Total Lipid and Fatty Acid Classes in Decomposing Mangrove Leaves of <Emphasis Type="Italic">Bruguiera gymnorrhiza</Emphasis> and <Emphasis Type="Italic">Kandelia candel</Emphasis>: Significance with respect to Lipid Input

Changes in the concentration of total lipid and fatty acids (FAs) during the decomposition of mangrove leaves were investigated by field experiments using yellow leaves of Bruguiera gymnorrhiza (L.) Lamk. and Kandelia candel (L.) Druce, in order to quantify mangrove contribution to lipid and fatty acid inputs to marine sediments. Total lipid and total FA in the fresh (green and yellow) and decomposing leaves of both species were significantly higher during winter than summer. During decomposition, total lipid content and FA concentration, in particular branched chain fatty acids (BrFAs) and bacterial fatty acids (BFAs), increased to a maximum concentration in 45 days during winter and in 17 days during summer. Lipids were lost faster in K. candel leaf detritus than in B. gymnorrhiza leaf detritus in which >90% of the total lipid original weight was lost during the summer experiment and <60% during the winter experiment. The changes in the concentrations of total lipids and FAs in the decomposing leaves also indicate that mangrove leaves are significant sources of fatty acids and probably other lipid compounds to estuarine ecosystems and that tidal waters transport the lipids and FAs adsorbed to particulate matter from mangroves to adjacent estuarine sediments and the ocean.     

Simulation of green water flow on deck using non-linear dam breaking theory

Experiments carried out with models of floating production, storage and offloading platforms (FPSOs) showed that the flow of water over the deck edge, onto the deck resembled a suddenly released wall of water rather than a breaking wave. Therefore green water flow onto the deck was simulated using dam breaking theory, but the theory’s shallow-water assumptions may be limiting. In this paper a non-linear dam breaking problem is formulated. Equations of motion in the Lagrangian form are used and the solution is sought as an infinite series in time. Comparisons with the shallow water approximation are carried out.     

A nitrate and silicate budget in the equatorial Pacific Ocean: a coupled physical–biological model study

A coupled physical–biological model was developed to simulate the low-silicate, high-nitrate, and low-chlorophyll (LSHNLC) conditions in the equatorial Pacific Ocean and used to compute a detailed budget in the Wyrtki box (5°N–5°S, 180–90°W) for the major sources and cycling of nitrogen and silicon in the equatorial Pacific. With the incorporation of biogenic silicon dissolution, NH₄ regeneration from organic nitrogen and nitrification of ammonia in the model, we show that silicon recycling in the upper ocean is less efficient than nitrogen. As the major source of nutrients to the equatorial Pacific, the Equatorial Undercurrent provides slightly less Si(OH)₄ than NO₃ to the upwelling zone, which is defined as 2.5°N–2.5°S. As a result, the equatorial upwelling supplies less Si(OH)₄ than NO₃ into the euphotic zone in the Wyrtki box, having a Si/N supply ratio of about 0.85 (2.5 vs. 2.96 mmolm⁻² day⁻¹). More Si(OH)₄ than NO₃ is taken up with a Si/N ratio of 1.17 (2.72 vs. 2.33 mmolm⁻² day⁻¹) within the euphotic zone. The difference between upwelling supply and biological uptake is balanced by nutrient regeneration and horizontal advection. Excluding regeneration, the net silicate and nitrate uptakes are nearly equal (1.76 vs. 1.84 mmolm⁻² day⁻¹). However, biogenic silica export production is slightly higher than organic nitrogen (1.74 vs. 1.59 mmolm⁻² day⁻¹) following a 1.1 Si/N ratio. In the central equatorial Pacific, low silicate concentrations limit diatom growth; therefore non-diatom new production accounts for most of the new production. Higher silicate supply in the east maintains elevated diatom growth rates and new production associated with diatoms dominate upwelling zone. In contrast, the new production associated with small phytoplankton is nearly constant or decreases eastward along the equator. The total new production has a higher rate in the east than in the west, following the pattern of surface silicate. This suggests that silicate regulates the diatom production, total new production, and thereby carbon cycle in this area. The modeled mean primary production is 48.4 mmolCm⁻² day⁻¹, representing the lower end of direct field measurements, while new production is 15.0 mmolCm⁻² day⁻¹, which compares well with previous estimates.     

