Geophysical-Archaeological Survey in Lake Tequesquitengo,Morelos, Mexico

In August 2009, a marine geophysical survey was conducted in Lake Tequesquitengo (located in the state of Morelos, Mexico) to delineate the extent of the remains of a small town that has been submerged since the mid 19th century. The survey consists of the acquisition and mapping of magnetic, single beam bathymetric and side-scan sonar data. A dual receiver marine GPS navigation system was used to position the boat during the survey. Except for the larger structural remains that are visible on the side scan sonar images, the magnetic anomaly map proved to be most useful in delineating the extent of the town. These anomalies exhibit short wavelength components in the area surrounding a submerged church, with the shortest wavelength components being confined to the area immediately east of the church. These short wavelength components are only observed near the church; therefore, we propose that they delineate the buried remnants of the submerged town.     

Deforestation and fragmentation of seasonal tropical forests in the southern Yucatán,Mexico (1990–2006)

The southern Yucatán (SY) has been recognized as a hotspot of biodiversity with great risk of deforestation. Land change analysis, based on classified Landsat TM and ETM?+?satellite imagery (1990, 2000 and 2006), was used to estimate the annual deforestation rates of 141 land management units of the SY, and spatial patterns of forest fragmentation around and within the Calakmul Biosphere Reserve (CBR), which comprises approximately one-third of the region. Results indicate a decrease in annual deforestation rates over 1990–2006, from 0.15% year^?1 to 0.06% year^?1, but with significant sub-regional variations in the quantity and rate of forest loss. Despite a decline in deforestation during this period, there was considerable fragmentation both inside and outside the CBR. While population pressures and the expansion of pasture have caused deforestation across the region, agricultural intensification, diversified income strategies and reserve conservation may have contributed to reduced forest loss during the study period.     

Population Structure of the SW Atlantic Estuarine Crab Neohelice granulata Throughout Its Range: a Genetic and Morphometric Study

Phylogeographic patterns of the SW Atlantic estuarine crab Neohelice granulata were examined using mitochondrial DNA cytochrome oxidase I sequences and analyzed together with morphometric data. Specimens were sampled during a 4-year period (2001?C2004) from 11 localities encompassing the full distributional range of this species along the SW Atlantic (22°57?? S to 42°25?? S). DNA sequences were obtained from 69 individuals belonging to seven localities, and morphometric variation in 12 continuous characters was analyzed for 646 crabs from ten localities. Strong genetic differentiation, consistent with a pattern of isolation-by-distance, was detected among all localities indicating that gene flow occurs mainly between neighboring populations. Analyses of molecular variance showed genetic subdivision between the southern (Argentina) and the northern (Brazil) sites, suggesting restricted gene flow at a regional scale. The genetic structure of this species could be divided into two distinct groups due to a limited gene flow between southern and northern regions as a consequence of larval dispersal patterns. Coastal currents in the vicinity of the Rio de la Plata likely act as a barrier to dispersal within the species range. Moreover, genetic data indicate that populations of N. granulata might have undergone a northward demographic expansion since the late Pleistocene. The morphometric analysis showed no geographical pattern of morphological differentiation, although there were differences among sampling sites.     

Urban Dispersion Modelling and Experiments in the Daytime and Nighttime Atmosphere

An analytical model of atmospheric dispersion in urban areas in both daytime and nighttime conditions is presented. The model is based on a Gaussian formulation where the horizontal and vertical diffusion coefficients are determined according to analytical theories. The model is validated with dispersion measurements from field experiments conducted in Oklahoma City, Salt Lake City, St. Louis and London, U.K. The theory is in good agreement with the data for both daytime and nighttime conditions. The data support the conclusion that the magnitude of the nighttime stratification in the urban atmosphere is weak; however, its effects on dispersion are not negligible. The predicted existence of two distinct dispersion regimes, in the near and in the far field, is also confirmed by the data. The good collapse of the data suggests that urban dispersion is governed by the characteristic length scales of atmospheric boundary-layer turbulence, rather than urban canopy length scales that are more likely to affect dispersion only in the vicinity of the source.     

