Characterization of Frequency and Aggregation of the Antarctic Krill (<Emphasis Type="Italic">Euphausia superba</Emphasis>) Using Acoustics

In this study, the dB difference and characteristics of krill swarms inhabiting Subarea 48.1, which includes the west and south of the South Shetland Island and the Elephant Island peripheries, were estimated to distinguish Antarctic krill, using acoustics. From April 13 to 24, 2016, acoustic data were collected along 24 survey lines using the frequencies 38 and 120 kHz, and middle trawling was performed at 7 stations. Using the difference between the dB values of two volume backscattering strength (Sv) frequencies (38 and 120 kHz), a clear acoustic distinction could be made between Antarctic krill (4.9 to 12.0 dB) and fish (?4.0 to ?0.2 dB). The distributions and mean Sv of krill swarms in the Elephant Island peripheries and south of South Shetland Island were higher than those in the west of South Shetland Island. The mean length/ height ratio of krill swarms in the west of the South Shetland Island (64.5) was higher than that in the south (35.9) and the Elephant Island peripheries (33.8), with the length of the aggregations exceeding their height. Most krill swarms were distributed between the surface layer (less than 10 m below sea level) and within 200 m of water depth. These results are expected to serve as baseline data for evaluating krill density and biomass by distinguishing them from fish, using acoustics.     

Effects of temperature on growth,photophysiology, Rubisco gene expression in <Emphasis Type="Italic">Prorocentrum donghaiense</Emphasis> and <Emphasis Type="Italic">Karenia mikimotoi</Emphasis>

To explore the effects of temperature changes on dinoflagellate bloom succession in the coastal waters of the East China Sea, changes in the growth, photophysiology, and Rubisco gene expression of Prorocentrum donghaiense and Karenia mikimotoi, two harmful algal species, were investigated at different temperatures (16 to 28°C). The maximal specific growth rate and the maximal mRNA expression of Rubisco gene in P. donghaiense and K. mikimotoi occurred at 20 and 24°C, respectively. The photosynthetic activity of P. donghaiense was generally stable, but K. mikimotoi photosynthesis increased when temperatures rose from 16 to 28°C. The effective photochemical efficiency (F _q ^′ /F _m ^′ ) and the maximal relative electron transfer rate (rETR_max) of K. mikimotoi increased significantly with increasing temperature, and the lowest and highest values occurred at 16 and 28°C, respectively. It seems that P. donghaiense has higher photosynthetic capacity than K. mikimotoi due to its higher F _q ^′ /F _m ^′ , rETR_max, and photosynthetic efficiency (α). However, K. mikimotoi has a higher growth rate than P. donghaiense. These results suggest that the photosynthetic activity and genetic responses of dinoflagellates are species-dependent. It is likely that temperature changes affect species composition during blooms, leading to the observed patterns of bloom succession.     

High mortality and poor growth of green mussels, <Emphasis Type="Italic">Perna viridis</Emphasis>, in high chlorophyll-<Emphasis Type="Italic">a</Emphasis> environment

The current study was carried out from May 2014 to April 2015 to estimate the stock status of P. viridis in Marudu Bay. The gonad development was monitored by histological examination, while the population parameters including asymptotic length (L_∞), growth coefficient (K), mortality rate (Z, F and M), exploitation level (E) and recruitment of P. viridis were estimated using the lengthfrequency data. Results of the current study demonstrated that P. viridis in Marudu Bay spawned throughout the year with two major peaks, one in April to May and another one in October to December. The recruitment pattern was continuous with the peak in May to June 2014, which corresponded to the first spawning peak in April. However, no significant recruitment was observed from the second spawning peak due to the difference in spawning timing between male and female populations. The estimated asymptotic length (L_∞), growth coefficient (K), total mortality (Z), natural mortality (M), fishing mortality (F) and growth performance (ф) of P. viridis in Marudu Bay were estimate to be 117 mm, 0.97 yr^-1, 4.39 yr^-1, 1.23 yr^-1, 3.16 yr^-1 and 4.123, respectively. The exponent b of the lengthweight relationship was 2.4 and exploitation level (E) was 0.72. The high mortality, low condition indices and negative allometric of P. viridis in Marudu Bay is caused by a lack of suitable food in the surrounding water.     