Modeling bed-load transport of coarse sediments in the Great Bay Estuary, New Hampshire

Current, sea level and bed-load transport are investigated in the Lower Piscataqua River section of the Great Bay Estuary, New Hampshire, USA—a well-mixed and geometrically complex system with low freshwater input, having main channel tidal currents ranging between 0.5 and 2 m s⁻¹. Current and sea level forced by the M₂M₄M₆ tides at the estuarine mouth are simulated by a vertically averaged, non-linear, time-stepping finite element model. The hydrodynamic model uses a fixed boundary computational domain and accounts for flooding–drying of tidal flats by making use of a groundwater component. Inertia terms are neglected in comparison with pressure gradient and bottom friction terms, which is consistent with the observed principal dynamic balance for this section of the system. The accuracy of hydrodynamic predictions in the study area is demonstrated by comparison with four tidal elevation stations and two cross-section averaged current measurements. Simulated current is then used to model bed-load transport in the vicinity of a rapidly growing shoal located in the main channel of the lower system. Consisting of coarse sand and gravel, the shoal must be dredged every five to eight years. Two approaches are taken—an Eulerian parametric method in which nodal bed-load flux vectors are averaged over the tidal cycle and a Lagrangian particle tracking approach in which a finite number of sediment particles are released and tracked. Both methods yield pathways and accumulations in agreement with the observed shoal formation and the long-term rate of sediment accumulation in the shoal area.     

Thermal structures in the Kuroshio extension measured with a towed thermistor chain

Two-dimensional temperature data observed by use of a 275 meter towed thermistor chain deployed from an oceanographic research vessel USS MARYSVILLE, which cruised with a speed of 6.2 knots in July 1966 across the Kuroshio Extension in the North Pacific, are investigated. Two-dimensional variations of the distribution of the isotherms along the ship's track are analyzed with special reference to their slope, wavelength and wave height. The results show that the slope and wave height of isotherms have a tendency to increase as the temperature decreases. Even if the contribution of wave heights smaller than 1.5 m is neglected, i.e., contribution of large scale slope with a horizontal scale of 5–30 km is subtracted, this tendency is still detected. In contrast to this, the wavelength evaluated by the crest to crest method has no dependency on the temperature. Power spectrum of the isotherm depth is proportional tok ^–1.87 for 13°C andk ^–2.13 for 27°C, wherek is the wave number. It is shown that the spectra of warmer isotherms are relatively well approximated by –2 power law (Garrett and Munk spectrum) for internal waves rather than the –5/3 power law (Kolmogorov spectrum) for three dimensional isotropic turbulence.     

Particulate flux in the water column overlying Santa Monica Basin

Fluxes of particulate carbon, nitrogen, phytoplankton pigments, biogenic silica and dry mass were measured using free-floating and moored sediment trap arrays in the Santa Monica Basin during the period from October 1985 to August 1990 as part of the California Basin Study (CaBS) Program. In field testing for potential sources of sediment trap biases, we found little significant or consistent difference in rate estimates between short-term drifting traps and long-term moored traps, between preserved and unpreserved traps in short-term experiments, between different preservatives (mercury or formalin) in long-term experiments, between different designs of small cylindrical traps, and between deep-moored cylindrical traps and large conical traps. We did, however, find that sediment trap samples collected and analyzed on 0.45 μm silver filters gave estimates of carbon and nitrogen fluxes about 25% higher than samples collected on GF/F glass-fiber filters. Concurrent trap deployments at two stations 18km apart revealed low mesoscale variability in flux estimates. Seasonal patterns in carbon and nitrogen flux were not evident in our data, but strong seasonality, with spring maxima and summer minima, were observed for fluxes of phaeopigments and biogenic silica out of the euphotic zone.Time-averaged rates of particulate flux for long-term trap deployments from January to August 1990, were 121, 18.8, 1.5, 67 and 633mg m⁻²d⁻¹ at 110–135m for carbon, nitrogen, phaeopigment, biogenic silica and mass, respectively. Flux estimates to the basin floor (835–860m) were 50, 6.5, 0.64, 41.6 and 575mg m⁻²d⁻¹ for the same parameters. The former estimates are constrained by and in good agreement with independent assessments of new production from nitrate uptake in the euphotic zone. The latter agree with rates previously inferred from the sedimentary record using ²¹⁰Pb as a tracer. In addition, the difference in carbon estimates in the water column between the euphotic zone and the basin floor is consistent with the requirements for bacterial growth and metabolism at intermediate depths as measured by the thymidine method.     

Threshold of motion of coarse-grained sediment under waves in shallow water

This paper considers the threshold of motion of sediment in shallow coastal waters under breaking and non-breaking waves. A simple model, representing conditions at the fluid/sediment interface, is developed. The representation of a breaking wave is based on bore theory, and the shear stress at the bed is based on the friction formula of O'Connor and Yoo. A threshold formula is presented based on the use of energy dissipation. The threshold data is also related to the Shields threshold criterion.