Seasonal influence and local factors affecting macroinvertebrate structure in a high-altitude Andean stream

Small water bodies are critical for maintaining freshwater biodiversity, but are among the least investigated aquatic environments. We examined physical and chemical variables at two reaches in Arroyo Tambillos, a small, high-elevation Andean stream, in NW Mendoza province, Argentina,across four seasons to examine how local factors and seasonality affected the structure of the macroinvertebrate community. The Arroyo Tambillos community was numerically dominated by ephemeropterans(mainly Massartellopsis irarrazavali) while the dipteran Chironomidae were the most species rich. Total macroinvertebrate abundance was highest in summer, driven mainly by taxa that were secondary in dominance(Austrelmis sp. and Andesiops peruvianus), while richness did not differ between seasons. However, benthic composition was different in Fall 2013(March)compared to other seasons, largely because of the increased abundance of Chironomidae. Canonical correspondence analysis discriminated Chironomidae species distributions in Fall 2013 by substrate type(i.e., big and small boulder substrate). By contrast,discharge, velocity, and depth were the variables which most affected the macroinvertebrate abundance and distributions. Contrary to our expectations, most community changes observed occurred in fall instead of summer. Nivo-kryal stream communities like the one described here have become increasingly important for conserving mountain stream biodiversity as anthropogentic impacts and climate change increasingly impact lower stream reaches. Therefore, monitoring high-altitude streams like the Arroyo Tambillos may be critical for preventing the future loss of unique and sensitive stream biota.     

Contrasting patterns of free-living bacterioplankton diversity in macrophyte-dominated versus phytoplankton blooming regimes in Dianchi Lake,a shallow lake in China

Freshwater shallow lakes typically exhibit two alternative stable states under certain nutrient loadings:macrophyte-dominated and phytoplankton-dominated water regimes.An ecosystem regime shift from macrophytes to phytoplankton blooming typically reduces the number of species of invertebrates and fishes and results in the homogenization of communities in freshwater lakes.We investigated how microbial biodiversity has responded to a shift of the ecosystem regime in Dianchi Lake,which was previously fully covered with submerged macrophytes but currently harbors both ecological states.We observed marked divergence in the diversity and community composition of bacterioplankton between the two regimes.Although species richness,estimated as the number of operational taxonomic units and phylogenetic diversity(PD),was higher in the phytoplankton dominated ecosystem after this shift,the dissimilarity of bacterioplankton community across space decreased.This decrease in beta diversity was accompanied by loss of planktonic bacteria unique to the macrophyte-dominated ecosystem.Mantel tests between bacterioplankton community distances and Euclidian distance of environmental parameters indicated that this reduced bacterial community differentiation primarily reflected the loss of environmental niches,particularly in the macrophyte regime.The loss of this small-scale heterogeneity in bacterial communities should be considered when assessing long-term biodiversity changes in response to ecosystem regime conversions in freshwater lakes.     

A Comparative Study of Fish Assemblages Near Aquaculture,Artificial and Natural Habitats

Habitat plays a critical role in regulating fish community structure. Using the data collected from a monthly trammel net survey in Ma’an archipelago off the east coast of China, we evaluated impacts of five different habitats(artificial reefs, mussel farms, cage aquaculture, rocky reefs and soft bottom) on fish assemblages. This study suggests that artificial reefs(AR) have significantly higher species richness, abundance and diversity than mussel farms(MF) or soft bottom(SB) habitats during most seasons, and that fish taxa in the AR habitats are similar to those in the rocky reef(RR) habitats. Two different fish assemblage patterns were revealed in the study area using non-metric multidimensional scaling ordination: an assemblage dominated by reef fishes(especially by Scorpaenidae species) in AR, RR and cage aquaculture(CA) habitats and an assemblage dominated by Sciaenidae species in MF and SB habitats. We suggest that reef fishes play a key role in differentiating fish community structures in the study area. Although few differences in fish abundance and diversity were found between the CA and SB habitats, a more diverse age structure was observed in the CA habitats. A much more complex fish assemblage and enhanced population of local species were established as a result of the presence of both floating and fixed artificial structures, probably through improved survival rates.     