<Emphasis Type="Italic">Zostera marina</Emphasis> seed burial can be enhanced by Manila clam <Emphasis Type="Italic">Ruditapes philippinarum</Emphasis>: A microcosm study

Seagrass seed bank plays a key role in the regeneration of new vegetation when seagrasses are removed by the natural or man-made disaster. Various factors may affect the development of sediment seed bank. We conducted a microcosm experiment to test the effects of burrowing and feeding activities of Manila clam, Ruditapes philippinarum on the burial of Zostera marina seeds in sediments. The effects of lasting time (3-hour, 1-day, 3-day, 7-day, 14-day and 28-day), clam density (0, 2, 4 and 8 clams with shell length of 3 cm in each microcosm) and clam size (shell length of 2, 3 and 4 cm at 4-clam density) on seed burial were examined in plastic microcosm cores (30 cm high × 10 in inner diameter) in a 28-day period. Results showed that the seed burial depth significantly increased with time, the density and the size of clams. No seeds were buried in the sediment in the cores without clams during the whole experiment period. For the 3-cm clams, about 91.61% of the seeds were buried in the sediment at the end of the experiment in the high-density treatment (8 clams at each core); while in the medium and low-density treatments (4 and 2 clams in each core, respectively), about 76.93% and 60.61% of the seeds were buried in the sediment, respectively. For the size treatments, large (4 cm) clams buried 89.56% of the seeds at the end of the experiment, much more than those of medium (3 cm, 76.93%) and small (2 cm, 61.50%) size clams. During the whole experiment period, nearly all of the buried seeds were at a depth of from 0 cm to 5 cm. These results suggested that Manila clam Ruditapes philippinarum may play an important positive role in seagrass seed bank dynamics in the field.     

Molecular phylogeny of the genus <Emphasis Type="Italic">Chondracanthus</Emphasis> (Rhodophyta), focusing on the resurrection of <Emphasis Type="Italic">C. okamurae</Emphasis> and the description of <Emphasis Type="Italic">C. cincinnus</Emphasis> sp. nov.

Determining the taxonomic status of the red algal genus Chondracanthus based on morphological characters is challenging due to the similarity and high degree of plasticity of the thallus. Since the taxonomic history of several Chondracanthus species remains unclear, we analyzed the plastid rbcL and mitochondrial COI genes of the specimens from Korea and Japan, in combination with morphological observations, to examine their phylogenetic relationships. Our results confirmed the distinction of C. okamurae, which is separated from C. intermedius, and identified a novel species, C. cincinnus sp. nov. Three species (C. okamurae, C. intermedius and C. cincinnus) formed a monophyletic clade with C. tenellus. C. okamurae is distinguished by linear, narrow, cylindrical to compressed, slightly recurved axes, and a high-intertidal to subtidal distribution. It was collected from Korea and Japan, while C. intermedius was identified from Japan only. A new species, Chondracanthus cincinnus sp. nov., is characterized by linear, compressed, strongly recurved axes, and a low-intertidal to subtidal distiribution. Based on the molecular phylogeny using rbcL and COI data, we herein resurrect C. okamurae as a distinct species and identify C. cincinnus as a new species.     

Hybrid <Emphasis Type="Italic">N</Emphasis>-order Lagrangian interpolation Eulerian-Lagrangian method for salinity calculation

The Eulerian-Lagrangian method (ELM) has been used by many ocean models as the solution of the advection equation, but the numerical error caused by interpolation imposes restriction on its accuracy. In the present study, hybrid N-order Lagrangian interpolation ELM (LiELM) is put forward in which the N-order Lagrangian interpolation is used at first, then the lower order Lagrangian interpolation is applied in the points where the interpolation results are abnormally higher or lower. The calculation results of a step-shaped salinity advection model are analyzed, which show that higher order (N=3-8) LiELM can reduce the mean numerical error of salinity calculation, but the numerical oscillation error is still significant. Even number order LiELM makes larger numerical oscillation error than its adjacent odd number order LiELM. Hybrid N-order LiELM can remove numerical oscillation, and it significantly reduces the mean numerical error when N is even and the current is in fixed direction, while it makes less effect on mean numerical error when N is odd or the current direction changes periodically. Hybrid odd number order LiELM makes less mean numerical error than its adjacent even number order LiELM when the current is in the fixed direction, while the mean numerical error decreases as N increases when the current direction changes periodically, so odd number of N may be better for application. Among various types of Hybrid N-order LiELM, the scheme reducing N-order directly to 1st-order may be the optimal for synthetic selection of accuracy and computational efficiency.     

