Fine‐scale diet of the Australian sea lion (Neophoca cinerea) using DNA‐based analysis of faeces

We applied DNA‐based faecal analysis to determine the diet of female Australian sea lions (n = 12) from two breeding colonies in South Australia. DNA dietary components of fish and cephalopods were amplified using the polymerase chain reaction and mitochondrial DNA primers targeting the short (~100 base pair) section of the 16S gene region. Prey diversity was determined by sequencing ~50 amplicons generated from clone libraries developed for each individual. Faecal DNA was also combined and cloned from multiple individuals at each colony and fish diversity determined. Diets varied between individuals and sites. Overall, DNA analysis identified a broad diversity of prey comprising 23 fish and five cephalopod taxa, including many species not previously described as prey of the Australian sea lion. Labridae (wrasse), Monacanthidae (leatherjackets) and Mullidae (goat fish) were important fish prey taxa. Commonly identified cephalopods were Octopodidae (octopus), Loliginidae (calamary squid) and Sepiidae (cuttlefish). Comparisons of fish prey diversity determined by pooling faecal DNA from several samples provided a reasonable but incomplete resemblance (55–71%) to the total fish diversity identified across individual diets at each site. Interpretation of diet based on the recovery of prey hard‐parts identified one cephalopod beak (Octopus sp.) and one fish otolith (Parapriacanthus elongatus). The present study highlights the value of DNA‐based analyses and their capabilities to enhance information of trophic interactions.     

Sulfur Concentration in Geochemical Reference Materials by Solution Inductively Coupled Plasma‐Mass Spectrometry

With implications for the origin of ore deposits, redox state of the atmosphere, and effects of volcanic outgassing, understanding the sulfur cycle is vital to our investigation of Earth processes. However, the paucity of sulfur concentration measurements in silicate rocks and the lack of well‐calibrated reference materials with concentrations relevant to the rocks of interest have hindered such investigations. To aid in this endeavour, this study details a new method to determine sulfur concentration via high mass resolution solution inductively coupled plasma‐mass spectrometry (ICP‐MS). The method is based on an aqua regia leach, involving relatively rapid sample preparation and analysis, and uses small test portion masses (< 50 mg). We utilised two independently prepared standard solutions to calibrate the analyses, resulting in 4% accuracy, and applied the method to eight geochemical reference materials. Measurements were reproducible to within ~ 10%. Sulfur concentrations and isotopes of six reference materials were measured additionally by elemental analyser‐combustion‐isotope ratio mass spectrometry to independently evaluate the accuracy of the ICP‐MS method. Reference materials that yielded reproducible measurements identical to published values from other laboratories (JGb‐1, JGb‐2 and MAG‐1) are considered useful materials for the measurement of sulfur. Reference materials that varied between studies but were reproducible for a given test portion perhaps suffer from sample heterogeneity and are not recommended as sulfur reference materials.     

Apparent and actual galaxy cluster temperatures

The redshift evolution of the galaxy cluster temperature function is a powerful probe of cosmology. However, its determination requires the measurement of redshifts for all clusters in a catalogue, which is likely to prove challenging for large catalogues expected from XMM-Newton , which may contain of the order of 2000 clusters with measurable temperatures, distributed around the sky. In this paper we study the apparent cluster temperature, which can be obtained without cluster redshifts. We show that the apparent temperature function itself is of limited use in constraining cosmology, and so concentrate our focus on studying how apparent temperatures can be combined with other X-ray information to constrain the cluster redshift. We also briefly study the circumstances under which the non-thermal spectral features can provide redshift information.     

A New Geochemical Classification of Elements

The geochemical classification proposed by Goldschmidt was based on meteoritic analysis and elemental partition in blast furnace. There are many surprises when applied to the discussion of natural occurrences. A modified classification of elements based on basic chemical properties and their occurrences. A modified classification of elements based on basic chemical properties and their occurrences in nature is, therefore, proposed for students learning geochemistry and geologists working in the field. Elements are classified into six groups including lithophile, oxyphile, siderophile, chalcophile, biophile, and atmophile elements. Five terms are taken from Goldshcmidt's original classification. Oxyphile is a new term.     

What can ecological science tell us about opportunities for carbon sequestration on arid rangelands in the United States?

Scientific interest in carbon sequestration on rangelands is largely driven by their extent, while the interest of ranchers in the United States centers on opportunities to enhance revenue streams. Rangelands cover approximately 30% of the earth's ice-free land surface and hold an equivalent amount of the world's terrestrial carbon. Rangelands are grasslands, shrublands, and savannas and cover 312 million hectares in the United States. On the arid and semi-arid sites typical of rangelands annual fluxes are small and unpredictable over time and space, varying primarily with precipitation, but also with soils and vegetation. There is broad scientific consensus that non-equilibrium ecological models better explain the dynamics of such rangelands than equilibrium models, yet current and proposed carbon sequestration policies and associated grazing management recommendations in the United States often do not incorporate this developing scientific understanding of rangeland dynamics. Carbon uptake on arid and semi-arid rangelands is most often controlled by abiotic factors not easily changed by management of grazing or vegetation. Additionality may be impossible to achieve consistently through management on rangelands near the more xeric end of a rangeland climatic gradient. This point is illustrated by a preliminary examination of efforts to develop voluntary cap and trade markets for carbon credits in the United States, and options including payment for ecosystem services or avoided conversion, and carbon taxation. A preliminary analysis focusing on cap and trade and payment for avoided conversion or ecosystem services illustrates the misalignment between policies targeting vegetation management for enhanced carbon uptake and non-equilibrium carbon dynamics on arid United States rangelands. It is possible that current proposed carbon policy as exemplified by carbon credit exchange or offsets will result in a net increase in emissions, as well as investment in failed management. Rather than focusing on annual fluxes, policy and management initiatives should seek long-term protection of rangelands and rangeland soils to conserve carbon, and a broader range of environmental and social benefits.     

