By design: The architecture of microbial redox cycling

The authors’ work on mine systems, combines field and laboratory integrated microbial geochemical investigation with high-resolution techniques enabling characterization and visualization at the bacterium scale (i.e. STXM). The results indicate a repeated motif of socially organized microbial cooperation occurring within microbial consortial macrostructures (pods). The pod structure directly enables the specific geochemical processes linked to the metabolic function of the consortial members. These microbially linked geochemical processes have important ramifications for bulk system geochemistry that were previously unknown. Results from two examples: (1) microbial metal interactions within AMD biofilms and (2) sulfur redox cycling by a novel consortia within mine waters, illustrate how the ecology of the pod consortia is linked to pod biogeochemical macrostructure as well as to the resulting geochemistry associated with pod metabolism. In both instances the pod structures enabled the associated consortia to carry out reactions not predicted by classic geochemical understanding of these systems. Investigation of AMD biofilm biogeochemical architecture capturing the micro-scale linkages amongst geochemical gradients, metal dynamics and depth resolved micro-organism community structure, illustrated a novel biomineralization process driven by biofilm associated pods controlling biofilm metal capture. Similarly, the groups’ recent discovery of an environmental S redox cycling, pod-forming, consortium revealed ecologically driven S cycling with previously unknown implications for both AMD mitigation and AMD carbon flux modeling. These results highlight how microbes cooperatively orchestrate their geochemical environment, underscoring the need to consider syntrophic community activity in environmental processes and the requirement for integrated, high-resolution techniques spanning geochemistry, molecular microbiology and imaging to reveal the biogeochemistry involved.     

Berm formation and dynamics on a gently sloping beach; the effect of water level and swash overtopping

Berm formation and morphological development of the beach face have been observed during a neap–neap tidal cycle on the gently sloping and accreting beach at Vejers, Denmark. During the field campaign, an intertidal bar migrated onshore and stabilized as a berm on the foreshore. A new intertidal bar occurred on the lower beach face, migrated onshore on the rising tide and finally merged with the pre‐existing berm. As the tide continued to rise, the new berm translated further onshore as an intertidal bar to the uppermost part of the foreshore. The sediment transport during the berm transition was onshore directed in the upper swash and offshore directed in the lower swash. This berm development can be described through both the neap‐berm, ridge‐and‐runnel and berm‐ridge development concepts proposed by Hine (Sedimentology 1979; 26: 333–351), and all three stages were observed during only three tidal cycles. The main factors controlling this fast transformation were the gentle slope of the cross‐shore profile, rapid water level translation rates, substantial swash overtopping of the berm, and low infiltration rates. Despite the onshore migration of intertidal bars and berm formation, no net foreshore accretion took place during the field campaign. This was largely due to the formation of rip channels with strong rip currents cutting through the intertidal bars and the berm, which acted as a sediment drain in the profile. Copyright © 2009 John Wiley & Sons, Ltd.     

The alignment of clusters using large-scale simulations

The alignment of clusters of galaxies with their nearest neighbours and between clusters within a supercluster is investigated using simulations of 512³ dark matter particles for ΛCDM and τ CDM cosmological models. Strongly significant alignments are found for separations of up to 15  h ⁻¹ Mpc in both cosmologies, but for the ΛCDM model the alignments extend up to separations of 30  h ⁻¹ Mpc. The effect is strongest for nearest neighbours, but is not significant enough to be useful as an observational discriminant between cosmologies. As a check of whether this difference in alignments is present in other cosmologies, smaller simulations with 256³ particles are investigated for four different cosmological models. Because of poor number statistics, only the standard CDM model shows indications of having different alignments from the other models.     

