Opportunistic macroalgae metrics for transitional waters. Testing tools to assess ecological quality status in Portugal

Macroalgae communities constitute one of the ecological quality elements for the evaluation of the ecological quality status (EQS) of coastal and transitional waters, required to implement the WFD. While these algae are natural components of estuarine systems and play important roles in several estuarine processes, macroalgal blooms are of ecological concern because they can reduce the habitat quality. Several works are being carried out to set standard methods for monitoring macroalgae blooms, in order to develop tools to derive EQS based upon this biological quality element. The aim of this paper is to apply the methodology described by Scanlan et al. [Scanlan, C.M., Foden, J., Wells, E., Best, M.A., 2007. The monitoring of opportunistic macroalgal blooms for the water framework directive. Marine Pollution Bulletin 55, 162–171] to a series of data assembled in the south arm of the Mondego estuary (Atlantic coast of Portugal) considering two different ecological situations. Additionally, an alternative assessment method intended to be used when no biomass data are available was also tested. In general, both options captured the inter-annual variations in accordance with the system evolution. Option 2, less expensive and time-consuming, allowed an EQS evaluation with accurate results when biomass data were not available. The results suggest that sampling should be carried out from April to June.     

Microbiological Indices for total coliform and E. coli bacteria in estuarine waters

Bacterial counts for total coliforms and E. coli in estuaries are normally orders of magnitude greater at the freshwater end than at the seaward end and tidal movements and variations in freshwater flows produce continual change in the freshwater/seawater mix--this causes the bacterial counts to vary greatly throughout the estuary and the complexity creates difficulty in appraising or assessing the bacterial counts (i.e. difficulties arise when deciding if the bacterial counts for estuarine water samples are within an acceptable range--relative to their corresponding salinities). The situation is further complicated in estuaries where sewage is discharged directly. Microbiological criteria and indices that can be used in a practical way to overcome these difficulties were developed. The procedure is summarised as follows: 1. Primary criteria are proposed for total coliform and for E. coli bacteria in the freshwater at the head of the estuary and in full seawater at the mouth of the estuary. 2. For estuarine or transitional waters (i.e. waters with salinity ranging from 0 per thousand to 35 per thousand), distinct criteria are calculated for each individual sample--with a separate criterion for total coliforms and for E. coli--the individual criteria are founded on the primary criteria and vary with salinity on a pro-rata or linear basis. 3. Finally, the Microbiological Index for each result is obtained by dividing the actual bacterial count by the corresponding criterion--the acceptable Index is then equal to 1--at any salinity (i.e. where the Index is <1 then the bacterial count complies with the criterion, and where the Index is >1 then the count breaches the criterion). The Index also indicates the extent of the compliance or non-compliance with the corresponding criteria. An example of the application of the Microbiological Index is also presented--including examples of graphs that demonstrate how microbiological data for estuarine waters can be summarised and presented.     

Effects of heavy metal contamination on the macrobenthic fauna in estuaries: the case of the Seine estuary

Heavy metal contamination levels are generally higher in estuaries than in the open sea. Some estuaries, the Seine estuary for example, have particularly high pollution levels of metals, yet continue to support a very high benthic biomass and remain quite productive. Measurements of sediment contamination are highly variable due to diverse chemical analysis methods, sediments origin and sources of contaminants found in the estuaries. Salinity appears to be the principal factor controlling contaminant distribution in the sediment and the overlying and/or interstitial waters; it also affects the bioavailability of contaminants in estuarine sediments. Of course, the response to contaminants varies greatly among species and assemblages. Trace metals explain only a small part of the variation in benthic community structure. Some species, such as the shrimp Crangon crangon, appears vulnerable to metal pollution, while other species, such as Scrobicularia plana, are able to tolerate quite high levels of cadmium in their tissue. This paper demonstrates the wide variability of benthic responses to contamination, which is probably due to the high spatio-temporal heterogeneity of the estuary. To reduce the problems due the heterogeneity and variability observed to date in the available results, it will be necessary to encourage integrated estuarine studies, in which sedimentologists, chemists, and biologists work together on the same campaigns at the same sites.     

