The Biology of Upogebia pusilla (Petagna) (Decapoda, Thalassinidea) I. The Burrows

Abstract. The biology of the thalassinidean shrimp Upogebia pusilla was studied on a tidal flat in the Lagoon of Grado (Northern Adriatic). Burrows were investigated using in situ resin casting and with additional in situ and laboratory observations. Burrows show a basic pattern consisting of a U or a double U with turning chambers and a vertical shaft. Mean burrow diameter depends on animal size, it is smaller than the rigid carapace of the animal. Dimensions, distance between openings, depth of U, total depth, volume and surface are size dependent. The burrow wall is smooth and oxidized. Burrows are always inhabited by a single shrimp. Although they overlap, they are never interconnected. They are mainly constructed by compression of the sediment and are relatively permanent structures. A comparison of the burrows of Thalassinidea with regard to shape, number and appearance of openings, dimensions, properties of the burrow wall and dynamics is given.     

Integrating Uncertainty Theories with GIS for Modeling Coastal Hazards of Climate Change

Prediction of coastal hazards due to climate change is fraught with uncertainty that stems from complexity of coastal systems, estimation of sea level rise, and limitation of available data. In-depth research on coastal modeling is hampered by lack of techniques for handling uncertainty, and the available commercial geographical information systems (GIS) packages have only limited capability of handling uncertain information. Therefore, integrating uncertainty theory with GIS is of practical and theoretical significance. This article presents a GIS-based model that integrates an existing predictive model using a differential approach, random simulation, and fuzzy set theory for predicting geomorphic hazards subject to uncertainty. Coastal hazard is modeled as the combined effects of sea-level induced recession and storm erosion, using grid modeling techniques. The method is described with a case study of Fingal Bay Beach, SE Australia, for which predicted responses to an IPCC standard sea-level rise of 0.86 m and superimposed storm erosion averaged 12 m and 90 m, respectively, with analysis of uncertainty yielding maximum of 52 m and 120 m, respectively. Paradoxically, output uncertainty reduces slightly with simulated increase in random error in the digital elevation model (DEM). This trend implies that the magnitude of modeled uncertainty is not necessarily increased with the uncertainties in the input parameters. Built as a generic tool, the model can be used not only to predict different scenarios of coastal hazard under uncertainties for coastal management, but is also applicable to other fields that involve predictive modeling under uncertainty.     

Glucuronidation in the polar bear (Ursus maritimus)

Polar bears bioaccumulate lipophilic pollutants, including polychlorinated biphenyls (PCBs), into their bodies from their exclusive diet of marine organisms. Hydroxylated PCB metabolites (OH-PCBs) have been found in plasma, presumably due to CYP-dependent biotransformation of PCBs in liver. Little is known about the phase 2 metabolism of hydroxylated xenobiotics in polar bears. The objective of this study was to examine UDP-glucuronosyltransferase (UGT) activity with OH-PCBs and a hydroxylated polycyclic aromatic hydrocarbon, 3-hydroxy-benzo(a)pyrene (3-OH-BaP), in polar bear liver. Samples of frozen polar bear liver were used to prepare microsomes. UGT activity with 3-OH-BaP in Brij-treated microsomes, measured by a fluorescence assay, was readily measurable with protein concentrations in assay tubes of up to 10 g/ml, but dropped off very sharply at higher protein concentrations. The apparent Km for 3-OH-BaP was 1.71 +/- 0.04 microM, and Vmax 1.26 +/- 0.16 nmol/min/mg protein (mean +/- SD, n=3). UGT activities with a model tetrachloro-OH-PCB (4'-OH-CB72) and a model hexachloro-OH-PCB (4'-OH-CB159) were assayed with [14-C]-UDPGA and separation of the [14-C]-glucuronide by ion-pair extraction and thin-layer chromatography. [14-C]-glucuronide conjugates were readily formed by polar bear liver microsomes in the absence of added substrate, apparently from contaminants present in liver. This phenomenon was not observed using hepatic microsomes from laboratory-held catfish. Glucuronidation efficiency was much higher with 4'-OH-CB72 (Km 7.3 microM; Vmax 1.55 nmol/min/mg) than 4'-OH-CB159 (Km 16.1 microM; Vmax 0.46 nmol/min/mg). The identities of the aglycones present in polar bear liver are not known, but could include OH-PCBs or hydroxylated metabolites of other persistent organic pollutants. This study demonstrates that UGT with high activity for 3-OH-BaP and other substrates is present in polar bear liver.     

