Short-term physical and biological variability in the shelf-slope region of the NW mediterranean during the spring transition period

The present paper reports on temporalmesoscale (weeks) changes in physical and biological coupling in the cross-frontal area off the coast of Catalonia in Spain (NW Mediterranean) during the spring transition period. The effect of short-term physical variability on the spatio-temporal heterogeneity of phytoplankton biomass and in the area of overlap of the larvae of fish species dwelling on the shelf and slope is discussed. Our results indicate that the region off the Catalan coast is a dynamically active area during the spring transition period. Short-term spatio-temporal variability in the frontal system brought about significant changes in the extension of shelf and slope waters, giving rise to major changes in the spatial distribution patterns of chlorophyll and fish larvae. The relationship between integrated chlorophyll, surface chlorophyll and DCM (Deep Chlorophyll Maximum) showed important variability in a short time period. The area of overlap of the larvae of shelf and slope fish species was broad when the front was located offshore, compared to nearly complete segregation of shelf and oceanic fish larvae when the front moved inshore near the coast.     

Distribution and controlling factors of phytoplankton assemblages in a semi-enclosed bay during spring and summer

The phytoplankton assemblages' patterns and their correlation to environmental factors were studied in Bohai Bay during spring and summer. Two zones, the northern (NWA) and southern (SWA) water area, were identified by cluster analysis based on their physical and chemical properties. Principal component analysis (PCA) showed that more phytoplankton species was found in the SWA with low nutrient concentration, while high phytoplankton abundance occurred in the NWA with high nutrient concentration. The seasonal variability in phytoplankton can be explained by water temperature, nutrient, and hydrodynamic conditions (includes mixing during spring and stratification during summer). Results of redundancy analysis (RDA) showed that silicate (SiO(4)) and soluble reactive phosphorus (SRP) were the most important environmental factors influencing the phytoplankton distribution during spring and summer, respectively. Hydrodynamics condition plays a key role in controlling variation of the environmental factors, which determined phytoplankton distribution in Bohai Bay.     

Oceanographic and meteorological forcing of the pelagic ecosystem on the Gulf of Cadiz shelf (SW Iberian Peninsula)

The spatial and temporal distribution of physical, chemical and biological variables of the NE continental shelf of the Gulf of Cadiz were analyzed monthly during almost three annual cycles. This analysis was performed with the aim of deriving the main forcing factors controlling variability at inter-annual, seasonal and short-time scales. Meteorological forcing related to heavy episodes of rainfall that affected river discharges and the wind regime, controlled both the currents along the shelf together and the nutrient concentrations of the surface waters. Meteorological forcing in turn determined the subsequent development and maintenance of phytoplankton blooms. Superimposed on the seasonal cycle typical of temperate latitudes, the inputs of continental nutrients mainly from the Guadalquivir River, along with episodes of upwelling favored by the predominance of westerly winds triggered phytoplankton growth on the shelf, highlighting the markedly relevant role of this large estuary in the control of the biological activity on the shelf.     

Controls on the interannual variability of hypoxia in a subtropical embayment and its adjacent waters in the Guangdong coastal upwelling system,northern South China Sea

Coastal embayments located downwind of large rivers under an upwelling-favorable wind are prone to develop low-oxygen or hypoxic conditions in their bottom water. One such embayment is Mirs Bay, off the Guangdong coast, which is affected by upwelling and the Pearl River Estuary (PRE) plume during summer. The relative importance of physical and biochemical processes on the interannual variability of hypoxia in Mirs Bay and its adjacent waters was investigated using statistical analyses of monthly hydrographic and water quality monitoring data from 2001 to 2015. The results reveal that the southwesterly wind duration and the PRE river discharge together explain 49% of the interannual variability in the size of the hypoxic area, whereas inclusion of the nutrient concentrations inside Mirs Bay and phytoplankton on the shelf explains 75% of the interannual variability in the size of the hypoxic area. This finding suggests that the interannual variability of hypoxia in Mirs Bay is regulated by coupled physical and biochemical processes. Increase of the hypoxic area under a longer-lasting southwesterly wind is caused by increased stratification, extended bottom water residence time, and onshore transport of a low-oxygen water mass induced by stable upwelling. In contrast, a reduction in the size of the hypoxic area may be attributed to a decrease in the surface water residence time of the particulate organic matter outside Mirs Bay due to increased discharge from the PRE. The results also show that the effects of allochthonous particulate organic matter outside Mirs Bay on bottom hypoxia cannot be neglected.     