Quality assessment of benthic macroinvertebrates under the scope of WFD using BAT, the Benthic Assessment Tool

Assessing the health of ecosystems has become a focal point among researchers worldwide. Recently, the European Water Framework Directive intensified the development of approaches to assess ecosystems’ ecological quality. The Benthic Assessment Tool (BAT) is a multimetric approach to evaluate condition of subtidal soft bottom macroinvertebrates of coastal and transitional waters. The effects of anthropogenic disturbances on benthic macroinvertebrate communities, from 1990 to 2006, allowed testing BAT performance in Mondego estuary (Portugal). The method was able to detect decrease on ecological quality, induced essentially by eutrophication and physical disturbances, and follow communities’ subsequent recovery. It evidenced, nevertheless, some limitations associated with the unstable nature of estuaries. The ecological classification of key species in the community and the balance expected between ecological groups of estuarine communities had great influence in the final ecological assessment. Shortcomings of the method were discussed in the light of its suitability for assessing transitional waters’ condition.     

Evaluation of diffusive gradients in thin-films (DGTs) as a monitoring tool for the assessment of the chemical status of transitional waters within the Water Framework Directive

In this contribution, the potential use of diffusive gradients in thin-films (DGTs) for the chemical evaluation of transitional water bodies within the Water Framework Directive (WFD) has been studied. The water metal concentration has been evaluated in 13 estuaries in the southeastern Bay of Biscay. The DGTs were deployed in triplicate at two stations in each estuary, delimiting the tidal influence. The DGT results were in the ranges of 2-1570 ng L(-1) for cadmium, 66-515 ng L(-1) for copper, 30-3650 ng L(-1) for nickel and 0.8-95.5 μg L(-1) for zinc. The DGTs provided reliable average labile metal concentrations in highly dynamic systems that were comparable with DGT measurements in coastal and estuarine waters worldwide. In addition, it was possible to discriminate those estuaries more susceptible to environmental impacts, being consistent with the historical contamination of each estuary. Based on the obtained results, a sampling strategy for the monitoring of transitional water bodies using DGTs is proposed.     

Natural tracers for sediment transport studies

The use of natural differences in composition between marine and fluvial sediments makes it possible to determine their mixing ratio in estuarine deposits. Differences in chemical, mineralogical and isotope geochemical composition can be used as tracers, provided that three criteria are met: conservative behaviour during transport, with time, and after deposition. Examples of the utility of natural tracers are presented, including their use for the interpretation of pollutant patterns in estuaries. The application of natural tracers has shown that marine sediments may be transported past the freshwater boundary in estuaries, and thus contribute to the sedimentation in freshwater tidal areas.     

Evidence for the effects of metal contamination on the intertidal macrobenthic assemblages of the Fal Estuary

The intertidal invertebrate macrofauna of five creeks in the Fal estuarine system, Cornwall, UK, is compared with data from 40 locations in six other estuaries in south-west Britain. Multivariate analysis shows that the community composition in the Fal is distinct from all the other estuaries. The differences are principally due to the absence of two crustacean species, Corophium voluntator and Cyathura carinata, and the high abundance of small opportunistic annelid species. The Fal Estuary is heavily contaminated with heavy metals as a result of mining in the catchment, and the faunistic features are commensurate with what is known of the relative sensitivities of marine invertebrate taxa to pollution.     

Effect of tidal forcing on a subterranean estuary

Groundwater flow and chemical transport in subterranean estuaries are poorly understood despite their potentially important implications for chemical fluxes from aquifers to coastal waters. Here, a numerical study of the dynamics in a subterranean estuary subject to tidal forcing is presented. Simulations show that salt transport associated with tidally driven seawater recirculation leads to the formation of an upper saline plume in the intertidal region. Computed transit times and flow velocities indicate that this plume represents a more active zone for mixing and reaction than the dispersion zone of the lower, classical salt wedge. Proper conceptualisation of this surficial mixing zone extends our understanding of processes within the subterranean estuary. Numerical tracer simulations reveal that tidal forcing may reduce the threat of a land-derived contaminant discharging to the marine environment by modifying the subsurface transport pathway and local geochemical conditions. Mixing and stratification in the subterranean estuary are strongly affected by both inland and tidal forcing. Based on the estuarine analogy we present a systematic classification of subterranean estuaries.     

Is it possible to assess the ecological status of highly stressed natural estuarine environments using macroinvertebrates indices?

Several biotic indices have been proposed for the assessment of the ecological status of benthic macroinvertebrates in marine waters, although none have been generally accepted. When it comes to assessing highly stressed natural environments, such as estuaries, the controversy and uncertainty is much higher than for any given normal index. In this article, we test the behavior and suitability of different biotic indices proposed under the perspective of the Water Framework Directive (S, H, AMBI, M-AMBI, BQI, W-statistic, Taxonomic distinctness) for the assessment of estuaries in northern Spain. The low species richness and dominance of a few tolerant species in the characteristic community of these estuaries presented a challenge to the application of the biotic indices tested. Combined approaches that integrate different aspects of water quality and ecosystem functionality could increase the reliability of the ecological assessment of these transitional waters.     

