Instrument development to search for biomarkers on mars: Terrestrial acidophile, iron-powered chemolithoautotrophic communities as model systems

Recent findings by the MER rover opportunity confirming the presence of iron minerals that can only be formed in the presence of water emphasize the study of analogous environments to Mars on Earth. The study of chemolithoautotrophic communities living in acidic iron-rich habitats is highly relevant in order to identify Mars analog environment-specific biomarkers. Iron oxidizing bacteria like Leptospirillum ferrooxidans and Acidithiobacillus ferrooxidans have ways of life for which it is feasible to identify a past or present hypothetical niche on Mars. We have developed a strategy for biomarker identification based on: (i) search for biosignatures on acid and metal-rich environments; (ii) development of an immunosensor microarray; and (iii) integration into an instrument for autonomous and remote operation. The instrument that we have built, called Signs Of LIfe Detector (SOLID), is capable of processing a variety of samples for the detection of specific biomarkers. Antibodies against several bacterial strains have been developed and tested in a microarray biosensor on SOLID. Tests with field samples have been successfully performed, allowing the detection of L. ferrooxidans, A. ferrooxidans present in sediment samples.     

The grain size distribution of matrix in primitive chondrites

The matrix of primitive chondrites is composed of submicron crystals embedded in amorphous silicates. These grains are thought to be the remains of relatively unprocessed dust from the inner regions of the protoplanetary disk. The matrix of primitive meteorites is often compared to chondritic porous interplanetary dust particles (CP-IDPs) which are believed to be of cometary origin, having accreted in the outermost regions of the solar nebula. Crystalline grains in CP-IDPs show evidence of a size–density relationship between the silicates and sulfides suggesting that these components experienced sorting prior to accretion. Here, we investigate whether such evidence of sorting is also present in the matrix constituents of primitive chondrites. We report findings from our study of grain size distributions of discrete silicate and opaque (sulfide and metal) grains within the matrix of the primitive meteorites Acfer 094 (C2-ung.), ALHA77307 (CO3), MIL 07687 (C3-ung.), and QUE 99177 (CR2). Mean radii of matrix silicate grains range from 103 nm in QUE 99177 to 2018 nm in MIL 07687. The opaque grains show a wider variation, with average radii ranging from 15 nm in QUE 99177 to 219 nm in MIL07687. Our results indicate that, in contrast to CP-IDPs, the size distribution of matrix components of these primitive meteorites cannot be explained by aerodynamic sorting that took place prior to accretion. We conclude that any evidence of sorting is likely to have been lost due to a greater variety and degree of processing experienced on these primitive chondrites than on cometary parent bodies.     

Thermal comfort of man in different urban environments

Summary On July 29, 1985, a hot summer day, biometeorological measurements were performed simultaneously in three different urban structures within the city of Munich and in the trunk space of a nearby tall spruce forest. Based on the results of these experiments the following thermophysiologically relevant biometeorological indices were calculated: Predicted mean vote, skin wettedness and physiologically equivalent temperature. These three indices are derived from different models for the human energy balance. They allow the assessment of the thermal components of the microclimates at the selected sites with regard to application in urban planning. The results quantitatively show the great heat stress in the urban structure street canyon, exposed to south, whereas in the trunk space of the tall spruce forest there is nearly an optimal climate even on hot summer days. Between these extremes the results for street canyon, exposed to north show a little higher heat load than for backyard with trees.

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Zusammenfassung An einem heißen Sommertag, dem 29. Juli 1985, wurden in drei Stadtstrukturen in München und im Stammraum eines nahegelegenen Fichtenhochwaldes zeitgleich biometeorologische Messungen durchgeführt. Mit den Meßergebnissen wurden folgende thermophysiologisch relevante biometeorologische Indizes berechnet: Predicted mean vote, Hautbenetzungsgrad und physiologisch äquivalente Temperatur. Diese drei Indizes beruhen auf verschiedenen Modellen zur menschlichen Energiebilanz. Mit den drei Indizes wurden die thermischen Komponenten der Mikroklimate an den ausgewählten Meßplätzen im Hinblick auf Stadtplanungsaufgaben bewertet. Die Ergebnisse zeigen quantitativ die relativ große Hitzebelastung bei der Stadtstruktur Straßenschlucht, nach Süd exponiert, während im Stammraum des Fichtenhochwaldes selbst an heißen Sommertagen nahezu optimale Bedingungen herrschen. Zwischen diesen Extremen liegen die Ergebnisse für die anderen Meßplätze, wobei für Straßenschlucht, nach Nord exponiert die Wärmebelastung etwas höher als für Innenhof mit Bäumen ist.