Yearly succession of the phytoplankton in an ice-free pond in central Finland

Seasonal succession of the phytoplankton was studied with shortinterval sampling in an eutrophic pond warmed during winter months by a small thermal power plant in central Finland since Octover 1978. Simultaneously with phytoplankton, also physical and chemical properties of water and zooplankton were studied.     

The generation of phytoplankton patchiness by mesoscale current patterns

 Elken et al. (1994) suggested that phytoplankton patchiness can be generated by mesoscale eddies in light-limited, nutrient-replete environments. This hypothesis is explored using two ecological models of different physical complexity. The model results support the idea that the coupling of mesoscale eddy circulation and phytoplankton growth leads to differential growth rates and thus generates variability in phytoplankton distributions. The specific circulation of a cyclonic eddy isolates a phytoplankton population in its core. Due to the reduced vertical mixing, a higher growth rate is supported in the core, and phytoplankton concentrations increase compared to the surrounding environment. A one-dimensional model is used to explore the hypothesis in general and to perform sensitivity studies. A more realistic simulation uses a coupled three- dimensional model for the western Baltic Sea. Starting from vertically and horizontally homogeneous distributions for nutrients and plankton, the models generate patchiness due to the proposed mechanism. The described mechanism may apply for other mesoscale variable environments during light-limited growth periods as well, e.g., the frontal region of the Southern Ocean. Received: 31 March 2001 / Accepted: 31 August 2001     

Regional and interannual variability of ecosystem dynamics in the Southern Ocean

To investigate regional and interannual variability of the ecosystem in the Southern Ocean, a coupled circumpolar ice–ocean–plankton model has been developed. The ice–ocean component (known as BRIOS-2) is based on a modified version of the s-coordinate primitive equation model (SPEM) coupled to a dynamic–thermodynamic sea-ice model. The biological model (BIMAP) comprises two biogeochemical cycles – silica and nitrogen – and a prognostic iron compartment to include possible effects of micronutrient limitation. Simulations with the coupled ice–ocean–plankton model indicate that the physical–biological interaction is not limited to the effect of a varying surface mixed-layer depth. In the Pacific sector, large anomalies in winter mixed-layer depth cause an increased iron supply and enhance primary production and plankton biomass in the following summer, whereas in the Atlantic sector variability in primary production is caused mainly by fluctuations of oceanic upwelling. Thus, the Antarctic Circumpolar Wave (ACW) induces regional oscillations of phytoplankton biomass in both sectors, but not a propagating signal. Furthermore, interannual variability in plankton biomass and primary production is strong in the Coastal and Continental Shelf Zone and the Seasonal Ice Zone around the Antarctic continent. Interannual variability induced by the ACW has large effects on the regional scale, but the associated variability in biogenic carbon fluxes is small compared to the long-term carbon sequestration of the Southern Ocean.     

