Cloning of a chub metallothionein cDNA and development of competitive RT-PCR of chub metallothionein mRNA as a potential biomarker of heavy metal exposure

Metallothionein has been assayed in a range of aquatic animal tissues as an indicator of metal exposure. We sequenced chub (Leuciscus cephalus) metallothionein cDNA which showed over 90% homology to common carp, goldfish and stone loach and 77% homology to rainbow trout sequences for metallothionein. We then used the extended primer method to develop an accurate quantitative competitive RT-PCR assay for metallothionein mRNA. RT-PCR was used to measure metallothionein mRNA in feral chub from a range of field sites, with different levels of heavy metal pollution, in the West Midlands, UK. Measurements were complemented by analysis of liver and gill metallothionein protein by capillary electrophoresis. There was no significant difference in the metallothionein protein levels between fish of different rivers and there was no evidence of elevation of mRNA at the sites of highest metal exposure. The level of metal exposure (e.g. zinc, nickel and cadmium each ranging between 15 and 28 microg/l ) at the pH (7.5-8.5) of these rivers appears insufficient to elevate hepatic or gill metallothionein in chub. A lack of elevation of hepatic metallothionein mRNA in chub exposed to zinc, copper and manganese for 24 h and 10 days in the laboratory also suggests a non-responsiveness of this species.     

利用基于环境因子的动态产量模型评估西南大西洋阿根廷滑柔鱼

西南大西洋阿根廷滑柔鱼,Illex argentinus,巴塔哥尼亚南部群体是重要的经济种类。海洋环境因子在柔鱼资源分布中起着重要的作用。本研究利用基于环境因子的动态产量模型评估2000-2010年的滑柔鱼的资源量。假设海洋环境因子（滑柔鱼产卵场最适宜海表温度占比）影响动态产量模型的参数K,DIC值表明在正态分布和均匀分布下均是基于环境因子的评估模型优于基本的动态产量模型。阿根廷滑柔鱼的最大可持续产量（MSY）在351600吨到685 100吨之间,资源生物量在1322400吨到1 803 000吨之间,其捕捞死亡系数均小于F_0.1和F_MSY,资源处在良好状态,没有遭受过度捕捞。本研究为应用环境因子在柔鱼类的资源评估与管理提中供了科学的参考方法。     

Factors influencing biodeposit production by the New Zealand freshwater mussel Echyridella menziesii

Laboratory experiments on the New Zealand freshwater mussel Echyridella menziesii were used to investigate the short-term effects (7–8 days) of food type on rates of biodeposition and benthic substrate respiration. Post-feeding biodeposition rates ranged from 0.34 to 1.52?mg?g^?1?h^?1 (mean?=?0.50?mg g^?1?h^?1) and were unaffected by the addition of toxin-producing Microcystis. Addition of suspended sediment (30?mg?L^?1) visibly altered substrate composition, and increased total and inorganic biodeposit production rates by 24–33% compared to mussels fed commercial phytoplankton stock. Biodeposition rates of mussels in lake bed substrates were 38% higher than those in silica sand for identical feeding regimes, suggesting that a significant proportion of material produced in this experiment could have been derived from feeding on organic matter in the lake bed sediments. Respiration rates were higher in treatments with Microcystis but were unaffected by the presence of mussels. This laboratory study suggests that biodeposition by E. menziesii is resilient to short-term exposure to Microcystis, and highlights the ability of mussels to alter benthic substrate composition by incorporating suspended sediment into substrates.     

Complex refractive index of Martian dust: Wavelength dependence and composition

Mariner 9 ultraviolet spectra of the 1971 dust clouds were analyzed to obtain the phase function times single scattering albedo of the dust particles. The phase functions were matched with Mie scattering calculations for size distributions of spheres of homogeneous and isotropic material. The absorption index of the dust particles was found to increase with decreasing wavelenght from 350 nm down to about 210 nm, and drop off shortward of this wavelength. A structural shoulder occurs in the absorption spectrum between 240 and 250 nm. Titanium dioxide (anatase) has the correct transitions at 210 and 250 nm to match the absorption curve of Martian dust, and is proposed as a candidate constituent in Martian surface material. The spectral neutrality of TiO₂ between 0.5 and 4 μm is consistent with visible and infrared observations of Mars. The high refractive index of TiO₂ can explain the large refringence of Martian dust. The titanium dioxide content of the dust particles is estimated to be a few percent or less. Uncertainties in the results due to limitations in the model and data are discussed.     