A new approach to the calculation of the cratering rate of the Earth over the last 125 ± 20 Myr

The recent cratering record of the surface of the Earth is re-examined using a new technique that concentrates on estimating the mean areas occupied by individual craters, together with the gradients of linear plots of crater numbers versus crater ages. This analysis indicates that the lower limit of the rate at which craters have been produced over the last 125±20 Myr is, for example, (12.0±0.7)×10⁻¹⁵ km⁻² yr⁻¹ for D 2.4 km craters, (9.5±0.6)×10⁻¹⁵ km⁻² yr⁻¹ for D 5.0 km craters, (6.5±0.5)×10⁻¹⁵ km⁻² yr⁻¹ for D 12 km craters, and (3.0±0.3)×10⁻¹⁵ km⁻² yr⁻¹ for D 22 km craters. These figures indicate that previous researchers have considerably overestimated the rate at which small (2.4< D <20 km) craters are being produced. It is also found that the relationship between crater production rate and crater diameter is not a simple power law in the 2.4< D <40 km diameter range. On the most stable areas of the Earth's continents, and over the last 125±20 Myr it seems that the rate at which craters are eroded below the detection limit does not depend on crater diameter throughout the above size range.     

Carbon isotope fractionation in phospholipid fatty acid biomarkers of bacteria and fungi native to an acid mine drainage lake

This study identifies isotope signatures associated with autotrophic and heterotrophic microbial communities that may provide a means to determine carbon cycling relationships in situ for acid mine drainage (AMD) sites. Stable carbon isotope ratios (δ¹³C) of carbon sources, bulk cells, and membrane phospholipids (PLFA) were measured for autotrophic and heterotrophic microbial enrichment cultures from a mine tailings impoundment in northern Ontario, Canada, and for pure strains of the sulfur oxidizing bacteria Acidithiobacillus ferrooxidans and Acidithiobacillus thiooxidans. The autotrophic enrichments had indistinguishable PLFA distributions from the pure cultures, and the PLFA cyc-C_19:0 was determined to be a unique biomarker in this system for these sulfur oxidizing bacteria. The PLFA distributions produced by the heterotrophic enrichments were distinct from the autotrophic distributions and the C_18:2 PLFA was identified as a biomarker for these heterotrophic enrichments. Genetic analysis (16S, 18S rRNA) of the heterotrophic cultures indicated that these communities were primarily composed of Acremonium fungi.Stable carbon isotope analysis revealed that bulk cellular material in all autotrophic cultures was depleted in δ¹³C by 5.6–10.9‰ relative to their atmospheric CO₂ derived carbon source, suggesting that inorganic carbon fixation in these cultures is carbon limited. Individual PLFA from these autotrophs were further depleted by 8.2–14.6‰ compared to the bulk cell δ¹³C, which are among the largest biosynthetic isotope fractionation factors between bulk cell and PLFA reported in the literature. In contrast, the heterotrophic bulk cells were not significantly fractionated in δ¹³C relative to their carbon source and heterotrophic PLFA ranged from 3‰ enriched to 4‰ depleted relative to the isotopic composition of their total biomass. These distinct PLFA biomarkers and isotopic fractionations associated with autotrophic and heterotrophic activity in this laboratory study provide potential biomarkers for delineating autotrophic and heterotrophic carbon cycling in AMD environments.     

Enrichment of Rare Earth Elements during magmatic and post-magmatic processes: a case study from the Loch Loyal Syenite Complex, northern Scotland

Concern about security of supply of critical elements used in new technologies, such as the Rare Earth Elements (REE), means that it is increasingly important to understand the processes by which they are enriched in crustal settings. High REE contents are found in syenite-dominated alkaline complexes intruded along the Moine Thrust Zone, a major collisional zone in north-west Scotland. The most northerly of these is the Loch Loyal Syenite Complex, which comprises three separate intrusions. One of these, the Cnoc nan Cuilean intrusion, contains two mappable zones: a Mixed Syenite Zone in which mafic melasyenite is mixed and mingled with leucosyenite and a Massive Leucosyenite Zone. Within the Mixed Syenite Zone, hydrothermal activity is evident in the form of narrow altered veins dominated by biotite and magnetite; these are poorly exposed and their lateral extent is uncertain. The REE mineral allanite is relatively abundant in the melasyenite and is extremely enriched in the biotite–magnetite veins, which have up to 2 % total rare earth oxides in bulk rock analyses. An overall model for development of this intrusion can be divided into three episodes: (1) generation of a Light Rare Earth Element (LREE)-enriched parental magma due to enrichment of the mantle source by subduction of pelagic carbonates; (2) early crystallisation of allanite in melasyenite, due to the saturation of the magma in the LREE; and (3) hydrothermal alteration, in three different episodes identified by petrography and mineral chemistry, generating the intense enrichment of REE in the biotite–magnetite veins. Dating of allanite and titanite in the biotite–magnetite veins gives ages of c. 426 Ma, overlapping with previously published crystallisation ages for zircon in the syenite.     