Phenological Responses to ENSO in the Global Oceans

Phenology relates to the study of timing of periodic events in the life cycle of plants or animals as influenced by environmental conditions and climatic forcing. Phenological metrics provide information essential to quantify variations in the life cycle of these organisms. The metrics also allow us to estimate the speed at which living organisms respond to environmental changes. At the surface of the oceans, microscopic plant cells, so-called phytoplankton, grow and sometimes form blooms, with concentrations reaching up to 100 million cells per litre and extending over many square kilometres. These blooms can have a huge collective impact on ocean colour, because they contain chlorophyll and other auxiliary pigments, making them visible from space. Phytoplankton populations have a high turnover rate and can respond within hours to days to environmental perturbations. This makes them ideal indicators to study the first-level biological response to environmental changes. In the Earth’s climate system, the El Niño–Southern Oscillation (ENSO) dominates large-scale inter-annual variations in environmental conditions. It serves as a natural experiment to study and understand how phytoplankton in the ocean (and hence the organisms at higher trophic levels) respond to climate variability. Here, the ENSO influence on phytoplankton is estimated through variations in chlorophyll concentration, primary production and timings of initiation, peak, termination and duration of the growing period. The phenological variabilities are used to characterise phytoplankton responses to changes in some physical variables: sea surface temperature, sea surface height and wind. It is reported that in oceanic regions experiencing high annual variations in the solar cycle, such as in high latitudes, the influence of ENSO may be readily measured using annual mean anomalies of physical variables. In contrast, in oceanic regions where ENSO modulates a climate system characterised by a seasonal reversal of the wind forcing, such as the monsoon system in the Indian Ocean, phenology-based mean anomalies of physical variables help refine evaluation of the mechanisms driving the biological responses and provide a more comprehensive understanding of the integrated processes.     

Spatio-temporal variability of phytoplankton assemblages in the Pearl River estuary, with special reference to the influence of turbidity and temperature

The Pearl River Estuary is among the largest estuaries in the subtropical areas of the world. Along the salinity and turbidity gradient between the freshwater reach of the Pearl River and the marine water of the South China Sea, the spatial and temporal composition and abundance of phytoplankton was examined in relation to physic-chemical variables during the dry and wet seasons of 2009. Water samples for phytoplankton and environmental parameters were collected from 18 stations during two seasons along a transect from upper estuary to estuarine and marine sectors. A total of 162 species belonging to 7 phyla were identified, with diatoms dominated in both seasons while dinoflagellates proliferated in autumn. Two main clusters and three sub-clades under each main cluster corresponding to seasons and water sectors were defined with multivariate analysis (cluster and nMDS). Based on the species composition and abundance of phytoplankton, both seasonal and spatial variability were observed at a significant level (ANOSIM: season effect, R=0.896, P<0.01; station effect, R=0.463, P<0.01). The correlation analysis between biotic and abiotic variables indicated that instead of the “proverbial” anthropogenic nutrients loading and salinity gradient, the best 2-variable combination (temperature and turbidity) showed a significant effect on the pattern of phytoplankton assemblages (ρ_w=0.49, BIOENV analysis) between wet and dry seasons in the Pearl River Estuary. This result suggests that physical disturbance either natural or manmade is a more important factor in regulating the phytoplankton community structure within the hydrologically distinct zone of estuaries.     

Satellite observations of phytoplankton variability during an upwelling event

A sequence of satellite images of near-surface phytoplankton pigment concentrations and sea surface temperature together with concurrent surface measurements are used to study an upwelling event during the Coastal Ocean Dynamics Experiment off northern California. These data sets show a high degree of temporal and spatial variability during this episode. Recurrent patterns in this variability give insight into the dynamics of coastal upwelling and its effects on biological distributions. Simple models of coastal upwelling cannot explain the observed phenomena in the CODE region. Satellite estimates of phytoplankton growth rates were about 0.8 day⁻¹ near persistent upwelling centers.     

Nutrient mediated stress on the marine communities of a coastal lagoon (Puerto Galera, Philippines)

Puerto Galera Bay is a coastal lagoon with a variety of marine habitats and high species diversity. It is an area in the Phillippines where the growing influence of human activities is affecting the quality of its marine resources. This study examined the distribution and behaviour of nutrients and the physical hydrography of Puerto Galera Bay and determined how its physico-chemical nature affected the condition of biotic components in the bay. The relative importance of the nitrogen and phosphorus signals were used as indicators to implicate the influence of sewage and run-off into the bay. A nutrient pool accumulated in the bay as a result of low flushing rates. The interaction of hydrodynamic forcing with the biota have implications on the phytoplankton production and coral communities in the area.     