Temporal changes in the geographic distribution of two clam species <Emphasis Type="Italic">Meretrix lusoria</Emphasis> and <Emphasis Type="Italic">M. petechialis</Emphasis> along the coast of Japan and South Korea

The objectives of this study were to distinguish fossil specimens of Meretrix (Bivalvia, Veneridae) using discriminant score and multivariate analysis, and to examine temporal changes in the geographical distributions of M. lusoria and M. petechialis in Japan and South Korea. Fossil shells of Meretrix were collected from Miyagi, Fukui, Aichi and Kumamoto in Japan, and Gimhae, Seosan, Siheung and Ganghwa-do in South Korea. The outside of the right valve was photographed with a digital camera, and ten characteristics of the shell morphology, such as shell height and shell length, were measured using image analysis software and a digital slide caliper. The discriminant score and multivariate analysis of the shell morphology identified all of the examined fossils as M. lusoria, while living individuals collected from the western coast of South Korea were identified as M. petechialis. These results suggest that the fossil shells excavated from the western coast of South Korea are a different species from the living individuals collected from the same areas. Radioactive carbon isotopic results revealed that the ages of the four fossil shells collected from tidal flats in Ganghwa-do ranged between 3,270 ± 30 and 1,830 ± 30 Cal BP. These results suggest that M. lusoria inhabited the western coast of South Korea until at least 2,000 years ago, but was replaced by M. petechialis during the last 2,000 years. Therefore, we propose that either M. petechialis spats were introduced artificially, or planktonic larvae migrated naturally from China to the western coast of South Korea during the last 2,000 years.     

Changes in the egg production rate of two copepod species of the genus <Emphasis Type="Italic">Pseudocalanus</Emphasis> in relation to temperature in the White Sea

This study examines changes in egg production rates of two co-occurring Pseudocalanus species, P. acuspes and P. minutus, in response to changing temperatures (0, 3, 6, 9 and 12°C) in the White Sea. The boreal P. acuspes (sample size >650 individuals) increased its reproductive rate gradually across the entire range of temperatures from 0 to 12°C. Significant differences in egg production rates and reaction to temperature were also observed between P. acuspes females incubated during the early vs. the mid-summer season. The sample size of the Arctic P. minutus was significantly smaller due to the low numbers at which this species occurred. However, the results suggest that this species increases its egg production rates from 0 to 3°C from 3.3 to 8.5% dry weight female^–1 day^–1, but at 9° its reproductive rate drops significantly and the animals demonstrate markedly reduced fitness. Our results indicate that closely related co-occurring species, and even different generations within one species, can demonstrate significantly different responses to changes in the physical environment.     

Phylogenetic relationship between symbionts of tubeworm <Emphasis Type="Italic">Lamellibrachia satsuma</Emphasis> and the sediment microbial community in Kagoshima Bay

Vestimentiferan tubeworms acquire their symbionts through horizontal transmission from the surrounding environment. In the present study, we constructed a 16S rRNA gene clone library to investigate the phylogenetic relationship between diverse microbes in the sediment and symbiotic bacteria in the trophosome of the tubeworm, Lamellibrachia satsuma, from Kagoshima Bay, Japan. Two symbiotic bacterial phylotypes belonging to the classes γ- and ε-Proteobacteria were found from this tubeworm trophosome. They were very closely related to the symbionts of several other marine invertebrates. The most predominant bacteria in the sediment were ε-Proteobacteria. A broad diversity of bacteria belonged to non-proteobacterial phyla such as Planctomycetes, Acidobacteria, and Chloroflexi was observed. The presence of sulfur oxidizers (i.e., ε-Proteobacteria and γ-Proteobacteria) and sulfur reducers (i.e., δ-Proteobacteria) may play a significant role in the sulfur cycle in these habitats and provide multiple sources of nutrition to the cold-seep communities. Closely related clones of ε-Proteobacteria symbiont in the species level and of γ-Proteobacteria symbiont in the genus level were found in the surrounding sediment. The similarity of symbiont clones of L. satsuma with other symbionts and free-living bacteria suggests the possibility of opportunistic symbiosis in ε-Proteobacteria and the co-evolution of γ-Proteobacteria having occurred after symbiosis with the tubeworms.     

