条锈病基因进行了分子定位研究 ,将源于赫尔蒙山具抗杀锈病的种系 T.dicoccides H52与普通的栽培种 Langdon进行杂交并创建了 F2 代遗传图。研究发现 H52种系抗条锈病的能力由一种显性基因控制 ,将其暂定名为 Yr H52。从 1 2 0个微卫星标记中 ,已经检测到来自亲本 91 %的多态性 ,而且从其中 56个微卫星分子标记中产生了 79个分离的位点 ,有 9个位点显示出了与 Yr H 52基因连锁 ,其重组率 0 .0 2～ 0 .3 5,遗传距离 2 .0 0～ 4 3 .3 7cm之间 ,L OD值 3 .56～ 54.2 2。由 1 0个微卫星位点和 Yr H52构建的染色体 1 B遗传图 ,其图距全长为 1 0 1 .5cm。Yr H52基因位于 Xgwm2 64 a和 Xgwm2 64 c之间 ,且与 Xgwm2 64 a、Xgwm1 8紧密连锁 ,两侧依次分别与 Xgwm1 3 1 a、Xgwm63 6b、Xgwm2 64 c、Xgwm4 0 3 a、Xgwm1 53、Xgwm550 a和 Xgwm1 2 4连锁。同时 ,Yr H52也与 REL P标记物 N or1紧密连锁 ,图距 1 .4 cm,L OD2 9.62。这显然与野生二粒小麦另一个抗条锈病基因 Yr1 5不同 ,研究证明 Yr1 5与 N or1图距是 1 1 .0 cm。     

Pathogenicity of vibrios in fish: An overview

Bacteria of the genus Vibrio are ubiquitously distributed in the marine environment. Due to the rapid expansion of intensive mariculture and the consequent deterioration of culture conditions, more and more Vibrio spp. have been recognized as pathogenic agents in outbreaks of vibriosis, a serious epizootic disease affecting most wild and farmed fish species worldwide, which has become the most important limiting factor for the development of intensive mariculture industry. Attempts have been made to understand the pathogenicity of vibrios in host fish with the ultimate aim of elucidating the best means for disease control. After an extensive literature survey of the recent advances in the field of fish vibriosis, the pathological changes, virulence factors and associated potential pathogenic mechanisms, transmission routes and related environmental factors involved in outbreak of vibriosis, as well as the controlling strategies are reviewed in the present paper.     

Environmental changes in the Hirnantian (upper Ordovician) of the Prague Basin,Czechoslovakia

Sedimentary sequences through the uppermost Ordovician (Hirnantian), Kosov Formation, are described. The Kosov Formation is a shale-dominated formation with two thin horizons of sandy diamictites near the base and two ‘flysch’ units separated by shales forming the main part of the formation, which is overlain abruptly by Silurian graptolitic shales. The diamictites are interpreted as of glaciomarine origin, probably deposited from coastal winter ice. The flysch units have many beds with hummocky cross-stratification and wave-ripples indicating deposition from storm generated currents above storm wave-base. The shales between the two flysch units have thin interbedded sandstones and siltstones with mainly unidirectional current structures, but also some wave-ripples, suggesting deposition around storm wave-base. The sequence shows clear evidence of two regressive phases, the second of which is the more pronounced, followed by rapid transgression near the Ordovician/Silurian boundary. The regressions and subsequent transgression are interpreted as being caused by Hirnantian glacioeustatic changes rather than being tectonic in origin. The importance of the glaciomarine diamictites is that they record the onset of cold climatic conditions in the region as being early Hirnantian. The disappearance of most of the fauna at about the same time might reflect the influence of low temperatures on faunal diversity, and could have significance for the end Ordovician extinction.