Forest biodiversity assessment in Peruvian Andean Montane cloud forest

Cloud forests are unusual and fragile habitats, being one of the least studied and least understood ecosystems. The tropical Andean dominion is considered one of the most significant places in the world as regards biological diversity, with a very high level of endemism. The biodiversity was analysed in an isolated remnant area of a tropical montane cloud forest known as the "Bosque de Neblina de Cuyas", in the North of the Peruvian Andean range. Composition, structure and dead wood were measured or estimated. The values obtained were compared with other cloud forests. The study revealed a high level of forest biodiversity, although the level of biodiversity differs from one area to another: in the inner areas, where human pressure is almost inexistent, the biodiversity values increase. The high species richness and the low dominance among species bear testimony to this montane cloud forest as a real enclave of biodiversity.     

Impacts of reforestation on woody species composition,species diversity and community structure in dry-hot valley of the Jinsha River,southwestern China

To understand the impacts of reforestation on woody species composition, species diversity and community structure, seven plantation forests in dry-hot valley of the Jinsha River in Southwest China were investigated, with adjacent wastelands, natural shrub grassland and a natural forest as references. Species importance value, species richness, species heterogeneity and Sorenson similarity index between plantations and the natural forest were analyzed. Results indicated that compared to wastelands and natural shrub grassland, reforestation improved species diversity and community structure, and more forest woody species found suitable habitats in plantations. Species diversity in understory of plantations and Sorenson similarity index were significantly negatively correlated with stem density in mature plantations (26-31 years old). Higher species diversity and Sorenson similarity index existed in mature sparse plantations due to lower stem density and more tree species planted initially. In contrast, reference natural forest, with species heterogeneity of 2.28 for shrub layer, showed the highest species diversity. It would take a long time for species composition and diversity to recover through reforestation in a dry-hot valley. Therefore, it was essential to protect remnant natural forests strictly and reforest with suitable management such as lower stem density and increasing genetic diversity of trees planted.     

Diversity patterns and phylogenetic structure of vascular plants along elevational gradients in a mountain ecosystem,South Korea

Recently, a phylogenetic diversity and community structure analysis as complementary to species-centric approaches in biodiversity studies provides new insights into the processes of community assembly. In this study, we analyzed species and phylogenetic diversity and community structures for woody and herbaceous plants along two elevational transects on Mt. Baekhwa, South Korea. The species richness and phylogenetic diversity of woody plants showed monotonic declining patterns with increasing elevation along all transects, whereas herbaceous plants showed different patterns, such as no relationship and a reversed unimodal pattern, between the study transects. The main drivers of these patterns were climate and habitat variables for woody and herbaceous plants, respectively. In addition, the phylogenetic community structure primarily showed phylogenetic clustering regulated by deterministic processes, especially environmental filtering, such as climate or habitat factors, along the two transects, although herbaceous plants along a transect depicted phylogenetic randomness as a result of a neutral process. Our findings suggest that deterministic and neutral processes may simultaneously control the community structures along small-scale elevational gradients such as local transects, although the deterministic process may be the predominant type.     

