Stochastic Local Interaction Model: An Alternative to Kriging for Massive Datasets

Mathematical Geosciences - Classical geostatistical methods face serious computational challenges if they are confronted with large spatial datasets. The stochastic local interaction (SLI) approach...     

Microbial photosynthesis in coral reef sediments (Heron Reef, Australia)

We investigated microphytobenthic photosynthesis at four stations in the coral reef sediments at Heron Reef, Australia. The microphytobenthos was dominated by diatoms, dinoflagellates and cyanobacteria, as indicated by biomarker pigment analysis. Conspicuous algae firmly attached to the sand grains (ca. 100 μm in diameter, surrounded by a hard transparent wall) were rich in peridinin, a marker pigment for dinoflagellates, but also showed a high diversity based on cyanobacterial 16S rDNA gene sequence analysis. Specimens of these algae that were buried below the photic zone exhibited an unexpected stimulation of respiration by light, resulting in an increase of local oxygen concentrations upon darkening. Net photosynthesis of the sediments varied between 1.9 and 8.5 mmol O₂ m⁻² h⁻¹ and was strongly correlated with Chl a content, which lay between 31 and 84 mg m⁻². An estimate based on our spatially limited dataset indicates that the microphytobenthic production for the entire reef is in the order of magnitude of the production estimated for corals. Photosynthesis stimulated calcification at all investigated sites (0.2–1.0 mmol Ca²⁺ m⁻² h⁻¹). The sediments of at least three stations were net calcifying. Sedimentary N₂-fixation rates (measured by acetylene reduction assays at two sites) ranged between 0.9 to 3.9 mmol N₂ m⁻² h⁻¹ and were highest in the light, indicating the importance of heterocystous cyanobacteria. In coral fingers no N₂-fixation was measurable, which stresses the importance of the sediment compartment for reef nitrogen cycling.     

Climate change and coral reef bleaching: An ecological assessment of long-term impacts,recovery trends and future outlook

Since the early 1980s, episodes of coral reef bleaching and mortality, due primarily to climate-induced ocean warming, have occurred almost annually in one or more of the world's tropical or subtropical seas. Bleaching is episodic, with the most severe events typically accompanying coupled ocean–atmosphere phenomena, such as the El Niño-Southern Oscillation (ENSO), which result in sustained regional elevations of ocean temperature. Using this extended dataset (25+ years), we review the short- and long-term ecological impacts of coral bleaching on reef ecosystems, and quantitatively synthesize recovery data worldwide. Bleaching episodes have resulted in catastrophic loss of coral cover in some locations, and have changed coral community structure in many others, with a potentially critical influence on the maintenance of biodiversity in the marine tropics. Bleaching has also set the stage for other declines in reef health, such as increases in coral diseases, the breakdown of reef framework by bioeroders, and the loss of critical habitat for associated reef fishes and other biota. Secondary ecological effects, such as the concentration of predators on remnant surviving coral populations, have also accelerated the pace of decline in some areas. Although bleaching severity and recovery have been variable across all spatial scales, some reefs have experienced relatively rapid recovery from severe bleaching impacts. There has been a significant overall recovery of coral cover in the Indian Ocean, where many reefs were devastated by a single large bleaching event in 1998. In contrast, coral cover on western Atlantic reefs has generally continued to decline in response to multiple smaller bleaching events and a diverse set of chronic secondary stressors. No clear trends are apparent in the eastern Pacific, the central-southern-western Pacific or the Arabian Gulf, where some reefs are recovering and others are not. The majority of survivors and new recruits on regenerating and recovering coral reefs have originated from broadcast spawning taxa with a potential for asexual growth, relatively long distance dispersal, successful settlement, rapid growth and a capacity for framework construction. Whether or not affected reefs can continue to function as before will depend on: (1) how much coral cover is lost, and which species are locally extirpated; (2) the ability of remnant and recovering coral communities to adapt or acclimatize to higher temperatures and other climatic factors such as reductions in aragonite saturation state; (3) the changing balance between reef accumulation and bioerosion; and (4) our ability to maintain ecosystem resilience by restoring healthy levels of herbivory, macroalgal cover, and coral recruitment. Bleaching disturbances are likely to become a chronic stress in many reef areas in the coming decades, and coral communities, if they cannot recover quickly enough, are likely to be reduced to their most hardy or adaptable constituents. Some degraded reefs may already be approaching this ecological asymptote, although to date there have not been any global extinctions of individual coral species as a result of bleaching events. Since human populations inhabiting tropical coastal areas derive great value from coral reefs, the degradation of these ecosystems as a result of coral bleaching and its associated impacts is of considerable societal, as well as biological concern. Coral reef conservation strategies now recognize climate change as a principal threat, and are engaged in efforts to allocate conservation activity according to geographic-, taxonomic-, and habitat-specific priorities to maximize coral reef survival. Efforts to forecast and monitor bleaching, involving both remote sensed observations and coupled ocean–atmosphere climate models, are also underway. In addition to these efforts, attempts to minimize and mitigate bleaching impacts on reefs are immediately required. If significant reductions in greenhouse gas emissions can be achieved within the next two to three decades, maximizing coral survivorship during this time may be critical to ensuring healthy reefs can recover in the long term.     