Nitrogen over enrichment in subtropical Pearl River estuarine coastal waters: Possible causes and consequences

Hong Kong is surrounded by estuarine, coastal and oceanic waters. In this study, monthly averages over a 10 year time series of salinity, temperature, chlorophyll a (chl a), dissolved oxygen (DO), dissolved inorganic nitrogen (DIN), silicate (SiO₄) and orthophosphate (PO₄) at three representative stations around Hong Kong were used to examine if excess nitrogen in estuarine influenced waters is due to P limitation. The monthly distribution clearly shows the dominant influence of the seasonal change in river discharge in the Pearl River estuary and adjacent coastal waters. In winter, the river discharge is small and more oceanic waters are dominant and as a result, salinity is high, and chlorophyll and nutrients are low. In summer, when the river discharge is high, salinity decreases and nutrients increase. DIN is very high, reaching 100 μM in the estuary. This indicates over enrichment of nitrogen relative to P and consequently there is an excess of N in coastal waters of Hong Kong. P remains low (∼1 μM) and can potentially limit both phytoplankton biomass and N utilization which was demonstrated in field incubation experiments. P limitation would result in excess N being left in the estuarine influenced waters south of Hong Kong. Phosphate concentration is lower in the Pearl River estuary than in many other eutrophied estuaries. Therefore, this relatively low PO₄ concentration should be a significant factor limiting a further increase in the magnitude of algal biomass and in the degree of eutrophication in the Pearl River estuary. The export of the excess N offshore into the northern South China Sea may result in an increase in the size of the region that is P limited in summer.     

Crustacean assemblages in a polluted estuary from South-Western Spain

The spatial-temporal variation in crustacean assemblages of the Odiel-Tinto estuary, one of the most polluted areas in the world, was studied in 2000, 2002 and 2004. The crustacean assemblages were mainly established according to the natural gradient from estuarine to marine environment (based on water and sediment characteristics such as dissolved oxygen, salinity, granulometry or organic content). Pollutants such as copper, zinc or phosphates could also explain partially this pattern based on BIOENV and canonical correspondence analyses. However, there were clear symptoms of perturbation, mainly in the inner areas, such as a low number of species and a low abundance, especially in relation to the typical estuarine species (e.g. Cyathura carinata, Corophium spp.). This study provides baseline information which can be used as a reference point in a long-term perspective.     

Spatio-temporal variability of phytoplankton assemblages in the Pearl River estuary, with special reference to the influence of turbidity and temperature

The Pearl River Estuary is among the largest estuaries in the subtropical areas of the world. Along the salinity and turbidity gradient between the freshwater reach of the Pearl River and the marine water of the South China Sea, the spatial and temporal composition and abundance of phytoplankton was examined in relation to physic-chemical variables during the dry and wet seasons of 2009. Water samples for phytoplankton and environmental parameters were collected from 18 stations during two seasons along a transect from upper estuary to estuarine and marine sectors. A total of 162 species belonging to 7 phyla were identified, with diatoms dominated in both seasons while dinoflagellates proliferated in autumn. Two main clusters and three sub-clades under each main cluster corresponding to seasons and water sectors were defined with multivariate analysis (cluster and nMDS). Based on the species composition and abundance of phytoplankton, both seasonal and spatial variability were observed at a significant level (ANOSIM: season effect, R=0.896, P<0.01; station effect, R=0.463, P<0.01). The correlation analysis between biotic and abiotic variables indicated that instead of the “proverbial” anthropogenic nutrients loading and salinity gradient, the best 2-variable combination (temperature and turbidity) showed a significant effect on the pattern of phytoplankton assemblages (ρ_w=0.49, BIOENV analysis) between wet and dry seasons in the Pearl River Estuary. This result suggests that physical disturbance either natural or manmade is a more important factor in regulating the phytoplankton community structure within the hydrologically distinct zone of estuaries.     