Alpine Ecosystems of Northwest Yunnan, China： an Initial Assessment for Conservation

Implementing conservation actions on-the-ground is not a straightforward process,especially when faced with high scientific uncertainty due to limited available information. This is especially acute in regions of the world that harbor many unique species that have not been well studied,such as the alpine zone of the Hengduan Mountains of Northwest Yunnan (NWY),a global biodiversity hotspot and site of The Nature Conservancy’s Yunnan Great Rivers Project. We conducted a quantitative,but rapid regional-level assessment of the alpine flora across NWY to provide a broad-based understanding of local and regional patterns of the alpine flora,the first large-scale analysis of alpine biodiversity patterns in this region. Multivariate analyses were used to classify the major plant community types and link community patterns to habitat variables. Our analysis indicated that most species had small distributions and/or small population sizes. Strong patterns emerged with higher diversity in the more northern mountains,but beta diversity was high,averaging only 10% among sites. The ordinations indicated that elevation and geographic location were the dominant environ-mental gradients underlying the differences in the species composition among communities. The high beta diversity across the alpine of these mountains implies that conservation strategies ultimately will require the protection of large numbers of species over a large geographical area. However,prioritiza-tion should be given to areas where potential payoffs are greatest. Sites with high species richness also have a greater number of endemic species,and,by focusing efforts on these sites,conservation investments would be maximized by protecting the greatest number of unique species.     

Diversity,endemism and conservation of ferns (Polypodiales) in the Mexican Mountain Component

We analyzed the distributional patterns of 95 selected species of leptosporangiate ferns inhabiting the Mexican Mountain Component, using grid-cells of one geographical degree as unit areas, applying endemism indices and richness and beta diversity analyses. Distributional data were obtained from several herbaria and specialized literature. Five grid-cells appear to be important for fern species richness, as they contain 35 to 49 species. These grid-cells are located in the Sierra Madre Oriental (SMO), Trans-Mexican Volcanic Belt (TMVB) and the Sierra Madre del Sur (SMS). Mean richness by latitudinal belts of one degree showed that the belts with highest values are related to the TMVB and SMS. A total of 13 grid-cells were recognized as important from the perspective of endemism; most of them are located also in the SMO, TMVB and SMS. The richest gridcells coincided with one of the main centres of endemism for ferns obtained in this study, located in the convergence of the southern part of the SMO, the eastern portion of the TMVB and the northern part of the SMS, reflecting the high humidity existing on the mountain slopes facing the Gulf of Mexico. Some important grid-cells recognized from richness and endemism analyses coincide with Mexican Natural Protected Areas. The beta diversity analysis showed a low degree of similarity among grid-cells, implying a high species replacement, as the result of environmental heterogeneity occurring in the Mexican mountain systems. On the other hand, the spatial analysis suggested a pattern of phytogeographical regionalization comprising two main areas: the Mexican Transition Zone and the Mexican Central Plateau. Ferns play an important role in the Mexican biodiversity and contributing to the beta diversity of Mexico.     

Community structure of epiphytic algae on three different macrophytes at Acarlar floodplain forest （northern Turkey）

The aim of this study was to determine the species composition, biodiversity and, relative abundance of epiphytic algae and their relationship with environmental variables on three different macrophytes( Nymphaea alba, Ceratophyllum demersum, Typha latifolia) at Acarlar Floodplain Forest(AFF). Epiphytic algae were gathered monthly by collecting aquatic plants between November 2011 and October 2012, except in winter when there were no plants. In this study, 67 taxa on N. alba, 66 taxa on C. demersum and 66 taxa on T. latifolia were identified as epiphytic algae. The mean value of species richness was 17, that of diversity was 1.5 and that of evenness was 0.54 for epiphytic algae on N. alba, 17, 1.1, and 0.39 on C. demersum, and 18, 1.64, and 0.56 on T. latifolia, respectively. Oscillatoria sp. and Komvophoron crassum(Vozzen) Anagnostidis and Komárek were the most abundant and consistent epiphytic algal species, occurring in high abundance on all macrophytes. Results show that species composition of epiphytic algae was different, but diversity values were similar on all the macrophytes. The hydrological pulse is one of the most important factors determining the physical and chemical environment of the epiphytic algal community. However, substrate type also affected the colonization by F. capucina, O. sancta, P. catenata, and L. truncicola more than the epiphytic algal seasonality.     