Hurricane effects on subtropical pine rocklands of the Florida Keys

We investigate the effects of Hurricane Wilma??s storm surge (23?C24 October 2005) on the dominant tree Pinus elliottii var densa (South Florida slash pine) and rare plant species in subtropical pine rocklands of the Lower Florida Keys. We examine the role of elevation on species abundance in 1995 (Hurricane Betsy in 1965), 2005 (Hurricane Georges in 1998), and 2008 (Hurricane Wilma in 2005) to investigate if hurricanes influence abundance by eliminating plants at lower elevation on Big Pine Key, the largest island in the Lower Florida Keys. We compare densities before and after Hurricane Wilma over the 2005?C2008 sampling period and examine the role of elevation on changes in pine and rare species densities three years after Hurricane Wilma. We use elevation to assess the impact of hurricanes because elevation determined whether a location was influenced by storm surge (maximum surge of 2 m) in the Lower Florida Keys, where pine rocklands occur at a maximum elevation of 3 m. In 1995 (30 years after a major storm), elevation did not explain the abundance of South Florida slash pine or Chamaecrista lineata, but explained significant variation in abundance of Chamaesyce deltoidea. The latter two species are rare herbaceous plants restricted to pine rocklands. In 2008, 3 years after Hurricane Wilma, the positive relationship between elevation and abundance was strongest for South Florida slash pine, C. deltoidea, and C. lineata. Effects of Hurricane Wilma were not significant for rare species with wider distribution, occurring in plant communities adjacent to pine rocklands and in disturbed rocklands. Our results suggest that hurricanes drive population dynamics of South Florida slash pine and rare species that occur exclusively in pine rocklands at higher elevations. Rare species restricted to pine rocklands showed dramatic declines after Hurricane Wilma and were eliminated at elevations <0.5 m. Widely distributed rare species did not show significant changes in density after Hurricane Wilma. Abundance increased with elevation for South Florida slash pine and C. lineata after the hurricane. In an environment influenced by sea level rise, concrete plans to conserve pine ecosystems are warranted. Results from this study will help define conservation strategies by strengthening predictive understanding of plant responses to disturbance in the backdrop of sea level rise.     

Testing potential bias in marine plankton respiration rates by dark bottle incubations in the NW Iberian shelf: incubation time and bottle volume

The accurate determination of the balance between plankton production and respiration in the ocean is important for C budgets and global change predictions. Disagreements on the measurement of such a balance at different scales (from microbiological to biogeochemical) have produced a controversy over the trophic status of the ocean. This is especially striking in the oligotrophic open ocean, where plankton community O₂ consumption rates in 24 h incubations have frequently produced a net heterotrophic balance, but similar difficulties emerge in coastal systems. These results have been criticised due to the possibility that the standard 24 h in vitro incubations are biased because of the long incubation time needed and the so-called “bottle effect”.To study the influence of the incubation time and bottle volume on the measurement of plankton net metabolism, we carried out several time series experiments in the NW Iberian coastal system. Here we present measurements of plankton community respiration rates concurrently obtained through (1) standard in vitro changes in dissolved oxygen concentration after different incubation times ranging from 2 to 48 h, and with bottle volumes of 50, 125 and 570 mL, and (2) the decrease in the oxygen concentration measured every 20 s with oxygen microsensors, during 48 h. Our results refute the contention that 24 h dark 125 mL bottle incubations are systematically biased, and highlight the validity of oxygen microsensors to study the dynamics of natural marine plankton respiration.     

Parallel distributed computing using Python

This work presents two software components aimed to relieve the costs of accessing high-performance parallel computing resources within a Python programming environment: MPI for Python and PETSc for Python.MPI for Python is a general-purpose Python package that provides bindings for the Message Passing Interface (MPI) standard using any back-end MPI implementation. Its facilities allow parallel Python programs to easily exploit multiple processors using the message passing paradigm. PETSc for Python provides access to the Portable, Extensible Toolkit for Scientific Computation (PETSc) libraries. Its facilities allow sequential and parallel Python applications to exploit state of the art algorithms and data structures readily available in PETSc for the solution of large-scale problems in science and engineering.MPI for Python and PETSc for Python are fully integrated to PETSc-FEM, an MPI and PETSc based parallel, multiphysics, finite elements code developed at CIMEC laboratory. This software infrastructure supports research activities related to simulation of fluid flows with applications ranging from the design of microfluidic devices for biochemical analysis to modeling of large-scale stream/aquifer interactions.     