Seasonal and interannual variation of the phytoplankton and copepod dynamics in Liverpool Bay

The seasonal and interannual variability in the phytoplankton community in Liverpool Bay between 2003 and 2009 has been examined using results from high frequency, in situ measurements combined with discrete samples collected at one location in the bay. The spring phytoplankton bloom (up to 29.4 mg chlorophyll m⁻³) is an annual feature at the study site and its timing may vary by up to 50 days between years. The variability in the underwater light climate and turbulent mixing are identified as key factors controlling the timing of phytoplankton blooms. Modelled average annual gross and net production are estimated to be 223 and 56 g C m⁻² year⁻¹, respectively. Light microscope counts showed that the phytoplankton community is dominated by diatoms, with dinoflagellates appearing annually for short periods of time between July and October. The zooplankton community at the study site is dominated by copepods and use of a fine mesh (80 μm) resulted in higher abundances of copepods determined (up to 2.5 × 10⁶ ind. m⁻²) than has previously reported for this location. There is a strong seasonal cycle in copepod biomass and copepods greater than 270 μm contribute less than 10% of the total biomass. Seasonal trends in copepod biomass lag those in the phytoplankton community with a delay of 3 to 4 months between the maximum phytoplankton biomass and the maximum copepod biomass. Grazing by copepods exceeds net primary production at the site and indicates that an additional advective supply of carbon is required to support the copepod community.     

Long-term perspective on the relationship between phytoplankton and nutrient concentrations in a southeastern Australian estuary

Sixteen years (1997–2013) of physicochemical, nutrient and phytoplankton biomass (Chlorophyll-a (Chl-a)) data and a decade (2003-2013) of phytoplankton composition and abundance data were analyzed to assess how the algal community in a temperate southeastern Australian estuary has responded to decreased chronic point source nitrogen loading following effluent treatment upgrade works in 2003. Nitrogen concentrations were significantly lower (P < 0.05) following enhanced effluent treatment and Chl-a levels decreased (P < 0.05) during the warmer months. Temperature and nutrient concentrations significantly influenced temporal changes of Chl-a (explaining 55% of variability), while salinity, temperature, pH and nutrient concentrations influenced phytoplankton abundance and composition (25% explained). Harmful Algal Bloom (HAB) dynamics differed between sites likely influenced by physical attributes of the estuary. This study demonstrates that enhanced effluent treatment can significantly decrease chronic point source nitrogen loading and that Chl-a concentrations can be lowered during the warmer months when the risk of blooms and HABs is greatest.     

Phytoplankton distributions and their relationship with the environment in the Changjiang Estuary, China

This study was carried out in the Changjiang Estuary from 19 to 26 May 2003. Based on the data collected from 29 stations, including two anchor stations, phytoplankton taxonomic composition, abundance, diurnal variability and spatial distribution were examined. Eighty-seven species, including 54 species of diatoms and 16 red tide causative species, were identified. Average diversity index (H') and evenness (J) values were 1.04 and 0.40, respectively. A bloom in abundance of certain phytoplankton species, especially Prorocentrum dentatum and Skeletonema costatum, was thought to be the cause of the low diversity index and evenness values. Total phytoplankton abundance averaged 6.75 x 10(5)cells l(-1), and was much higher than previous investigation carried out in the same month in 1986. Abundance increased seaward showing a distinct spatial difference, and the dominant species varied with salinity. Correlation between phosphorus and abundance further supported the former conclusion that phosphorus is the controlling factor in phytoplankton growth in the Changjiang Estuary where light is not limiting. Based on the relationship between DO, pH and abundance, it is likely that the bloom was caused by rapid in situ growth of phytoplankton with high nutrients and sufficient light. The data also indicated that the duration of the bloom was not long and 相似文献   