Functional responses for zooplankton feeding on multiple resources: a review of assumptions and biological dynamics

Modelers often need to quantify the rates at which zooplankton consume a variety of species, size classes and trophic types. Implicit in the equations used to describe the multiple resource functional response (i.e. how nutritional intake varies with resource densities) are assumptions that are not often stated, let alone tested. This is problematic because models are sensitive to the details of these formulations. Here, we enable modelers to make more informed decisions by providing them with a new framework for considering zooplankton feeding on multiple resources. We define a new classification of multiple resource responses that is based on preference, selection and switching, and we develop a set of mathematical diagnostics that elucidate model assumptions. We use these tools to evaluate the assumptions and biological dynamics inherent in published multiple resource responses. These models are shown to simulate different resource preferences, implied single resource responses, changes in intake with changing resource densities, nutritional benefits of generalism, and nutritional costs of selection. Certain formulations are further shown to exhibit anomalous dynamics such as negative switching and sub-optimal feeding. Such varied responses can have vastly different ecological consequences for both zooplankton and their resources; inappropriate choices may incorrectly quantify biologically-mediated fluxes and predict spurious dynamics. We discuss how our classes and diagnostics can help constrain parameters, interpret behaviors, and identify limitations to a formulation's applicability for both regional (e.g. High-Nitrate-Low-Chlorophyll regions comprising large areas of the Pacific) and large-scale applications (e.g. global biogeochemical or climate change models). Strategies for assessing uncertainty and for using the mathematics to guide future experimental investigations are also discussed.     

The Bengal Fan: Some preliminary results from ODP drilling

Three deep holes, with a maximum penetration of 960 m below sea floor, were drilled into the distal Bengal Fan just south of the equator during ODP Leg 116. The entire section recovered is dominated by sandy silt and mud turbidites derived from the Ganges Delta and from the continental margin of the western Bay of Bengal, interbedded with thin pelagic clays and with biogenic turbidites probably from a local sea mount source. The effects of Hi-Malayan uplift, sea level fluctuations, local tectonics, and fan channel/lobe processes have closely interacted to produce the observed sedimentary record of the past 17 million years since the early Miocene.Coauthors include: James R. Cochran, Lamont-Doherty Geological Observatory (Co-chief scientist); Dorrik A. V. Stow, Nottingham University, England (Co-chief scientist); Christian A. Auroux, Texas A & M University, USA (ODP staff scientist); Kazou Amano, Ibaraki University, Japan; Peter S. Balson, British Geological Survey, Keyworth, Notts, England; Jacques Boulegue, Pierre & Marie Curie University, Paris, France; Garrett W. Brass, University of Miami, Florida, USA; Jeffrey Corrigan, University of Texas, Austin, USA; Stefan Gartner, Texas A & M University, USA; Stuart A. Hall, University of Houston, Texas, USA; Silvia Iaccarino, University of Parma, Italy; Toshio Ishizuka, University of Tokyo, Japan; trena Kacmarska, Mount Allison University, New Brunswick, Canada; Heidemarie Kassens, Kiel University, West Germany; Gregory Leger, Dalhousie University, Halifax, Nova Scotia, Canada; Franca Proto Decima, University of Padova, Italy; C. V. Raman, Andhra University, Visakhapatnam, India; William W. Sager, Texas A & M University, USA; Kozo Takahashi, Woods Hole Oceanographic Institution, USA; Thomas Thompson, 580 Euclid Ave, Boulder, Colo, USA; Jean-Jacques Tiercelin, University of Bretagne, Brest, France; Mark Townsend, University of Nottingham, England; Andreas Wetzel, Tubingen University, West Germany; N. P. Wijayananda, National Aquatatic Resource Agency, Colombo, Sri Lanka; and Colin Williams, Lamont-Doherty Geological Observatory.