Spatial and temporal variation in hexachlorocyclohexane isomers in a temperate estuary

Hexachlorocylcohexanes (HCHs) are pesticides that persist in air and water of the Northern hemisphere. To understand the spatial and temporal variability in HCH levels in estuarine surface waters we measured concentrations of two HCH isomers (-HCH and γ-HCH) at six sites in the York River estuary at bimonthly intervals for a year. Bacterial abundance and activity were also monitored using acridine orange direct counts and uptake of tritiated substrates, respectively. -HCH was consistently observed to be significantly higher in marine water compared to river water entering the estuary, suggesting that the Chesapeake Bay or Atlantic Ocean is a larger source of this compound to the York River estuary compared to riverine input. Moreover, following periods of high freshwater flow into the estuary during spring and early summer, both - and γ-HCH mixing curves indicated an additional source of these pollutants to the estuary such as land-derived runoff or groundwater discharge. In contrast, during low freshwater flow (late summer and fall) the estuary was a sink for HCHs, with γ-HCH more rapidly removed from the estuary than -HCH. During the period of low freshwater flow, concentrations of both - and γ-HCH were negatively correlated with bacterial activity. Bacterial activity as opposed to abundance appears to control HCH degradation in estuarine surface waters.     

Inorganic As speciation and bioavailability in estuarine sediments of Todos os Santos Bay, BA, Brazil

The spatial distribution of As (total As, As (III) and As (V)) in estuarine sediments from the main tributaries of Todos os Santos Bay, BA, Brazil, was evaluated under high and low flow conditions. The concentrations of As were determined using a slurry sampling procedure with hydride generation atomic absorption spectrometry (HG-AAS). The highest concentrations were observed at estuary mouths, and exceeded conservative lower threshold value (Threshold Effects Level; TEL). Due to the oxic conditions and abundance of Mn and Fe (oxyhydr)oxides in the sediments, most inorganic arsenic in the Subaé and Paraguaçu estuaries was present as As (V). Nevertheless, the concentration of As (III) at several locations along the Jaguaripe River were also above the TEL value, suggesting that As may be toxic to biota. In the Subaé estuary, antropogenic activities are the main source of As. At the Jaguaripe and at Paraguaçu estuaries, nevertheless, natural sources of As need to be considered to explain the distribution patterns.     

Generation of overtides and compound tides in Amazon estuary

Tidal propagation in estuaries is affected by friction and fresh water discharge, besides changes in the depth and morphology of the channel. Main distortions imply variations in the mean water level and asymmetry. Tidal asymmetry can be important as a mechanism for sediment accumulation and turbidity maximum formation in estuaries, while mean water level changes can affect navigation depths. Data from several gauges stations from the Amazon estuary and the adjacent coast were analyzed and a 2DH hydrodynamic model was configured in a domain covering the continental shelf up to the last section of the river where the tidal signature is observed. Based on data, theoretical and numerical results, the various influences in the generation of estuarine harmonics are presented, including that of fresh water discharge. It is shown that the main overtide, M₄, derived from the most important astronomic component in the Amazon estuary, M₂, is responsible for the tidal wave asymmetry. This harmonic has its maximum amplitude at the mouth, where minimum depths are found, and then decreases while tide propagates inside the estuary. Also, the numerical results show that the discharge does not affect water level asymmetry; however, the Amazon river discharge plays an important role in the behavior of the horizontal tide. The main compound tide in Amazon estuary, Msf, generated from the combination of the M₂ and S₂, can be strong enough to provoke neap low waters lower than spring ones. The results show this component increasing while going upstream in the estuary, reaching a maximum and then slightly decaying.     

Influence of variable salinity conditions in a tidal creek on riparian groundwater flow and salinity dynamics

While recent studies have revealed that tidal fluctuations in an estuary significantly affect groundwater flows and salt transport in the riparian zone, only seawater salinity in the estuary has been considered. A numerical study is conducted to investigate the influence of estuarine salinity variations on the groundwater flow and salt dynamics in the adjacent aquifer to extend our understanding of these complex and dynamic systems. Tidal salinity fluctuations (synchronous with estuary stage) were found to alter the magnitude and distribution of groundwater discharge to the estuary, which subsequently impacted on groundwater salinity patterns and residence times, especially in the riparian zone. The effects of salinity fluctuations were not fully captured by adopting a constant, time-averaged estuarine salinity. The modelling analysis also included an assessment of the impact of a seasonal freshwater flush in the estuary, similar to that expected in tropical climates (e.g. mean estuary level during flood significantly greater than average), on adjacent groundwater flow and salinity conditions. The three-month freshwater flushing event temporarily disrupted the salt distribution and re-circulation patterns predicted to occur under conditions of constant salinity and tidal water level fluctuations in the estuary. The results indicate that the salinity variations in tidal estuaries impact significantly on estuary–aquifer interaction and need to be accounted for to properly assess salinity and flow dynamics and groundwater residence times of riparian zones.     