Understory vascular plant community assembly in relation to time-since-fire and environmental variables in a Chinese boreal forest

Understanding the response of understory vegetation to fire disturbance is vital to biodiversity conservation and management of boreal forests. We surveyed understory vascular plant richness and composition, and measured related environmental variables along a toposequence within three successional stages, initial (3 years post-fire), early (13 years post-fire) and late (>100 years post-fire) successional stages. Using permutation multivariate ANOVA and nonmetric multidimensional scaling, we analyzed how understory species richness and composition change as time-since-fire proceeds, and their correlative relationships with environmental variables. Species richness and composition showed significant differences among the three successional stages. Understory species richness and abundance were significantly associated with time-since-fire, topographic position, elevation and organic layer depth. Among these variables, time-since-fire had the strongest effect and topographic position was the second major factor on affecting understory community assembly. In addition, time-since-fire overwhelmed the effects of soil pH in the initial successional stage and gravimetric soil moisture in early and late successional stages on understory species composition     

Climatic and geographic factors affect ecosystem multifunctionality through biodiversity in the Tibetan alpine grasslands

Ecosystem multifunctionality(EMF), the simultaneous provision of multiple ecosystem functions, is often affected by biodiversity and environmental factors. We know little about how the interactions between biodiversity and environmental factors affect EMF. In this case study, a structural equation model was used to clarify climatic and geographic pathways that affect EMF by varying biodiversity in the Tibetan alpine grasslands. In addition to services related to carbon, nitrogen, and water cycling, forage supply, which is related to plantproductivity and palatability, was included in the EMF index. The results showed that 72% of the variation in EMF could be explained by biodiversity and other environmental factors. The ratio of palatable richness to all species richness explained 8.3% of the EMF variation. We found that air temperature, elevation, and latitude all affected EMF, but in different ways. Air temperature and elevation impacted the aboveground parts of the ecosystem, which included plant height, aboveground biomass, richness of palatable species, and ratio of palatable richness to all species richness. Latitude affected EMF by varying both aboveground and belowground parts of the ecosystem, which included palatable speciesrichness and belowground biomass. Our results indicated that there are still uncertainties in the biodiversity–EMF relationships related to the variable components of EMF, and climatic and geographic factors. Clarification of pathways that affect EMF using structural equation modeling techniques could elucidate the mechanisms by which environmental changes affect EMF.     

Regeneration and tree species diversity of Sitakund Botanical Garden and Eco-park,Chittagong, Bangladesh

Anthropogenic disturbances influence plant regeneration and species diversity, which impact the conservation status of protected areas. A study was conducted in the Sitakund Botanical Garden and Eco-park （SBGE）, Chittagong, Bangladesh to analyze the natural regeneration and tree species diversity in disturbed and less disturbed zones. Stratified and systematic random sampling was used to select 50 sample plots from each of the two zones. A total number of 109 plant species from 43 families were recorded in the study; of which 93 species were of natural origin while the rest were planted. From the species with natural origin 66 were tree species, 9 were shrub species and 28 were climbers. Species richness, density of regeneration and disturbance index in the height classes （0- 0.5 m） and {dbh 〉 6 cm） indicated significant differences between the zones. The study analyzed how disturbances affect species diversity in the area. It was found that species richness and basal area are negatively related with disturbances. Moreover, density （N/ha） of trees was more likely to decrease with increasing tree height that reflects the huge demand of local people to harvest large trees as part of their income generating activities. The study findings have implications for future managementdecisions of the SGBE. To restore these ecosystems, management should focus on both biodiversity eonservation and providing benefits to local people without hampering forest ecosystems.     