Impact of stratospheric variability on tropospheric climate change

An improved stratospheric representation has been included in simulations with the Hadley Centre HadGEM1 coupled ocean atmosphere model with natural and anthropogenic forcings for the period 1979–2003. An improved stratospheric ozone dataset is employed that includes natural variations in ozone as well as the usual anthropogenic trends. In addition, in a second set of simulations the quasi biennial oscillation (QBO) of stratospheric equatorial zonal wind is also imposed using a relaxation towards ERA-40 zonal wind values. The resulting impact on tropospheric variability and trends is described. We show that the modelled cooling rate at the tropopause is enhanced by the improved ozone dataset and this improvement is even more marked when the QBO is also included. The same applies to warming trends in the upper tropical troposphere which are slightly reduced. Our stratospheric improvements produce a significant increase of internal variability but no change in the positive trend of annual mean global mean near-surface temperature. Warming rates are increased significantly over a large portion of the Arctic Ocean. The improved stratospheric representation, especially the QBO relaxation, causes a substantial reduction in near-surface temperature and precipitation response to the El Chichón eruption, especially in the tropical region. The winter increase in the phase of the northern annular mode observed in the aftermath of the two major recent volcanic eruptions is partly captured, especially after the El Chichón eruption. The positive trend in the southern annular mode (SAM) is increased and becomes statistically significant which demonstrates that the observed increase in the SAM is largely subject to internal variability in the stratosphere. The possible inclusion in simulations for future assessments of full ozone chemistry and a gravity wave scheme to internally generate a QBO is discussed.     

Extreme weather events and climate change concern

This paper examines whether experience of extreme weather events—such as excessive heat, droughts, flooding, and hurricanes—increases an individual’s level concern about climate change. We bring together micro-level geospatial data on extreme weather events from NOAA’s Storm Events Database with public opinion data from multiple years of the Cooperative Congressional Election Study to study this question. We find evidence of a modest, but discernible positive relationship between experiencing extreme weather activity and expressions of concern about climate change. However, the effect only materializes for recent extreme weather activity; activity that occurred over longer periods of time does not affect public opinion. These results are generally robust to various measurement strategies and model specifications. Our findings contribute to the public opinion literature on the importance of local environmental conditions on attitude formation.     

The Falkland Islands’ palaeoecological response to millennial‐scale climate perturbations during the Pleistocene–Holocene transition: Implications for future vegetation stability in the southern ocean islands

Oceanic island flora is vulnerable to future climate warming, which is likely to promote changes in vegetation composition, and invasion of non‐native species. Sub‐Antarctic islands are predicted to experience rapid warming during the next century; therefore, establishing trajectories of change in vegetation communities is essential for developing conservation strategies to preserve biological diversity. We present a Late‐glacial‐early Holocene (16 500–6450 cal a bp ) palaeoecological record from Hooker's Point, Falkland Islands (Islas Malvinas), South Atlantic. This period spans the Pleistocene‐Holocene transition, providing insight into biological responses to abrupt climate change. Pollen and plant macrofossil records appear insensitive to climatic cooling during the Late‐glacial, but undergo rapid turnover in response to regional warming. The absence of trees throughout the Late‐glacial‐early Holocene enables the recognition of far‐travelled pollen from southern South America. The first occurrence of Nothofagus (southern beech) may reflect changes in the strength and/or position of the Southern Westerly Wind Belt during the Late‐glacial period. Peat inception and accumulation at Hooker's Point is likely to be promoted by the recalcitrant litter of wind‐adapted flora. This recalcitrant litter helps to explain widespread peatland development in a comparatively dry environment, and suggests that wind‐adapted peatlands can remain carbon sinks even under low precipitation regimes. © 2019 The Authors. Journal of Quaternary Science Published by John Wiley & Sons Ltd.