Designing science web sites

From a scientist’s viewpoint a web site is one tool used to conduct research. From an artist’s viewpoint web sites are a form of visual composition. From a developer’s point of view a web site is a type of application. While web sites are a relatively new medium with a particular set of constraints, they do adhere to the same basic design principles that apply to other art forms. These design principles are the basic assumptions that affect the arrangement of elements within a composition. A successful design uses the principles and elements to achieve a visual goal in the composition. A web site designed for scientists has unique properties which are not shared by many other types of web sites. These properties influence the overall visual design of the web sites. Recently at the Institute of Geophysics and Planetary Physics at UCLA undertook a re-design of a number of its websites. In the effort, the use of visual design principles combined with the properties of a science web site were put to the test. In all, six different web sites were designed each with a difference science focus. We describe the process used to design the web sites which involve forming teams of designers, scientists and developers. We present example pages from each design and conclude with a discussion of what was learned during the process.     

Fast data assimilation using a nonlinear Kalman filter and a model surrogate: An application to the Columbia River estuary

A fast and adjoint-free nonlinear data assimilation (DA) system was developed to simulate 3D baroclinic circulation in estuaries, leveraging two recently developed technologies: (1) a nonlinear model surrogate that executes forward simulation three orders of magnitude faster than a forward numerical circulation code and (2) a nonlinear extension to the reduced-dimension Kalman filter that estimates the state of the model surrogate. The noise sources in the Kalman filter were calibrated using empirical cross-validation and accounted for errors in model and model forcing.The DA system was applied to assimilate in situ measurements of water levels, salinities, and temperatures in simulations of the Columbia River estuary. To validate the DA results, we used a combination of cross-validation studies, process-oriented studies, and tests of statistical and dynamical consistency. The validation studies showed that DA improved the representation of several important processes in the estuary, including nonlinear tidal propagation, salinity intrusion, estuarine residual circulation, heat balance, and response of the estuary to coastal winds.     

Limited fluid-rock interaction at marble-gneiss contacts during Cretaceous granulite-facies metamorphism,Seward Peninsula,Alaska

Stable-isotope profiles show that flat-lying marble units acted as impermeable barriers to upward fluid flow in transitional amphibolite-granulite grade rocks of the Kigluaik Mountains, Seward Peninsula, Alaska. The degree of permeability is related to the composition of the marble. The margin of a thick pure dolomite marble chemically reacted with underlying metasyenite (aH₂O=0.2) to form a 2 cm boundary layer of calcite + forsterite by introduction of SiO₂. No fluid penetrated past this reaction front, although the high temperature of metamorphism (800°C) allowed transport of carbon and oxygen isotopes for an additional 2 cm by diffusion through the solid dolomite. A second marble with a higher silica content underwent more decarbonation, which enhanced porosity and lead to a greater extent of isotope transport (2–3 m) in contact with quartzo-feld-spathic gneiss below. An estimate of total fluid flux across the bottom of this marble layer based on the shape of the isotope profile is 1 cm³/cm² directed down, out of the marble. At two other marble-gneiss contacts steep isotopic gradients coincide with lithologic contacts, indicating very little cross-lithology fluid flow. The extent of diffusional transport of isotopes in the marbles is limited and interpreted as indicating the transient presence of a pore fluid, generated by thermally driven devolatilization reactions. No wholesale pervasive advection of C-O-H fluid occurred across the thick, continuous, marble units near the exposed base of the Kigluaik Group section during the entire regional metamorphic cycle. Activities of pore-fluid species were controlled by internal processes. Movement of volatiles and stable-isotopes between contrasting rock-types was dominantly diffusive. Channelized fluid pathways through the marble units developed during uplift and cooling but were not present during peak metamorphism. Heating of the section occurred by conduction, probably from an underlying magma source, and not by advection of a C-O-H fluid.