Structural and isotopic microanalysis of presolar SiC from supernovae

Abstract– We report on the microstructure, crystallography, chemistry, and isotopic compositions of seven SiC X grains and two mainstream grains from the Murchison meteorite. TEM crystallographic analysis revealed that the X grains (approximately 3 μm) are composed of many small crystals (24–457 nm), while the similarly sized mainstream grains are composed of only a few crystals (0.5–1.7 μm). The difference in crystal size likely results from differences in their formation environments: the X grain crystals evidently formed under conditions of greater supersaturation and rapid growth compared to their mainstream counterparts. However, the same polytypes are observed in both mainstream and X grains. Six X grains and both mainstream grains are entirely the 3C‐SiC polytype and one X grain is an intergrowth of the 3C‐SiC and 2H‐SiC polytypes. EDXS measurements indicate relatively high Mg content in the X grains (≲5 atomic%), while Mg was undetectable in the mainstream grains. The high Mg content is probably from the decay of ²⁶Al into ²⁶Mg. Estimates of the ²⁶Al/²⁷Al ratios, which range from 0.44–0.67, were made from elemental Mg/Al ratios. This range is consistent with the ²⁶Al/²⁷Al ratios inferred from previous isotopic measurements of X grains. We also report the first direct observations of subgrains in X grains, including the first silicides [(Fe,Ni)_nSi_m]. Diffraction data do not match any previously observed presolar phases, but are a good fit to silicides, which are predicted stable SN condensates. Eight subgrains with highly variable Ni/Fe ratios (0.12–1.60) were observed in two X grains.     

Summer light‐trap catches of adult Trichoptera in hill‐country catchments of contrasting land use,Waikato, New Zealand

The distribution of adult Trichoptera in light traps was investigated alongside nine streams draining catchments under native forest, pine forest, or pasture near Hamilton, Waikato, New Zealand. The aim of the study was to determine the relationship between abundance, taxonomic richness, and community composition with respect to land use during summer, and to evaluate the use of adult Trichoptera compared with benthic invertebrates as potential bio‐indicators of the effectiveness of land‐management changes. Adult Trichoptera faunas alongside the native streams were dominated by Hydrobiosidae, Conoesucidae, and Helicopsychidae (each >10% of total Trichoptera numbers for at least two of the three sites), whereas Leptoceridae, Oeconescidae, and Hydrobiosidae were relatively abundant alongside at least two of the pine sites. Adult Trichoptera faunas at the pasture sites were strongly dominated by Hydroptilidae which made up 47–85% of numbers caught at all sites. The mean number of individuals and taxa caught in light traps increased from November to January and then declined in February for all land‐use types. Overall, total numbers and taxonomic richness of adult Trichoptera were significantly lower at the pine sites compared to the pasture or native sites. TWINSPAN classification of benthic invertebrates collected in November clearly differentiated sites based on land use for presence/absence and percentage abundance data. A similar pattern was evident for most sites when adult Trichoptera faunas were used for the four sampling dates combined, suggesting that light trapping has potential as a tool for bio‐monitoring.     

Evaluating techniques for sampling stream crayfish (Paranephrops planifrons)

We evaluated several capture and analysis techniques for estimating abundance and size structure of freshwater crayfish (Paranephrops planifrons) (koura) from a forested North Island, New Zealand stream to provide a methodological basis for future population studies. Direct observation at night and collecting with baited traps were not considered useful. A quadrat sampler was highly biased toward collecting small individuals. Handnetting at night and estimating abundances using the depletion method were not as efficient as handnetting on different dates and analysing by a mark‐recapture technique. Electrofishing was effective in collecting koura from different habitats and resulted in the highest abundance estimates, and mark‐recapture estimates appeared to be more precise than depletion estimates, especially if multiple recaptures were made. Handnetting captured more large crayfish relative to electrofishing or the quadrat sampler.     

Estimation of hysteretic energy demand using concepts of modal pushover analysis

Hysteretic energy dissipation in a structure during an earthquake is the key factor, besides maximum displacement, related to the amount of damage in it. This energy demand can be accurately computed only through a nonlinear time‐history analysis of the structure subjected to a specific earthquake ground acceleration. However, for multi‐story structures, which are usually modeled as multi‐degree of freedom (MDOF) systems, this analysis becomes computation intensive and time consuming and is not suitable for adopting in seismic design guidelines. An alternative method of estimating hysteretic energy demand on MDOF systems is presented here. The proposed method uses multiple ‘generalized’ or ‘equivalent’ single degree of freedom (ESDOF) systems to estimate hysteretic energy demand on an MDOF system within the context of a ‘modal pushover analysis’. This is a modified version of a previous procedure using a single ESDOF system. Efficiency of the proposed procedure is tested by comparing energy demands based on this method with results from nonlinear dynamic analyses of MDOF systems, as well as estimates based on the previous method, for several ground motion scenarios. Three steel moment frame structures, of 3‐, 9‐, and 20‐story configurations, are selected for this comparison. Bias statistics that show the effectiveness of the proposed method are presented. In addition to being less demanding on the computation time and complexity, the proposed method is also suitable for adopting in design guidelines, as it can use response spectra for hysteretic energy demand estimation. Copyright © 2008 John Wiley & Sons, Ltd.