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With 6 Figures     

A singular evolutive extended Kalman filter to assimilate ocean color data in a coupled physical–biochemical model of the North Atlantic ocean

Within the European DIADEM project, a data assimilation system for coupled ocean circulation and marine ecosystem models has been implemented for the North Atlantic and the Nordic Seas. One objective of this project is to demonstrate the relevance of sophisticated methods to assimilate satellite data such as altimetry, surface temperature and ocean color, into realistic ocean models. In this paper, the singular evolutive extended Kalman (SEEK) filter, which is an advanced assimilation scheme where three-dimensional, multivariate error statistics are taken into account, is used to assimilate ocean color data into the biological component of the coupled system. The marine ecosystem model, derived from the FDM model [J. Mar. Res. 48 (1990) 591], includes 11 nitrogen and carbon compartments and describes the synthesis of organic matter in the euphotic zone, its consumption by animals of upper trophic levels, and the recycling of detritic material in the deep ocean. The circulation model coupled to the ecosystem is the Miami isopycnic coordinate ocean model (MICOM), which covers the Atlantic and the Arctic Oceans with an enhanced resolution in the North Atlantic basin. The model is forced with realistic ECMWF ocean/atmosphere fluxes, which permits to resolve the seasonal variability of the circulation and mixed layer properties. In the twin assimimation experiments reported here, the predictions of the coupled model are corrected every 10 days using pseudo-measurements of surface phytoplankton as a substitute to chlorophyll concentrations measured from space. The diagnostics of these experiments indicate that the assimilation is feasible with a reduced-order Kalman filter of small rank (of order 10) as long as a sufficiently good identification of the error structure is available. In addition, the control of non-observed quantities such as zooplankton and nitrate concentrations is made possible, owing to the multivariate nature of the analysis scheme. However, a too severe truncation of the error sub-space downgrades the propagation of surface information below the mixed layer. The reduction of the actual state vector to the surface layers is therefore investigated to improve the estimation process in the perspective of sea-viewing wide field-of-view sensor (SeaWiFS) data assimilation experiments.     

Use of remote sensing for evapotranspiration monitoring over land surfaces

Abstract

Monitoring evapotranspiration (ET) at large scales is important for assessing climate and anthropogenic effects on natural and agricultural ecosystems. This paper describes techniques used in evaluating ET with remote sensing, which is the only technology that can efficiently and economically provide regional and global coverage. Some of the empirical/statistical techniques have been used operationally with satellite data for computing daily ET at regional scales. The more complex numerical simulation models require detailed input parameters that may limit their application to regions containing a large database of soils and vegetation properties. Current efforts are being directed towards simplifying the parameter requirements of these models. Essentially all energy balance models rely on an estimate of the available energy (net radiation less soil heat flux). Net radiation is not easily determined from space, although progress is being made. Simplified approaches for estimating soil heat flux appear promising for operational applications. In addition, most ET models utilize remote sensing data in the shortwave and thermal wavelengths to measure key boundary conditions. Differences between the radiometric surface temperature and aerodynamic temperature can be significant and progress in incorporating this effect is evident. Atmospheric effects on optical data are significant, and optical sensors cannot see through clouds. This has led some to use microwave observations as a surrogate for optical data to provide estimates of surface moisture and surface temperature; preliminary results are encouraging. The approaches that appear most promising use surface temperature and vegetation indices or a time rate of change in surface temperature coupled to an atmospheric boundary layer model. For many of these models, differences with ET observations can be as low as 20% from hourly to daily time scales, approaching the level of uncertainty in the measurement of ET and contradicting some recent pessimistic conclusions concerning the utility of remotely sensed radiometric surface temperature for determining the surface energy balance.     