Grazing Impact of the Copepod <Emphasis Type="Italic">Calanus sinicus</Emphasis> on Phytoplankton in the Northern East China Sea in Late Spring

We investigated the feeding habits of Calanus sinicus during its four developmental stages as copepodite 4 (CIV), copepodite 5 (CV), adult males and females in early June 2015 at 12 sampling stations along the southern coast of Korea to the northern East China Sea, to better understand the role of C. sinicus in controlling phytoplankton stocks. Ingestion rate, daily ration as body carbon, population ingestion rate, and grazing impact were estimated using the gut pigment method. The mean biomass of CVs was the greatest (13.5 mg C m^–3) and that of adult males was the lowest (0.7 mg C m^–3). The ingestion rate per C. sinicus individual tended to increase with developmental stage, with the highest rate in adult females (519 ng chl ind^–1 d^–1) and the lowest rate in CIVs (305 ng chl ind^–1 d^–1). A significant correlation was found between ingestion rate and temperature, but not salinity or chlorophyll-a concentration. The daily ration of C. sinicus as body carbon significantly decreased with increased body weight, with the highest value found in CIVs (66.4%) and the lowest value in adult males (30%). Despite the high ingestion rate of the adults, the mean grazing impact of C. sinicus on phytoplankton biomass, in terms of chlorophyll-a concentration, was the highest in CVs (2.6%), followed by CIVs and adult females, and was the lowest in adult males (0.1%). The higher grazing impact of copepodites than adults underscores the importance of evaluating copepodite stages in the feeding studies of marine food webs.     

Winter thermal inversion and <Emphasis Type="Italic">Trichodesmium</Emphasis> dominance in north-western Bay of Bengal

Clear thermal inversion was observed with cold surface waters (< 24°C) overlying the warm (> 26°C) subsurface water in the coastal waters of the northwestern Bay of Bengal during winter (January 2015). Simultaneously, preponderance of the cyanobacteria Trichodesmium erythraeum was observed dominating the phytoplankton community with > 90% of total population, reaching maximum density of 9.8 × 10⁵ filaments/L. Further, the Trichodesmium predominance was associated with low water temperature (< 24°C).     

Reproductive biology of blood cockle <Emphasis Type="Italic">Anadara granosa</Emphasis> (Bivalvia: Arcidae) in the northern region of the Strait of Malacca

A study on the reproductive cycle of the blood cockle Anadara granosa (Bivalvia: Arcidae) was conducted at three different areas in the northern region of the Strait of Malacca. A total of 1,920 samples of adult A. granosa (38–71 mm length) were collected from June 2009 until September 2010. Qualitative techniques (gonadal microscopic fresh smear test and histology analysis) as well as quantitative techniques (analysis of condition index and gonadal index) were used to predict monthly gonadal development stages of A. granosa. The gonadal index of A. granosa from Banda Aceh (Indonesia) (r = 0.469, P > 0.05) and Pulau Pinang (Malaysia) (r = 0.123, P > 0.05) did not show any correlation to their condition index, whereas the gonadal index of A. granosa from Lhokseumawe (Indonesia) (r = 0.609, P < 0.05) showed moderate positive correlation to the condition index. During the 16 month sampling period, four reproductive cycles were observed: each from three to six months. The process of releasing gametes is termed dribble spawning, and is the same in all populations. The principle component analysis (PCA) indicated that A. granosa reproduction was affected by interaction between internal physiological factors and indigenous environmental factors. In all sampling areas, phytoplankton density played a key role in the reproductive cycle in A. granosa. Information on the reproductive biology of this species is essential for species management and to improve the sustainability practices of the fisheries industry. These findings will provide basic information on the biology of the blood cockle A. granosa for stock management in the region.     