The oxygen isotope composition of water masses within the North Sea

Based on measurements of the ¹⁸O isotope composition of 247 samples collected over a 3-year period we have assessed the oxygen isotope composition of water masses in the North Sea. This is the first δ¹⁸O data set that covers the entire North Sea basin. The waters lie on a mixing line: δ¹⁸O (‰_VSMOW) = −9.300 + 0.274(S) with North Atlantic sub-polar mode water (SPMW) and surface waters, and Baltic Sea water representing the saline and freshwater end members respectively. Patterns exhibited in surface and bottom water δ¹⁸O distributions are representative of the general circulation of the North Sea. Oxygen-18 enriched waters from the North Atlantic enter the North Sea between Scotland and Norway and to a lesser extent through the English Channel. In contrast, oxygen-18 depleted waters mainly inflow from the Baltic Sea, the rivers Rhine and Elbe, and to a lesser degree, the Norwegian Fjords and other river sources. Locally the δ¹⁸O–salinity relationship will be controlled by the isotopic composition of the freshwater inputs. However, the range of local freshwater compositions around the North Sea basin is too narrow to characterise the relative contributions of individual sources to the overall seawater composition. This dataset provides important information for a number of related disciplines including biogeochemical research and oceanographic studies.     

Managing by principle: A critical analysis of the European principles of Integrated Coastal Zone Management (ICZM)

A set of eight principles is contained in the European Recommendation on Integrated Coastal Zone Management. The principles have been adopted with the minimum of critical review. The six core principles form two groups, one concerned with strategic goals and one that has a local focus. The principles are presented as a menu of free-standing options, with no prioritization either within or between groups. This can produce irreconcilable differences in strategy. The principles require clarification, prioritization of the strategic principles and recognition that they are an indivisible integrated set which should not be used to select principles to advance a particular agenda.     

Predicting suitable habitat for the cold-water coral Lophelia pertusa (Scleractinia)

Ecological-niche factor analysis (ENFA) was applied to the reef framework-forming cold-water coral Lophelia pertusa. The environmental tolerances of this species were assessed using readily available oceanographic data, including physical, chemical, and biological variables. L. pertusa was found at mean depths of 468 and 480 m on the regional and global scales and occupied a niche that included higher than average current speed and productivity, supporting the theory that their limited food supply is locally enhanced by currents. Most records occurred in areas with a salinity of 35, mean temperatures of 6.2–6.7  °C and dissolved oxygen levels of 6.0–6.2 ml l⁻¹. The majority of records were found in areas that were saturated with aragonite but had low concentration of nutrients (silicate, phosphate, and nitrate). Suitable habitat for L. pertusa was predicted using ENFA on a global and a regional scale that incorporated the north-east Atlantic Ocean. Regional prediction was reliable due to numerous presence points throughout the area, whereas global prediction was less reliable due to the paucity of presence data outside of the north-east Atlantic. However, the species niche was supported at each spatial scale. Predicted maps at the global scale reinforced the general consensus that the North Atlantic Ocean is a key region in the worldwide distribution of L. pertusa. Predictive modelling is an approach that can be applied to cold-water coral species to locate areas of suitable habitat for further study. It may also prove a useful tool to assist spatial planning of offshore marine protected areas. However, issues with eco-geographical datasets, including their coarse resolution and limited geographical coverage, currently restrict the scope of this approach.     