Recent evolution of Lake Arreo,northern Spain: influences of land use change and climate

We present a high-resolution, multiproxy reconstruction of the depositional history of Lake Arreo, northern Spain, for the last 60 years. We conducted sedimentological, geochemical and diatom analyses in short cores and made a detailed comparison with regional instrumental climate data (1952–2007), limnological monitoring of the lake (1992–2008) and recent land use changes that affect the lake catchment. Chronology is based on “floating” discontinuous varve counts and ¹³⁷Cs and ¹⁴C dates. Four periods were identified in the Lake Arreo recent history: (1) prior to 1963, varved facies intercalated with fine turbidite deposits, and diatom assemblages dominated by Cyclotella taxa indicate predominantly meromictic conditions, (2) from 1964 to 1978, permanent anoxia persisted in bottom waters, as shown by similar facies and diatom assemblages as before, though detrital layers were coarser, (3) from 1979 to 1994, sediment delivery to the lake increased and laminated, clastic facies were deposited, and (4) from 1995 to 2008, dominance of massive facies and an increase in Fragilaria tenera and Achnanthes minutissima reflect relatively lower lake levels, less frequent bottom anoxia with more frequent water column mixing, similar to modern conditions. The period 1952–1979 was a time of meromixis and varved facies deposition, and was characterized by higher rainfall and less intense agricultural pressure in the watershed. There were two short humid periods (1992–1993 and 1996–1998) when monitoring data show more anoxic weeks per year and relatively higher lake levels. Increased cultivation of small landholdings in 1963, and particularly after 1979, caused a large increase in sediment delivery to the lake. The inferred lake evolution is in agreement with monitoring data that suggest a transition from dominantly meromictic conditions prior to 1993–1994 to a predominantly monomictic pattern of circulation since then, particularly after 2000. The synergistic effects of intensive water extraction for irrigation and lower rainfall since 1979, and particularly since 1994, brought the long period of meromictic conditions in Lake Arreo to an end. Water balance and sediment delivery to the lake are dominant factors that control the limnological and mixing conditions in Lake Arreo and they must be considered in management and restoration plans.     

Global photometric properties of Asteroid (4) Vesta observed with Dawn Framing Camera

Dawn spacecraft orbited Vesta for more than one year and collected a huge volume of multispectral, high-resolution data in the visible wavelengths with the Framing Camera. We present a detailed disk-integrated and disk-resolved photometric analysis using the Framing Camera images with the Minnaert model and the Hapke model, and report our results about the global photometric properties of Vesta. The photometric properties of Vesta show weak or no dependence on wavelengths, except for the albedo. At 554 nm, the global average geometric albedo of Vesta is 0.38 ± 0.04, and the Bond albedo range is 0.20 ± 0.02. The bolometric Bond albedo is 0.18 ± 0.01. The phase function of Vesta is similar to those of S-type asteroids. Vesta’s surface shows a single-peaked albedo distribution with a full-width-half-max ∼17% relative to the global average. This width is much smaller than the full range of albedos (from ∼0.55× to >2× global average) in localized bright and dark areas of a few tens of km in sizes, and is probably a consequence of significant regolith mixing on the global scale. Rheasilvia basin is ∼10% brighter than the global average. The phase reddening of Vesta measured from Dawn Framing Camera images is comparable or slightly stronger than that of Eros as measured by the Near Earth Asteroid Rendezvous mission, but weaker than previous measurements based on ground-based observations of Vesta and laboratory measurements of HED meteorites. The photometric behaviors of Vesta are best described by the Hapke model and the Akimov disk-function, when compared with the Minnaert model, Lommel–Seeliger model, and Lommel–Seeliger–Lambertian model. The traditional approach for photometric correction is validated for Vesta for >99% of its surface where reflectance is within ±30% of global average.     

Weathering of ordinary chondrites from the Atacama Desert,Chile, by Mössbauer spectroscopy and synchrotron radiation X‐ray diffraction

Some terrestrial areas have climatic and geomorphologic features that favor the preservation, and therefore, accumulation of meteorites. The Atacama Desert in Chile is among the most important of such areas, known as DCA. This desert is the driest on Earth, one of the most arid, uninhabitable localities with semiarid, arid, and hyper‐arid conditions. The meteorites studied here were collected from within the DCA of San Juan and Pampa de Mejillones, located, respectively, in the Central Depression and the Coastal Range of the Atacama Desert. ⁵⁷Fe Mössbauer spectroscopy was used for quantitative analysis of the degree of weathering of the meteorites, through the determination of the proportions of the various Fe‐bearing phases and in particular the amount of oxidized iron in terrestrial alteration products. The abundance of ferric ions in weathered chondrites can be related to specific precursor compositions and to the level of terrestrial weathering. The aim of the study was the identification, quantification, and differentiation of the weathering products in the ordinary chondrites found in the San Juan and the Pampa de Mejillones areas of the Atacama Desert. The ⁵⁷Fe Mössbauer spectroscopy study was complemented by synchrotron radiation X‐ray diffraction and magnetic susceptibility measurements. The results allow a clear differentiation of the rate of weathering in meteorite samples collected from the San Juan versus the Pampa de Mejillones areas of the Atacama Desert.