Contaminant concentrations, biochemical and hematological biomarkers in blood of West Indian manatees Trichechus manatus from Brazil

The West Indian manatee Trichechus manatus is threatened with extinction in Brazil, and this study focused on nondestructive blood samples analyzed for metals, polychlorinated biphenyls (PCBs) and organochlorine pesticides (OCPs), as well as biochemical and hematological biomarkers. Studied manatees were kept at Projeto Peixe-Boi headquarters in Pernambuco State, and at two natural areas in estuaries where they are released to the wild. Manatees kept at the natural estuary in Paraiba State have blood concentrations of Al, Pb, Cd, Sn that are 11, 7, 8 and 23 times greater, respectively, than the concentrations found in blood of animals from the same species in Florida, USA. An inhibition of butyrylcholinesterase in manatees kept at the two reintroduction sites in Alagoas and Paraiba States indicated possible exposure of the animals to cholinesterase inhibitor insecticides. PCBs and OCPs were not detected. Results from this study will help delineate conservation efforts in the region.     

Modelling the long-term time series of significant wave height with non-linear threshold models

Linear autoregressive models and non-linear threshold autoregressive (TAR) models are used in the present work to describe the time series of the significant wave height of sea-states at Figueira da Foz, located in the Portuguese coast. The seasonal components of this series are identified and a TAR model with two regimes is proposed. A simulation study was carried out with the purpose of verifying if both the non-linear and linear models are suited to describe the probabilistic structure of the process. It is shown that both methods are adequate to describe the lower statistical moments of the original data, but the non-linear model represents better the skewness and the kurtosis of the data.     

Modelling tidal currents on the coast of Portugal

A tide circulation model of the Atlantic coast of the Iberian Peninsula has been constructed. This regional numerical model covers the whole continental shelf. The finite element computational grid is made of some 16,300 triangular elements with sizes ranging between 13 km (on the offshore boundary) and 1 km (near the coast), with local refinements on the continental shelf and in the area of Figueira da Foz. This site was selected as experimental site for the study of waves and currents in the frame of the MAST2/WAVEMOD research project.Boundary conditions along the three oceanic limits of this widely open domain are obtained from the North-Atlantic component of a World Ocean tidal numerical model known as FES94 [Le Provost, C., Genco, M.L., Lyard, F., Vincent, P. and Canceil, P. (1994) Spectroscopy of the world ocean tides from a finite element hydrodynamic model, Journal of Geophysical Research, Topex-Poseidon Special Issue]. A new radiation-like boundary condition has been introduced in the modelling system used (Telemac-2D), which solves the Shallow Water Equations (SWE), in order to interface the two models and to allow for the tidal wave to leave the northern limit without reflection. Model calibration has been performed on the dominating M₂ constituent. The introduction of the astral static potential generating the tide in the SWE improved this regional model.A long duration run (1 month) has been performed, the model being forced by the eight major tide constituents. Harmonic analysis of results has been performed on 17 tide constituents, due to non-linear interactions of constituents on the continental shelf. Comparisons with the FES94 model on one hand, and with a set of coastal tide gauges on the other hand, are good. A database of tidal harmonics is now available for forecasting sea levels and currents in this area.This work has shown that diurnal shelf trapped tide waves exist in some places along the Portuguese continental shelf, which induce diurnal dominant tidal currents in these places (North of Figueira da Foz).     

The structure of the benthic macrofaunal assemblages and sediments characteristics of the Paraguaçu estuarine system, NE, Brazil

The structure of the benthic macrofaunal assemblages of the estuarine portion of Paraguaçu River, NE, Brazil, and its relationship with surface sediment characteristics (trace metals, PAHs, nutrients and grain size) and physical variables were investigated at ten stations on two contrasting occasions, summer (dry season) and winter (rainy season). A total of 1258 individuals (632 in winter and 626 in summer) and 62 taxa representing polychaetes, crustaceans, bivalves, echinoderms, bryozoans, sponges, cnidarians and cephalochordates were collected. Benthic assemblages in the upper estuary were unlike those in the lower estuary and a clear substitution of benthic taxa along the estuary was observed. Macrofaunal invertebrates in the low salinity region, composed of coarse sediments, were dominated by tellinids, venerids (bivalves), cirolanids (isopods), cyclopoids (copepods), and nereidids (polychaetes). While the high salinity region, composed of fine sediments, were dominated by nuculids (bivalves), cirratulids (polychaetes), and by amphiurids (ophiuroids). The Paraguaçu estuarine system is not severely affected by anthropogenic activities. In the great majority of the study sites, concentrations of trace metals and PAHs in the sediments were near background values. Nutrients values were also low. We formulated new models of taxon distribution and suggested detailed studies on the effects of salinity variation and studies using functional approaches to better understand the processes causing the spatial patterns in tropical estuarine benthic assemblages.     