Coastal thin layer dynamics: Consequences to biology and optics

Thin layers are fine-scale structures with high concentrations of organisms or particles occurring over very small vertical scales (a few meters or less), but with large horizontal scales, often extending for many kilometers. Because of their small vertical scales, thin layers are traditionally under sampled, but when proper measurement techniques are used, thin layers have been found to be ubiquitous in stratified oceans. A multi-investigator, interdisciplinary study of thin layers was sponsored by the US Office of Naval Research under a research initiative termed: Layered Organization in the Coastal Ocean (LOCO). The goal of this program was to understand the properties of coastal thin layers and the interacting physical, chemical, biological and optical processes responsible for their formation, maintenance and dissipation. As part of this program, fine-scale vertical profiles (cm resolution) of biological, physical and chemical properties were made hourly over periods spanning 1–3 weeks during three summers in Monterey Bay, California USA. The vertical profiles were made using arrays of moored autonomous profilers. In total, these profilers made ~2000 individual vertical profiles and provided a unique view of phytoplankton thin layer spatial-temporal dynamics. The autonomous profiler data were supplemented with high-resolution ship-based profiling and discrete water sampling for identifications of organisms.Persistent phytoplankton thin layers were observed during each year in Monterey Bay; however, each year had very different biological and physical dynamics. During 2002, thin layers were dominated by the non-motile and potentially toxic diatom genus Pseudo-nitzschia; during 2005, thin layers were dominated by the highly motile dinoflagellate species Akashiwo sanguinea; and during 2006, a more complex phytoplankton assemblage was present, but thin layers of the toxic dinoflagellate species Alexandrium catenella frequently occurred. The variability in the vertical location of thin layers in 2002 was primarily controlled by physics, while behavior, e.g. diurnal vertical migration patterns and daytime near-surface aggregations, primarily controlled the location of thin layers in 2005 and 2006. In 2002, phytoplankton thin layers were present in the water column 87% of the time, in 2005, 56% of the time and in 2006, 21% of the time. The median integrated chlorophyll concentration within the thin layers was found to be approximately 47% of the total water column chlorophyll in 2002, 41% in 2005 and 33% in 2006. Additional results in this study describe the mechanisms driving the spatial-temporal dynamics of these phytoplankton thin layers with special emphasis on diel patterns and the specific relationships that thin layers have to biological and physical processes and water column optics.     

Long-term changes in physical and chemical conditions of nutrient-poor lakes along a latitudinal gradient: is there a coherent phytoplankton community response?

To evaluate climate and atmospheric deposition induced physical and water chemical changes and their effects on phytoplankton communities, we used complete time series (14 years, monthly measurements during the growing season) of 18 physical and chemical variables and phytoplankton data from 13 nutrient-poor Swedish reference lakes along a latitudinal gradient. We found numerous strong significant changes over time that were most coherent among lakes for sulfate concentrations, conductivity, calcium, magnesium, chloride, potassium, water color, surface water temperature and the intensity of thermal stratification. Despite these pronounced coherent physical and water chemical changes over Sweden, the phytoplankton biomass and species richness of six phytoplankton groups, measured at the same time as the water chemical variables, showed only few and weak significant changes over time. The only coherent significant change over Sweden, occurring in seven lakes, was observed in the species richness of chlorophytes. The number of chlorophyte taxa significantly declined over Sweden. Using a partial least square model for each lake, we attributed the decline primarily to an increase in water temperatures and water color, which were among the most important variables for the model performance of each lake. All other taxonomic groups were driven primarily by non-coherent changes in nutrient concentrations, pH and probably also non-coherent grazing pressure. We concluded that coherent phytoplankton responses can only be achieved for taxonomic groups that are driven primarily by coherent physical/chemical changes. According to our study, chlorophytes belong to such a group, making them possible global change indicators. Our findings give new insights into global change effects on different phytoplankton taxonomic groups in nutrient-poor lakes.     