Metagenomic approach revealed effects of forest thinning on bacterial communities in the forest soil of Mt. Janggunbong,South Korea

The soil microbiome that plays important ecological roles in mountains and forests is influenced by anthropogenic and natural causes. Human activity, particularly harvesting or thinning, affects the soil microbiome in forests by altering environmental conditions, such as vegetation, microclimate, and soil physicochemical properties. The purpose of this study was to investigate the effects on forest thinning on the diversity and composition of the soil bacterial community. From next-generation sequencing results of the 16S rRNA gene, we examined differences in soil bacterial diversity and community composition before and after thinning at Mt. Janggunbong, South Korea. We identified 40 phyla, 103 classes, 192 orders, 412 families, 947 genera, and 3,145 species from the soil samples. Acidobacteria and Proteobacteria were the most dominant bacterial phyla in the forest soil of Mt. Janggunbong. Soil bacterial diversity measures (richness, Shannon diversity index, and evenness) at the phylum level increased after thinning, whereas species-level taxonomic richness decreased after thinning. Thinning provided new opportunities for bacterial species in Chloroflexi, Verrucomicrobia, Nitrospirae, and other nondominant bacterial taxa, especially for those not found in Mt. Janggunbong before thinning, to settle and adapt to the changing environment. Our results suggested that thinning affected the diversity and composition of soil bacterial communities in forests and mountains.     

Shrub Communities and Environmental Variables Responsible for Species Distribution Patterns in an Alpine Zone of the Qilian Mountains,Northwest China

Understanding the factors that drive variation in species distribution is a central theme of ecological research. Although several studies focused on alpine vegetation, few efforts have been made to identify the environmental factors that are responsible for the variations in species composition and richness of alpine shrublands using numericalmethods. In the present study, we investigated vegetation and associated environmental variables from 45 sample plots in the middle Qilian Mountains of the northwestern China to classify different community types and to elucidate the speciesenvironment relationships. We also estimated the relative contributions of topography and site conditions to spatial distribution patterns of the shrub communities using the variation partitioning. The results showed that four shrub community types were identified and striking differences in floristic composition were found among them. Species composition greatly depended on elevation, slope,shrub cover, soil p H and organic carbon. The important determinants of species richness were soil bulk density and slope. No significant differences in species richness were detected among the community types. Topography and site conditions had almost equal effects on compositional variation. Nonetheless,a large amount of the variation in species composition remained unexplained.     

Habitat values for artificial oyster (Crassostrea ariakensis) reefs compared with natural shallow-water habitats in Changjiang River estuary

studies have compared oyster reefs with adjacent natural shallow-water habitats.Here the resident benthic macroinvertebrate communities in an artificial oyster(Crassostrea ariakensis) reef and in adjacent natural estuarine shallow-water habitats(salt marsh,intertidal mudflat,and subtidal soft bottom) in the Changjiang(Yangtze) River estuary were described.The mean total densities and biomass,Margalef’s species richness,Pielou’s evenness and Shannon-Weaver biodiversity indices of the resident benthic macroinvertebrate communities differed significantly among the habitats.Significantly higher densities and biomass of benthic macroinvertebrates occurred in the oyster reef compared with the other three habitats.Ordination plots showed a clear separation in benthic macroinvertebrate communities among the four habitat types.The results demonstrated that the artificial oyster reef supported distinct and unique benthic communities,playing an important role in the complex estuarine habitat by supplying prey resources and contributing to biodiversity.In addition,the results suggested that the oyster reef had been restored successfully.     

Spatial distribution pattern in mammal and bird richness and their relationship with ecosystem services in Sanjiangyuan National Park,China

Species diversity exhibit a close relationship with ecosystem services, and making clear the relationship can help us understand the service value and functional mechanism of ecosystems and take measures to promote human well-being. Here, we used species survey data and multi-source habitat factors to simulate the spatial distribution of species richness and four types of ecosystem services(water production, net primary productivity, carbon storage, and habitat quality) in Sanjiangyuan National Park located in Qinghai Province, China. We also analyzed the spatial distribution pattern and explored the spatial relationship between species richness and ecosystem services through Geo Detector analyses. We found that high species richness in Sanjiangyuan National Park was shown to be mainly distributed in areas with high vegetation growth on both sides of rivers. The effect of climate on the spatial distribution of species richness in the park is the highest among all the selected environmental variables. For the relationship between species diversity and ecosystem services, the relative correlation strength of single ecosystem service varied among the three main ecosystems(grassland, meadow, and wetland) and all relations are positive.     