Trophic relationships in tidepool fish assemblages of the tropical Southwestern Atlantic

Trophic studies are fundamental to understanding the dynamics of assemblages and functional roles of species within ecosystems, contributing to the identification of factors responsible for the organization and structure of communities. This study aimed to analyse the trophic organization of tidepool fish assemblages in the tropical Southwestern Atlantic, based on the underlying idea that food resources are not limiting and that trophic guild formation is not driven by food competition. Diets were based on feeding index values of food categories for 12 representative species collected in six tidepools (20º49′ S, 40º36′ W) at quarterly intervals (2005 to 2007). The main food categories were small crustaceans, polychaetes and macroalgae. Multivariate techniques evidenced two multispecific trophic guilds: small‐prey carnivores, including Bathygobius soporator, Bathygobius geminatus, Malacoctenus delalandii and Halichoeres poeyi, and herbivores, including Sparisoma axillare and Acanthurus bahianus. Other species presented significantly different diets and were classified into the following guilds: omnivores feeding on filamentous algae and copepods (Abudefduf saxatilis); large‐prey carnivores (Labrisomus nuchipinnis); omnivores feeding on polychaetes and filamentous algae (Stegastes fuscus); and polychaete feeders (Ahlia egmontis). Gymnothorax funebris and Gymnothorax moringa were classified as carcinophagores and piscivores, respectively. Trophic organization appears related to species convergence toward the use of abundant food resources, driven by a combination of factors allowing some resource partitioning through inter‐specific differences in consumer size, microhabitat, behavior, and trophic specialization.     

Origin of the color in cobalt-doped quartz

Synthetic Co-doped quartz was grown hydrothermally in steel autoclaves at the Technological Center of Minas Gerais (CETEC), Brazil. The quartz samples, originally yellow in the as-grown state acquired blue coloration after prolonged heat treatment times at 500°C near the alpha–beta transition temperature. UV–VIS–NIR absorption spectroscopy shows the characteristic spectra of Co³⁺ before heat treatment. After heat treatment, the optical absorption spectrum is dominated by two split-triplet bands the first in the near infrared region centered at about 6,700 cm⁻¹ (1,490 nm) and the second in the visible spectral range at about 16,900 cm⁻¹ (590 nm). Both split-triplet bands are typical for Co²⁺ ions in tetrahedral coordination environments. From the absence of electron paramagnetic resonance (EPR) spectra, we conclude that the Co²⁺ found in the optical absorption spectra of the blue quartz is not due to an isolated structural site in the quartz lattice. Instead, the blue color is associated with electronic transitions of Co²⁺ in small inclusions in which the Co site has tetrahedral symmetry. The non-observation of polarization-depend optical absorption spectra is also in agreement with this model. The results for Co²⁺ in quartz are different from Co-bearing spinel and staurolite and other silicates like orthopyroxene, olivine, and beryls. The formation process of the color center is discussed.     

Late Neogene sequence stratigraphic evolution of the Foz do Amazonas Basin,Brazil

The margin of the Foz do Amazonas Basin saw a shift from predominantly carbonate to siliciclastic sedimentation in the early late Miocene. By this time, the Amazon shelf had also been incised by a canyon that allowed direct influx of sediment to the basin floor, thus confirming that the palaeo‐Amazon fan had already initiated by that time (9.5–8.3 Ma). Above this interval, during a prolonged lowstand, Messinian third‐order sequences are preserved only in the incised‐valley fills of the canyon with no equivalent strata on the shelf. Third‐ and fourth‐order sequences younger than Messinian are preserved on the shelf after sea‐level rise above the shelf by the early Pliocene. Sequences younger than 3.8 Ma often show fourth‐order cyclicity with an average duration of 400 ka (larger scale eccentricity cycles) often preserved in high‐sedimentation‐rate areas of river deltas. Mass wasting and transportation of slope sediments to the basin began to play an important role in sediment dispersal at least as far back as the mid‐Pliocene, after rapid progradation had produced steeper slopes more prone to failure.