Unusual large-scale phytoplankton blooms in the equatorial Pacific

Unusual large-scale accumulations of phytoplankton occurred across 10,000 km of the equatorial Pacific during the 1998 transition from El Niño to La Niña. The forcing and dynamics of these phytoplankton blooms were studied using satellite-based observations of sea surface height, temperature and chlorophyll, and mooring-based observations of winds, hydrography and ocean currents. During the bloom period, the thermocline (nutricline) was anomalously shallow across the equatorial Pacific. The relative importance of processes that enhanced nutrient flux into the euphotic zone differed between the western and eastern regions of the blooms. In the western bloom region, the important vertical processes were turbulent vertical mixing and wind-driven upwelling. In contrast, the important processes in the eastern bloom region were wave-forced shoaling of nutrient source waters directly into the euphotic zone, along-isopycnal upwelling, and wind-driven upwelling. Advection by the Equatorial Undercurrent spread the largest bloom 4500 km east of where it began, and advection by meridional currents of tropical instability waves transported the bloom hundreds of kilometers north and south of the equator. Many processes influenced the intricate development of these massive biological events. Diverse observations and novel analysis methods of this work advance the conceptual framework for understanding the complex dynamics and ecology of the equatorial Pacific.     

Benthic mineralization rates at two locations in the southern North Sea

Benthic oxygen uptake, sulphate reduction and benthic bacterial production were measured at two contrasting locations in the southern North Sea: the shallow and turbulent Broad Fourteens area in the Southern Bight, and the deeper Oyster Grounds, a deposition area, where thermohaline stratification occurs during summer. Oxygen uptake and sulphate reduction showed a clear seasonal pattern in the Broad Fourteens area, indicating a supply of carbon to the benthic system that is closely related to the standing stock of carbon in the water column. This close benthic-pelagic coupling is probably due to the influence of the tide in this part of the North Sea, which keeps the water column permanently mixed. At the Oyster Grounds, no seasonal pattern was observed. Peaks in oxygen uptake and sulphate reduction were found in winter. Irregularly occurring events, such as storms and fishery-related activities, are likely to affect the benthic mineralization patterns in this area. Annual benthic carbon mineralization rates estimated from oxygen uptake rates were 44 gC·m⁻² at the Broad Fourteens, and 131 gC·m⁻² at the Oyster Grounds, of which 26 and 28%, respectively, could be attributed to sulphate reduction (assuming an annual sulphide reoxidation rate of 100%). Although sulphate reduction rates in the southern North Sea are higher than previously suggested, aerobic respiration is the most important pathway for benthic carbon mineralization at the stations visited. Production rates of benthic bacterial carbon measured with labelled leucine were much higher than carbon mineralization rates based on oxygen uptake or sulphate reduction. This may either imply a very high bacterial carbon conversion efficiency, or point to shortcomings in the accuracy of the techniques. A critical evaluation of the techniques is recommended.     

Parameters of JONSWAP spectral model for surface gravity waves—II. Predictability from real data

Monte Carlo simulation of wave spectra was carried out to provide an assessment of JONSWAP spectral model and parameters. The simulation method is found to be satisfactory because (a) it excludes the spectral variability due to geophysical factors from the sampling errors in the spectral estimates and the statistical uncertainty in determining the model parameters; and (b) the simulated spectra can represent ideal spectral estimates where the sampling errors have been minimized by increasing the degrees of freedom of the spectra. The latter (b) allows both the magnitude of sampling errors to be evaluated and errors due to statistical uncertainty to be isolated. Thus, the stimulation study provides a useful error analysis to assess the JONSWAP spectral model and parameters. For instance, it is found from the results that the sampling errors could be as high as 20% while errors due to uncertainty in determining the model parameter could be as high as 17%. However, the overall errors may be reduced to the minimum of approx. 15% if the simulated spectra have 80 degrees of freedom and constant values of σ_a and σ_b i.e. σ_a = 0.07 and σ_b = 0.09. This implies that the maximum accuracy of 85% may be achieved in JONSWAP spectral model even though the α parameter has been underestimated by about 1.5%. The overestimated values of γ might come from the underestimated α and the biased φ_m estimator caused by the statistical uncertainty in the presence of a sharp spectral peak. Although the scale parameters (α and φ_m) exhibit smaller errors and variability than the shape parameters (ψ, σ_a and σ_b), they are more sensitive to the degrees of freedom of the spectra and their estimators are not better than the estimators of shape parameters. The simulation experiments have also shown that simulated spectra at 20–40 degrees of freedom contain a substantial amount of sampling errors. Therefore, the measured wave spectra at the same degrees of freedom (20–40) are not suitable and should not be used for evaluating the accuracy of any wave spectral model.     

Tide-induced residual currents with Stokes and Ekman layers over an undulatory sea floor

Residual currents induced by the tidal current flowing over a rotating ridge, which is infinitely elongated in they-direction and the width of which is so large that the nonlinear effect is weak enough, have been analysed theoretically. The currents are restrained by Stokes and Ekman layers which are given through a constant viscosity. This study shows that the direction of the cross-isobath residual current just above the sea floor varies with the value off ^*(=Coriolis parameter/tide frequency), that the along-isobath residual current forms a clockwise circulation around the rotating ridge and that it is stronger asf ^* grows larger.     