Significant variations in the productivity of green macroalgae in a mesotidal estuary: implications to the nutrient loading of the system and the adjacent coastal area

A spatially dynamic model for the productivity of spores and adults of green macroalgae (Enteromorpha sp.) was developed for a mesotidal estuary (Mondego estuary, Portugal). Many of the algal processes and parameters included in the model were experimentally obtained. Model predictions were compared to a real time series (1993-1997) of macroalgal biomass variation and the two sets show a good agreement (ANOVA, P<0.001). Results suggest that algal growth is highly sensitive to small changes in depth and exhibits different patterns of variation in different seasons. On a yearly basis, global calculations for the south channel of the estuary (137 ha) suggest that during bloom years, macroalgal biomass may reach about 21,205 ton DW compared to 240 ton DW in regular years. On a seasonal basis, the difference may be even more significant. The consequences of such variations on the nitrogen and phosphorus loading of the system and the adjacent coastal area are discussed.     

Estuarine modification of nutrient and sediment exports to the Great Barrier Reef Marine Park from the Daintree and Annan River catchments

Nutrient and suspended sediment concentrations were measured in the dry season and during the rising and falling stages of flood events in the Annan and Daintree rivers to estimate catchment exports. These flood events were also sampled along the salinity gradient in the estuary and nearshore shelf to quantify the modification of terrestrial sediment and nutrient loads as they pass through estuaries into the Great Barrier Reef lagoon. In the Daintree River TSS concentrations were found to increase between the catchment and the estuary plume. The source of TSS may have been scour of the estuarine channel or from land use in the catchment of the lower estuary. In the dry season nitrogen enters the Annan and Daintree estuaries predominantly in the form of PON and DON in roughly equal proportions. Nitrogen exports to the GBR are mostly in the form of DON. In the wet season the majority of nitrogen enters the estuaries as DON and leaves as PON. Nitrogen removal in the estuaries and plumes appears to be biologically mediated once suspended sediment concentrations decrease to a point where phytoplankton growth is not light limited. In the dry season phosphorus enters and leaves the estuaries primarily in organic form. PIP is the dominant form of phosphorus in river water, but leaves the estuary more evenly distributed between all forms. These estuarine processes result in less nitrogen and phosphorus being delivered to the GBR lagoon than is exported from the catchment. The differences between these estuaries highlights the need for further work to explore modifications in estuaries that drain into the Great Barrier Reef lagoon.     

Benthic species as mud patrol - modelled effects of bioturbators and biofilms on large-scale estuarine mud and morphology

Sediment-stabilizing and -destabilizing organisms, i.e. microphytobenthos (biofilms) and macrozoobenthos (bioturbators), affect the erodibility of muddy sediments, potentially altering large-scale estuarine morphology. Using a novel eco-morphodynamic model of an idealized estuary, we investigate eco-engineering effects of microphytobenthos and two macrozoobenthic bioturbators. Local mud erodibility is based on species pattern predicted through hydrodynamics, soil mud content, competition and grazing. Mud resuspension and export is enhanced under bioturbation and prevented under biostabilization through respective exposure and protection of the supra- and intertidal. Bioturbation decreases mud thickness and bed elevations, which increases net mud fluxes. Microphytobenthos reduces erosion, leading to a local mud increase of intertidal sediments. In multi-species scenarios, an effective mud-prone bioturbator strongly alters morphology, exceeding that of a more abundant sand-prone moderate species, showing that morphological change depends on species traits as opposed to abundance. Altering their habitat, the effective mud-prone bioturbator facilitates expansion of the sand-prone moderate bioturbator. Grazing and species competition favor species distributions of dominant bioturbators. Consequently, eco-engineering affects habitat conditions while species interactions determine species dominance. Our results show that eco-engineering species determine the mud content of the estuary, which suggests large effects on the morphology of estuaries with aggravating habitat degradation.     

New definitions, regionalization, and typification of river mouth areas and estuaries as their parts

The problems of studying river mouth areas and their parts, namely, estuaries and deltas are discussed. The step is taken to combine the concept of river mouth area and mouth processes developed in our country with the concept for estuary and estuarine processes widely spread among foreign scientists. In this connection, the article offers new definitions of a river mouth area and estuary as well as new schemes of regionalization of river mouth areas and typification of estuaries. The types of river mouth areas and estuaries are illustrated by case studies.