Unravelling the mystery of the M31 bar

The inclination of M31 is too close to edge-on for a bar component to be easily recognized and is not sufficiently edge-on for a boxy/peanut bulge to protrude clearly out of the equatorial plane. Nevertheless, a sufficient number of clues allow us to argue that this galaxy is barred. We use fully self-consistent N -body simulations of barred galaxies and compare them with both photometric and kinematic observational data for M31. In particular, we rely on the near-infrared photometry presented in a companion paper. We compare isodensity contours to isophotal contours and the light profile along cuts parallel to the galaxy major axis and offset towards the north, or the south, to mass profiles along similar cuts on the model. All these comparisons, as well as position–velocity diagrams for the gaseous component, give us strong arguments that M31 is barred. We compare four fiducial N -body models to the data and thus set constraints on the parameters of the M31 bar, as its strength, length and orientation. Our 'best' models, although not meant to be exact models of M31, reproduce in a very satisfactory way the main relevant observations. We present arguments that M31 has both a classical and a boxy/peanut bulge. Its pseudo-ring-like structure at roughly 50 arcmin is near the outer Lindblad resonance of the bar and could thus be an outer ring, as often observed in barred galaxies. The shape of the isophotes also argues that the vertically thin part of the M31 bar extends considerably further out than its boxy bulge, that is, that the boxy bulge is only part of the bar, thus confirming predictions from orbital structure studies and from previous N -body simulations. It seems very likely that the backbone of M31's boxy bulge is families of periodic orbits, members of the x₁-tree and bifurcating from the x₁ family at its higher order vertical resonances, such as the x1v3 or x1v4 families.     

On the experimental silicification of microorganisms. III. Implications of the preservation of the green prokaryotic alga prochloron and other coccoids for interpretation of the microbial fossil record

Evidence for Precambrian fossil eukaryotic microorganisms has been based on: (1) the presence of internal ‘spots’ which have been variously interpreted to be remains of nuclei or pyrenoids of photosynthetic plastids or other organelles; (2) tetrahedral tetrad arrangement of cells; (3) trilete scars interpreted to be indicative of meiotic division: (4) large cell diameters; and (5) putative mitotic cell divisions. These features have been reported in fossils preserved in Precambrian cherts. We have studied modern microbial mats, thought to be analogues of Precambrian fossil communities, and found they may be silicified by laboratory procedures. In microbial mats from Baja California we have found many ‘spot cells’ that we could identify as remains of cyanophytes. We have silicified the newly discovered large prokaryotic coccoid green alga Prochloron and have found that it, like many cyanophytes previously silicified, preserves its structure and maintains its initial dimensions. In laboratory-silicified prokaryotic organisms we have found that all of the above criteria, supposedly characteristic of eukaryotes, can be observed. We conclude that there is no compelling morphological evidence for fossil eukaryotic microbes from Precambrian cherts.     

Mineralium Deposita Referees 1992

Mineralium Deposita Referees 1992     

Using analytic element models to delineate drinking water source protection areas

Since 1999, Ohio EPA hydrogeologists have used two analytic element models (AEMs), the proprietary software GFLOW and U.S. EPA's WhAEM, to delineate protection areas for 535 public water systems. Both models now use the GFLOW2001 solution engine, integrate well with Geographic Information System (GIS) technology, have a user-friendly graphical interface, are capable of simulating a variety of complex hydrogeologic settings, and do not rely upon a model grid. These features simplify the modeling process and enable AEMs to bridge the gap between existing simplistic delineation methods and more complex numerical models. Ohio EPA hydrogeologists demonstrated that WhAEM2000 and GFLOW2000 were capable of producing capture zones similar to more widely accepted models by applying the AEMs to eight sites that had been previously delineated using other methods. After the Ohio EPA delineated protection areas using AEMs, more simplistic delineation methods used by other states (volumetric equation and arbitrary fixed radii) were applied to the same water systems to compare the differences between various methods. GIS software and two-tailed paired t-tests were used to quantify the differences in protection areas and analyze the data. The results of this analysis demonstrate that AEMs typically produce significantly different protection areas than the most simplistic delineation methods, in terms of total area and shape. If the volumetric equation had been used instead of AEMs, Ohio would not have protected 265 km2 of critical upgradient area and would have overprotected 269 km2 of primarily downgradient land. Since an increasing number of land-use restrictions are being tied to drinking water protection areas, this analysis has broad policy implications.