Vertical distribution of giant jellyfish, <Emphasis Type="Italic">Nemopilema nomurai</Emphasis> using acoustics and optics

Nemopilema nomurai jellyfish, which are believed to complete their development in the East China Sea, have started migrating into the Yellow Sea in recent years. We obtained biomass estimates of this species in the Yellow Sea using bottom trawl fishing gear and sighting surveys over a 5-year period. These methods are effective for obtaining N. nomurai jellyfish density estimates and information about the community distribution near the bottom or surface of the sea. To verify the vertical distributions of giant jellyfish between, we used hydroacoustic equipment, including an optical stereo camera system attached to a towed sledge and an echo counting method with scientific echosounder system. Acoustic and optical data were collected while the vessel moved at 3 knots, from which the distribution and density of N. nomurai jellyfish were analyzed. Subsequently, the camera system was towed from a 7 m mean depth to sea level, with the detection range of the acoustic system extending from an 8 m depth to the bottom surface. The optical and acoustic methods indicated the presence of vertical distribution of 0.11³ (inds/m³) and 0.064 (inds/m3), respectively. However, the vertical distribution indicated that around 93% of individuals occurred at a depth range of 10–40 m; thus, a 2.4-fold greater density was estimated by acoustic echo counting compared to the optical method.     

Feeding,egg production,and respiration rate of pteropods <Emphasis Type="Italic">Limacina</Emphasis> in Arctic seas

The feeding, egg production, and respiration rate of the dominant pteropod Limacina helicina have been studied in Russia’s Arctic seas. The sinking rates of fecal pellets and dead individuals have been measured to estimate their role in vertical carbon flux. As has been shown, the rate of ecophysiological processes taking place in the pteropods is higher than that of copepods, the main consumers of phytoplankton. The gut pigment content in Limacina (3084 ng ind^–1 as a maximum) was two orders of magnitude higher than in copepods. The egg production rate in Limacina even without feeding reached 4000 eggs ind^–1 versus 350–450 egg ind^–1 typical of the dominant copepods even with excess food. A close correlation between the pteropod feeding rate and individual body weight was observed for Limacina rather than a correlation with food concentration. The experimentally estimated sinking rate of Limacina fecal pellets was 270 m day^–1, higher than for most copepods. The sinking rate of dead pteropods reaches 2000 m day^–1. According to the literature, discarded mucous feeding nets sink at a rate of 80 to 1080 m day^–1. Evidently, pteropods play a significant role in biogeochemical cycles by accelerating sedimentation. High rates of all studied processes suggest that Limacina are an important component of plankton communities and play the most important role in trophodynamics at sites of their accumulation.     

Physiological and biochemical responses of <Emphasis Type="Italic">Prorocentrum minimum</Emphasis> to high light stress

Prorocentrum minimum is a common bloomforming photosynthetic dinoflagellate found along the southern coast of Korea. To investigate the adaptive responses of P. minimum to high light stress, we measured growth rate, and generation of reactive oxidative species (ROS), superoxide dismutase (SOD), catalase (CAT), and malondialdehyde (MDA) in cultures exposed to normal (NL) and high light levels (HL). The results showed that HL (800 μmol m^?2 s^?1) inhibited growth of P. minimum, with maximal inhibition after 7–9 days. HL also increased the amount of ROS and MDA, suggesting that HL stress leads to oxidative damage and lipid peroxidation in this species. Under HL, we first detected superoxide on day 4 and H₂O₂ on day 5. We also detected SOD activity on day 5 and CAT activity on day 6. The level of lipid peroxidation, an indicator of cell death, was high on day 8. Addition of diphenyleneiodonium (DPI), an NAD(P)H inhibitor, decreased the levels of superoxide generation and lipid peroxidation. Our results indicate that the production of ROS which results from HL stress in P. minimum also induces antioxidative enzymes that counteract oxidative damage and allow P. minimum to survive.     