Development and evaluation of specific PCR primers targeting the ribosomal DNA-internal transcribed spacer(ITS) region of peritrich ciliates in environmental samples

Peritrich ciliates are highly diverse and can be important bacterial grazers in aquatic ecosystems. Morphological identifi cations of peritrich species and assemblages in the environment are time-consuming and expertise-demanding. In this study, two peritrich-specifi c PCR primers were newly designed to amplify a fragment including the internal transcribed spacer(ITS) region of ribosomal rDNA from environmental samples. The primers showed high specifi city in silico, and in tests with peritrich isolates and environmental DNA. Application of these primers in clone library construction and sequencing yielded exclusively sequences of peritrichs for water and sediment samples. We also found the ITS1, ITS2, ITS, D1 region of 28 S rDNA, and ITS+D1 region co-varied with, and generally more variable than, the V9 region of 18 S rDNA in peritrichs. The newly designed specifi c primers thus provide additional tools to study the molecular diversity, community composition, and phylogeography of these ecologically important protists in dif ferent systems.     

Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season

To examine the eukaryotic biodiversity of aquatic ecosystems in the Qiantang River,China,eukaryotic microbes in the river were investigated using 18 S rRNA gene sequencing during the breeding season(July to August 2018).Four distinct distribution patterns(1.Jiande;2.Tonglu and Fuyang;3.Jiubao;4.Yanguan) of the microbial community and their potential effects on fishery activities were observed.Results show lower abundances of Dinophyta and Fungi and higher abundances of Cryptophyta and Chlorophyta in Tonglu and Fuyang than those in the other three sections.In addition,the reserves(Tonglu and Fuyang)destabilized the original eukaryotic microbial co-occurrence network.Among all the environmental factors measured,nitrogen(nitrite,nitrate,ammonium),water temperature and total chlorophyll a acted as major driving factors that controlled the eukaryotic microbial distribution.Furthermore,the existence of some algae(e.g.,Chrysophyceae,Cryptophytes,and Chlorophyceae) and fungi(e.g.,Rhizophydium) in Tonglu and Fuyang was beneficial to juvenile fish growth and water quality,although some detrimental species(e.g.,Aphanomyces) needed attention.This study provides further insights into the sustainable protection and utilization of rivers.     

Species-area relationship within and across functional groups at alpine grasslands on the northern Tibetan Plateau,China

The species-area relationship(SAR) is one of the most fundamental concepts in community ecology and is helpful for biodiversity conservation.However,few studies have systematically addressed this topic for different alpine grassland types on the Tibetan Plateau,China.We explored whether the plant composition of different functional groups affects the manner in which species richness increases with increasing area at scales ≤ 1.0 m~2.We also compared species richness(S) within and across forbs,legumes,sedges and grasses,with sampling subplot area(A) increasing from 0.0625 m~2 to 1.0 m~2 between alpine meadow and steppe communities.We applied a logarithmic function(S = b_0 + b_1 ln A) to determine the slope and intercept of SAR curves within and across functional groups.The results showed that the logarithmic relationship holds true between species richness and sampling area at these small scales.Both the intercept and slope of the logarithmic forbs-area curves are significantly higher than those for the three other functional groups(P 0.05).Forb accounts for about 91.9 % of the variation in the intercept and 75.0% of the variation in the slope of the SAR curve when allfunctional groups' data were pooled together.Our results indicated that the different SAR patterns should be linked with species dispersal capabilities,environmental filtering,and life form composition within alpine grassland communities.Further studies on the relationship between species diversity and ecosystem functions should specify the differential responses of different functional groups to variations in climate and anthropogenic disturbances.