Origins and evolution of rhyolitic magmas in the central Snake River Plain: insights from coupled high-precision geochronology,oxygen isotope,and hafnium isotope analyses of zircon

We present new high-precision CA-ID-TIMS and in situ U–Pb ages together with Hf and O isotopic analyses (analyses performed all on the same grains) from four tuffs from the 15?10 Ma Bruneau–Jarbidge center of the Snake River Plain and from three rhyolitic units from the Kimberly borehole in the neighboring 10?6 Ma Twin Falls volcanic center. We find significant intrasample diversity in zircon ages (ranges of up to 3 Myr) and in δ¹⁸O (ranges of up to 6‰) and ε_Hf (ranges of up to 24 ε units) values. Zircon rims are also more homogeneous than the associated cores, and we show that zircon rim growth occurs faster than the resolution of in situ dating techniques. CA-ID-TIMS dating of a subset of zircon grains from the Twin Falls samples reveals complex crystallization histories spanning 10⁴–10⁶ years prior to some eruptions, suggesting that magma genesis was characterized by the cyclic remelting of buried volcanic rocks and intrusions associated with previous magmatic episodes. Age-dependent trends in zircon isotopic compositions show that rhyolite production in the Yellowstone hotspot track is driven by the mixing of mantle-derived melts (normal δ¹⁸O and ε_Hf) and a combination of Precambrian basement rock (normal δ¹⁸O and ε_Hf down to ??60) and shallow Mesozoic and Cenozoic age rocks, some of which are hydrothermally altered (to low δ¹⁸O values) by earlier stages of Snake River Plain magmatism. These crustal melts hybridize with juvenile basalts and rhyolites to produce the erupted rhyolites. We also observe that the Precambrian basement rock is only an important component in the erupted magmas in the first eruption at each caldera center, suggesting that the accumulation of new intrusions quickly builds an upper crustal intrusive body which is isolated from the Precambrian basement and evolves towards more isotopically juvenile and lower-δ¹⁸O compositions over time.     

Filamentation instability of Alfvén waves

The filamentation instability of finite amplitude left-hand circularly polarized Alfvén waves has been investigated taking into account the second-order density and magnetic field perturbations that are created by the Alfvén wave pressure. The minimum scale length and time over which the filamentation occurs, are found. Our results are applied to Alfvén waves that should scatter cosmic rays in the interstellar medium (ISM).     

Mineralogy and petrology of sample 67075 and the origin of lunar anorthosites

Plagioclase in cataclastic anorthosite 67075 occurs as angular matrix grains and as recrystallized clasts of micro-anorthosite. Olivines are Fe-rich and fall into two compositional groupings. Large grains of pyroxene show exceptionally well-developed exsolution lamellae analogous to those observed in pyroxenes from layered complexes. The low-Ca component in both pigeonites and augites shows varying degrees of inversion to orthopyroxene. The lattices of host and lamellae may deviate slightly (up to 2°) from the ideal orientation. Very slow cooling from magmatic temperatures is required to produce the coarse exsolution textures and inversion features. Augite macrocrystals are distinctly subcalcic indicating crystallization at temperatures around1100 ± 50°C while host-lamellae pairs and small grains in lithic clasts and matrix indicate reequilibration on a micron scale to temperatures less than 800°C. Pyroxene compositions tend to cluster into two groups both of which are among the most Fe-rich reported for highland pyroxenes. Ti and Al contents of pyroxenes are very low and Ti, Cr, and Mn follow well-established magmatic differentiation trends. The high Cr content may reflect low?O₂ conditions and/or early crystallization of olivine and plagioclase.The⁸⁷Sr/⁸⁶Sr ratios in lunar anorthosites are the lowest reported for any lunar rock. It is likely that anorthosites formed as cumulates during the major differentiation episode which occurred prior to～4.3AE. Recrystallization features are common and³⁹Ar/⁴⁰Ar ages cluster around 4.0 AE. This may be the result of the intense bombardment prior to 4.0 AE which caused repeated cycles of in-situ fracturing and granulation followed by recrystallization. The low siderophile element content and the inferred slow cooling indicate a plutonic source region (10km) not frequently plumbed by impact events. The Fe-rich silicates indicate crystallization from a melt at an advanced stage of fractionation. However, the low REE abundances are not consistent with late-stage crystallization. Plagioclase apparently crystallized relatively early and was concentrated by flotation and/or convection currents while the mafic minerals crystallized from a fractionated trapped liquid. The chemical, isotopic, and mineralogical data place stringent constraints on the nature of genetically related rocks and the relationship of anorthosites to other members of the ANT suite does not appear to be one ofsimple fractionation. The data presented in this paper are consistent with the Taylor-Jake?model of lunar evolution.