The Natural Resource Management Planning Portal: Perspectives for NRM Planning and Reporting

Natural Resource Management (NRM) is often conducted as a partnership between government and citizens. In Australia, government agencies formulate policy and fund implementation that may be delivered on-ground by community groups (such as Landcare). Since the late 1980s, over AUS$8b of Commonwealth investment has been made in NRM. However, quantitative evidence of environmental improvements is lacking. The NRM Planning Portal has been developed to (1) provide an online spatial information system for sharing Landcare and agency data; and (2) to facilitate NRM priority setting at local and regional planning scales. While the project successfully federates Landcare NRM activity data, challenges included (1) unstructured, non-standardized data, meaning that quantitative reporting against strategic objectives is not currently possible, and (2) a lack of common understanding about the value proposition for adopting the portal approach. Demonstrating the benefit of technology adoption is a key lesson for digital NRM planning.     

Same space – different perspectives: comparative analysis of geographic context through sketch maps and spatial video geonarratives

ABSTRACT

The importance of including a contextual underpinning to the spatial analysis of social data is gaining traction in the spatial science community. The challenge, though, is how to capture these data in a rigorous manner that is translational. One method that has shown promise in achieving this aim is the spatial video geonarrative (SVG), and in this paper we pose questions that advance the science of geonarratives through a case study of criminal ex-offenders. Eleven ex-offenders provided sketch maps and SVGs identifying high-crime areas of their community. Wordmapper software was used to map and classify the SVG content; its spatial filter extension was used for hot spot mapping with statistical significance tested using Monte Carlo simulations. Then, each subject’s sketch map and SVG were compared. Results reveal that SVGs consistently produce finer spatial-scale data and more locations of relevance than the sketch maps. SVGs also provide explanation of spatial-temporal processes and causal mechanisms linked to specific places, which are not evident in the sketch maps. SVG can be a rigorous translational method for collecting data on the geographic context of many phenomena. Therefore, this paper makes an important advance in understanding how environmentally immersive methods contribute to the understanding of geographic context.     

Clam community composition and prey shell size impacts moon snail (Gastropod: Naticidae) drilling frequencies in South Carolina,USA

Moon snail predation on clams is a common model system of predator–prey interactions. In this system, the predator bores through the shell of its prey, leaving a distinct and identifiable hole. Some paleoecological and behavioral research on moon snails suggests a trend in predation preference directed toward clams with small shells. Rarely, however, have studies tested relative drilling frequencies across species and size ranges in natural assemblages of clam communities. We examined the clam community composition at two beaches in South Carolina, USA, and we then tested moon snail predator preferences for (a) clam prey species and (b) whether their selection is related to prey shell size. We collected a total of 1,879 clam shells, identified each shell to species and recorded their anteroposterior length. The species composition of clams differed significantly between the two beaches; Anadara ovalis was dominant at both sites, but three of ten total species were only collected at one beach. Folly Beach had nearly a 60% higher the overall drilling frequency (34.6%) versus Edisto Beach (21.8%), and this may be linked to the differences in clam community compositions at the sites. For A. ovalis and Mulinia lateralis, shells with larger lengths have lower probabilities of being bored by a moon snail. Anadara brasiliana, which generally is a thinner‐shelled clam species, had the highest total drilling frequency (77.2%), and Noetia ponderosa, a thicker‐shelled clam, had a considerably lower drilling frequency (12.0%). We conclude that both community level factors (species composition) and population characteristics (shell size distributions) may influence the local drilling frequency by moon snails.