Twenty years of progresses in oceanic rogue waves: the role played by weakly nonlinear models

Here we discuss some of the progresses that have been made in the last 20 years in the field of oceanic rogue waves, focusing on the role played by leading order equations such as the nonlinear Schrödinger and the Korteweg-De Vries equations. For such equations, it is possible, as shown in Onorato et al. (Origin of heavy tail statistics in equations of the nonlinear Schrödinger type: an exact result, 2016. arXiv:1601.04317), to derive a very simple relation in which the variation of the third (for the KdV) and fourth (for the NLS) moment of the probability density function of the wave field can be related to the variation of the spectral bandwidth. These relations give some new perspectives on the formation of rogue waves in a random sea state.     

Spatial distribution of crustaceans associated with shallow soft‐bottom habitats in a coral reef lagoon

The ecology and diversity of the shallow soft‐bottom areas adjacent to coral reefs are still poorly known. To date, the few studies conducted in these habitats dealing with macroinvertebrate fauna have focused on their abundance spatial patterns at high taxonomic levels. Thus, some aspects important to evaluate the importance and vulnerability of these habitats, such as species diversity or the degree of habitat specialization, have often been overlooked. In this study we compared the crustacean assemblages present in four different habitats at Magoodhoo Island coral reef lagoon (Maldives): coral rubble, sandy areas and two different seagrass species (Thalassia hemprichii and Cymodocea sp.). Forty‐two different crustacean species belonging to 30 families and four orders were found. ‘Site’ was a significant factor in all of the statistical analyses, indicating that tropical soft‐bottom habitats can be highly heterogeneous, even at a spatial scale between tens and hundreds of meters. Although traditionally it has been considered that seagrass beds host greater species diversity and abundance of organisms than adjacent unvegetated habitats, no differences in the univariate measures of fauna (abundance of organisms, number of species and Shannon diversity) were observed among habitats. However, sandy areas, coral rubble and seagrass beds exhibited different species composition of crustacean communities. The percentage of taxa considered as potential habitat specialists was 27% and the number of species exclusively occurring in one habitat was especially high in seagrass beds. Thus, degradation of this vegetated habitat would result in a great loss of biodiversity in tropical shallow soft‐bottom habitats.     

Hydrographic Vertical Separation Surfaces (HyVSEPs) for the Tidal Waters of Canada

Since the advent of Global Navigation Satellite Systems, it has been possible to perform hydrographic survey reductions through the ellipsoid, which has the potential to simplify operations and improve bathymetric products. This technique requires a spatially continuous separation surface connecting chart datum (CD) to a geodetic ellipsoid. The Canadian Hydrographic Service (CHS), with support from the Canadian Geodetic Survey, has developed a new suite of such surfaces, termed Hydrographic Vertical Separations Surfaces, or HyVSEPs, for CD and seven tidal levels. They capture the spatial variability of the tidal datum and levels between tide gauges and offshore using semiempirical models coupling observations at tide stations with relative sea-level rise estimates, dynamic ocean model solutions, satellite altimetry, and a geoid model. HyVSEPs are available for all tidal waters of Canada, covering over seven million square kilometers of ocean and more than 200,000 kilometers of shoreline. This document provides an overview of the CHS's modeling approach, tools, methods, and procedures.

The HyVSEP for CD defines the new hydrographic datum for the tidal waters of Canada. HyVSEPs for other tidal levels are fundamental for coastal studies, climate change adaptation and the definition of the Canadian shoreline and offshore boundaries. HyVSEPs for inland waters are not discussed.     

Crustacean decapod assemblages associated with fragmented Posidonia oceanica meadows in the Alboran Sea (Western Mediterranean Sea): composition,temporal dynamics and influence of meadow structure

The decapod assemblage associated with a Posidonia oceanica meadow located near its western limit of biogeographic distribution was studied over an annual cycle. Fauna samples were taken seasonally over a year (five replicates per season) in two sites located 7 km apart, using a non‐destructive sampling method (airlift sampler) for the seagrass. The dominant species of the assemblage, Pisidia longimana, Pilumnus hirtellus and Athanas nitescens, were associated with the protective rhizome stratum, which is mainly used as a nursery. The correlations between decapod assemblage structure and some phenological parameters of the seagrass shoots and wave height were negative or null, which reflects that species associated with the rhizome had a higher importance than those associated with the leaf stratum. The abundance and composition of the decapod assemblage as well as the ecological indexes displayed a seasonality trend with maximum values in summer‐autumn and minimum in winter‐spring, which were related to the seawater temperature and the recruitment periods of the dominant species. The spatial differences found in the structure and dynamics of the assemblages may be due to variations in the recruitment of the dominant species, probably as a result of the influence of local factors (e.g. temperature, currents) and the high dispersal ability of decapods, together with the patchy configuration and the surrounding habitats. The studied meadows are fragmented and are integrated within a mosaic of habitats (Cymodocea nodosa patches, algal meadows, rocky and sandy bottoms), which promotes the movement of individuals and species among them, maintaining a high species richness and evenness.     

Population genetic diversity and structure of a dominant tropical seagrass,Cymodocea rotundata,in the Western Pacific region

Cymodocea rotundata is an ecologically important tropical pioneer seagrass species distributed in the Indo‐Pacific region. The population genetic diversity and structure of this species were analysed at 46 sites spanning the Philippines, Ryukyu Islands (northern limit) and Hainan Island, by using microsatellite simple sequence repeat (SSR) markers. Analyses revealed the persistence of C. rotundata likely relies on local population dynamics and fitness influenced by environmental gradients, with sexual reproduction prevalent in the Philippines while the Ryukyu and Hainan populations were predominantly established by clonal spread. Analysis of molecular variance showed significant genetic differentiation (P < 0.001) among three geographic regions: the Philippines, Ryukyu and Hainan. Furthermore, the mean fixation index value was very high (F_ST = 0.36), indicating poor dispersal potential or limited gene flow. Allelic richness and heterozygosity of C. rotundata was comparable in the Philippines and Ryukyu Islands populations. More private alleles were found in the Philippines and excess heterozygotes in the Ryukyu Islands. STRUCTURE analysis revealed that the Ryukyu and Hainan populations were mosaics of admixed alleles of individuals from the Philippines. An assignment test suggested that recruitment occurs from the Northeast Philippines to Ryukyu Islands. These results suggest that the Philippine populations are tropical seagrass hotspots and perhaps the origin of the populations in the Ryukyu and Hainan Islands. This scenario is most likely driven by the Kuroshio Current and island integration events during plate tectonic activities. The Philippine Archipelago is considered of high importance for conservation objectives and management plan of seagrasses. Likewise, the Ryukyu Islands are also important in terms of conserving regional diversity because locally adapted genotypes have important evolutionary potential in the face of environmental change.