Ship detection with high-resolution HF skywave radar

This paper presents an overview of ship detection by high-frequency (HF) skywave backscatter over-the-horizon radar (OTHR). Ships have been detected at ranges of 2000 km or more by OTHR that uses sufficient resolution in the radar spatial and Doppler frequency domains. The HF sea-echo Doppler spectrum limits the target signal-to-clutter ratio (SCR), as a function of the ocean wave-height distribution, wind direction, radio frequency, and ship target radial velocity. Maximum sea-clutter spectrum purity, and hence larger SCR, is achieved with the use of stable single-mode ionospheric propagation. Real-time measurement and interpretation of ionospheric propagation features therefore must guide the choice of OTHR operating frequency. Experimental data recorded at the ONR/SR1 Wide Aperture Research Facility (WARF) bistatic OTHR in central California demonstrate reliable ship detection in the Northeast Pacific Ocean. WARF transmits 1-MW average effective radiated power, using a linear frequency-modulated continuous-wave (FMCW) waveform, and receives with a 2.55-km broadside array of vertical monopole element pairs. Swept bandwidths as high as 200 kHz have been used. Sufficient spectral resolution is achieved with a coherent integration time (CIT) of 12.8 s. Longer CIT, and autoregressive (AR) spectral analysis techniques such as Marple's algorithm, have been used to improve Doppler resolution.     

Characterization of bacterial community structure in vestimentiferan tubeworm Ridgeia piscesae trophosomes

Terminal‐restriction fragment length polymorphisms (T‐RFLPs) were used to address the question whether there are multiple phylotypes of bacteria within the trophosome of the vestimentiferan tubeworm Ridgeia piscesae in addition to the known endosymbiont. Clone libraries were constructed to aid in the identification of the additional bacterial phylotypes. Individual R. piscesae specimens were collected from Juan de Fuca Ridge, Axial Caldera and Explorer Ridge, Magic Mountain. Clone library analyses revealed only one bacterial phylotype (expected R. piscesae endosymbiont) within the Explorer Ridge trophosomes. However, the Axial Caldera clone library revealed five operational taxonomic units (OTUs). Three of the resulting phylotypes detected (designated RAE) were putative thioautotrophic symbionts within the γ‐Proteobacteria which belonged to the anticipated endosymbiont group (RAE OTU 1), the Maorithyas hadalis symbiont II group (RAE OTU 3), and the Halothiobacillus group (RAE OTU 4). The remaining two phylotypes were most likely opportunistically derived. RAE OTU 5 was an α‐Proteobacterium within the Roseobacter group and RAE OTU 2 was within the Cytophaga–Flavobacterium–Bacteroidetes. T‐RFLP analyses revealed that all 15 trophosomes evaluated contained at least RAE OTUs 1 and 4. Five of the 15 trophosomes contained at least RAE OTUs 1, 3, and 4 and two of the trophosomes contained at least five RAE OTUs. Cluster analysis of the T‐RFLP data revealed three distinct clusters. The number of taxa within the trophosome may be an indication of the general health of the tubeworm. This study strongly suggests that we have discovered and identified more than one bacterial phylotype within the trophosome of vestimentiferan R. piscesae.     

Linkages between Alaskan sockeye salmon abundance, growth at sea, and climate, 1955–2002

We tested the hypothesis that increased growth of salmon during early marine life contributed to greater survival and abundance of salmon following the 1976/1977 climate regime shift and that this, in turn, led to density-dependent reductions in growth during late marine stages. Annual measurements of Bristol Bay (Bering Sea) and Chignik (Gulf of Alaska) sockeye salmon scale growth from 1955 to 2002 were used as indices of body growth. During the first and second years at sea, growth of both stocks tended to be higher after the 1976–1977 climate shift, whereas growth during the third year and homeward migration was often below average. Multiple regression models indicated that return per spawner of Bristol Bay sockeye salmon and adult abundance of western and central Alaska sockeye salmon were positively correlated with growth during the first 2 years at sea and negatively correlated with growth during later life stages. After accounting for competition between Bristol Bay sockeye and Asian pink salmon, age-specific adult length of Bristol Bay salmon increased after the 1976–1977 regime shift, then decreased after the 1989 climate shift. Late marine growth and age-specific adult length of Bristol Bay salmon was exceptionally low after 1989, possibly reducing their reproductive potential. These findings support the hypothesis that greater marine growth during the first 2 years at sea contributed to greater salmon survival and abundance, which in turn led to density-dependent growth during later life stages when size-related mortality was likely lower. Our findings provide new evidence supporting the importance of bottom-up control in marine ecosystems and highlight the complex dynamics of species interactions that continually change as salmon grow and mature in the ocean.     

The role of marine spatial planning in sea use management: The Belgian case

The expansion of offshore activities and the increasing need to meet international and national commitments to biodiversity conservation have led to an enhanced interest in marine spatial planning (MSP) as a tool for sea use management. Several European countries, on their own initiative or driven by European legislation and policy, have taken global leadership in implementing MSP. This article will discuss the Belgian experiences with MSP. It will give a short historical overview based on legal developments and review the implementation process of a ‘Master Plan’ as a spatial management policy for the Belgian Part of the North Sea. Additionally, this article will reflect on the research that has been done in Belgium to apply a land-use planning approach to the marine environment. The MSP process in Belgium shows that a spatial approach to sea use management is possible despite the lack of a legal zoning framework. However, it concludes that a legal basis for MSP, in addition to the current permit system, would provide a more strategic and integrated framework for ecosystem-based, sea use management.