Age determination and growth rate of <Emphasis Type="Italic">Mactra chinensis</Emphasis> (Bivalvia: Mactridae) by external rings and chondrophore growth bands

Age, growth and mortality of Mactra chinensis were investigated during the period from October 2012 to September 2013 in Busan, South Korea. The monthly variation of the marginal index (MI) of the shell and chondrophore showed that the ring of this species was formed once a year during July. We estimated the age of M. chinensis by reading the external rings on the shell and the growth bands of the chondrophore to compare growth parameters between the two growth characters. The age of this species ranged from 0 to 8 years (shell-based age reading) and from 0 to 10 years (chondrophore-based age reading). Based on external rings and growth bands of chondrophore for the same period, the von Bertalanffy growth functions were expressed by the equation, L _t = 101.53[1-exp {-0.15(t + 0.75)}] and L _t = 90.03[1-exp {-0.20(t + 0.50)}], respectively. The likelihood test showed that there was a significant difference in L _∞ (P < 0.001), K (P < 0.001), to (P < 0.001) estimated from non-linear regression between the two growth characters.     

<Emphasis Type="Italic">S</Emphasis>-wave velocity structure and tectonic implications of the northwestern sub-basin and Macclesfield of the South China Sea

Based on the optimum P-wave model, the S-wave velocity structure of a wide angle seismic profile (OBS2006-1), across the northwestern sub-basin (NWSB) and the Macclesfield, is simulated by a 2-D ray-tracing method. The results indicate the S-wave velocities in the upper and lower crust of the NWSB are 3.2–3.6 km/s and 3.6–4.0 km/s, with Vp/Vs ratios of 1.82–1.88 and 1.74–1.82, respectively, which reflect typical oceanic crust characteristics. The S-wave velocity in the upper crust of the NWSB is a little higher in the NNW segment than that in the SSE segment, while the lateral variation of Vp/Vs ratio is in the opposite. We suggest that the NWSB might have experienced asymmetrical magma flows during sea floor spreading, which may have blurred the magnetic anomaly lineation. The comparison of S-wave velocities along the northern margin of the SCS shows that the west section is different from the east section, and the northwestern margin has a non-volcanic crust structure. The S-wave structures and P-wave velocity models along the northern margin, Macclesfield and Reed Bank show that the Macclesfield might have a conjugate relationship with the Reed Bank.     

Morphological identification of <Emphasis Type="Italic">Alexandrium</Emphasis> species (Dinophyceae) from Jinhae-Masan Bay,Korea

Outbreaks of paralytic shellfish poisoning (PSP) and dense blooms caused by Alexandrium species in Jinhae-Masan Bay, Korea have been nearly annual events for many years. However, excluding some Alexandrium species responsible for PSP, there are no critical reports on the morphology of Alexandrium species in this bay. To identify the Alexandrium species based on detailed morphological features, vegetative cells collected water samples and established by the incubation of resting cysts isolated from sediment trap samples were analyzed. Four species of Alexandrium were identified: Alexandrium affine, A. fundyense, A. catenella, and A. insuetum. Morphological features of these species were basically consistent with those outlined in previous studies. However, the ventral pore and the connecting pore on the sulcal plate, which have been accepted as diagnostic characteristics for the identification of A. fundyense and A. catenella, need to be reevaluated, indicating that useful morphological features for identifying these two species should be recommended to avoid confusion in the classification of species in genus Alexandrium.     

Spatial Distribution and Seasonal Dynamics of the Chlorophyll <Emphasis Type="Italic">a</Emphasis> Concentration in the Sea of Azov Based on MERIS Images

The chlorophyll a concentration (Cchl a) in the Sea of Azov is estimated by the two-band NIR-red algorithm [34] from MERIS images for 2002–2012. The sea-truth spectrophotometric measurements and MERIS remote estimates of Cchl a are compared. The monthly average Cchl a values are mapped from MERIS data for its lifetime for the first time. The features of the spatiotemporal distribution of Cchl a are ascertained. Differences between the seasonal dynamics of Cchl a in the Sea of Azov according to the literature data and the dynamics derived from MERIS data are found, namely: the summer–autumn phytoplankton growth period is longer than the spring period and is characterized by higher Cchl a values throughout the water area.