Phytoplankton pigments and epifluorescence microscopy as tools for ecological status assessment in coastal and estuarine waters, within the Water Framework Directive

Inverted microscopy is widespread employed for the analysis of phytoplankton composition within water quality monitoring networks. However, the analysis at the lowest taxonomical level is not always required for ecological status assessment. In addition, inverted microscopy can underestimate the small phytoplankton, and not always distinguish photoautotrophic from heterotrophic cells. In this study, as alternative tools, epifluorescence microscopy and High Performance Liquid Chromatography (HPLC) were employed to characterize phytoplankton communities within waters of different trophic condition. Epifluorescence microscopy confirmed its effectiveness to count the small phytoplankton. Furthermore, significant correlations between nutrients of anthropogenic origin and nanoplankton abundances were found. However, this technique resulted very time-consuming. HPLC together with the CHEMTAX program was more appropriate than inverted microscopy, in terms of cost-effectiveness. Also, the main variability patterns observed in the phytoplankton community structure by HPLC coincided with previous findings in the study area. Nevertheless, a rapid screening at the inverted microscope is recommended.     

Calibration of a coupled biological-physical model for prediction in a coastal inlet

We describe a numerical forecast system designed for prediction of physical and biological dynamics of a coastal inlet. It is based on a coastal ocean observatory that was located at Lunenburg Bay, Nova Scotia, Canada. Biological, chemical, optical, and physical measurements were collected from instrumented moorings, weekly sampling and detailed surveys from 2002 through 2007. Here we present a framework for calibration and evaluation of an ecosystem model using data from the summer of 2007. A three-dimensional hydrodynamic model was coupled to a simple biological (Nutrients-Phytoplankton-Detritus) model; a simple model was used so results could be compared directly to observed biological and chemical variables using skill scores as a first step toward data-assimilation modeling. As a complement to this analysis, variability of model output, e.g., the nutrient limitation term, was examined to understand the modeled biological response to the simulated physical environment. Skill scores based on variances in observed and simulated time-series of biological components were also investigated. Coastal upwelling/downwelling simulated through this model has been found to increase modeled biological activity in the bay. Also model skill in reproducing the observed patterns in nutrients and phytoplankton has been increased due to the restoring conditions for biology set up at the open ocean boundaries of the bay.     

Patterns of asynchrony for phytoplankton fluctuations from reservoir mainstream to a tributary bay in a giant dendritic reservoir (Three Gorges Reservoir, China)

Seasonal fluctuations of phytoplankton have often been regarded as one of the important cyclic events in aquatic ecosystems, and have even been emphasized as an important sign of regional climatic variability in limnology. However, few attempts have been made to examine synchrony for phytoplankton fluctuations among different habitats in a single reservoir system. The present study employed Spearman rank correlation analysis and the Mantel test to assess levels of synchrony for phytoplankton abundance and taxonomic composition from reservoir mainstream to a tributary bay (Xiangxi Bay) in a giant dendritic reservoir, China (Three Gorges Reservoir, TGR). At the selected scale, asynchronous patterns of phytoplankton were found when looking at total abundance and taxonomic composition, suggesting that regional drivers were not strong enough to synchronize phytoplankton fluctuations, and local regulators were predominant. As a riverine system, the mainstream of TGR had high levels of algal synchrony, while asynchronous patterns of phytoplankton were detected within Xiangxi Bay, which is characterized as a lacustrine system. The present study further confirmed that external hydrological disturbances strongly homogenize habitat conditions and synchronize phytoplankton fluctuations within the mainstream, while spatial divergence of phytoplankton succession depend on local habitat conditions within Xiangxi Bay. Moreover, low synchrony of phytoplankton between the mainstream and Xiangxi Bay is probably caused by spatial divergence of phytoplankton succession within Xiangxi Bay and the lack of succession in the rapidly flushed mainstream. Independently of these mechanisms possibly explaining phytoplankton fluctuations, the present study has also an applied perspective to the improvement of a long-term observation program in which phytoplankton trends at the mainstream scale could be compiled from the data set in a single site, while a set of sampling sites should be required at the Xiangxi Bay scale.