On the possibility of mapping living corals to the species level based on their optical signatures

Several methods (Spectral Angle Mapper, first derivatives, spectral clustering) were used to test the possibility of discriminating live corals at the species level by using reflectance spectra obtained by close range underwater remote sensing. The Spectral Angle Mapper used with an in situ spectral library of 73 coral colonies recognised all corals correctly in an artificial remote sensing image created from the same coral spectra. The results did not change when “grey” noise was added to each pixel in the artificial image or when the artificial image was made from reflectance spectra modelled through a 5-m water column. The results showed that the within-species variability in optical properties of a set of four coral species, for which at least three different specimens were measured, was as high as between-species variability. Thus, it is highly unlikely that hard corals can be discriminated at a species level by means of remote sensing. Cluster analysis showed that it is difficult to recognise corals also at the genus level (Acropora vs. non-Acropora) based on their reflectance spectra. However, visual inspection of the coral spectra and clustering analysis suggest that it is possible to separate three main optical types of corals: green, blue, and brown corals. This may form the basis for an optical classification of corals that is more suited for remote sensing than traditional taxonomy.     

环境因子对中肋骨条藻碳水化合物、氨基酸和蛋白质含量的影响

在实验室条件下,研究了氮磷比、温度、光照强度等环境因子对中肋骨条藻细胞碳水化合物,氨基酸、蛋白质含量的影响。结果表明：当介质Ｎ／Ｐ为１０：１时生化组成含量比３０：１高;在２８℃时,其生化含量高;高光照强度下藻生化组成含量比低光照大。     

Searching for sustainability in aquaculture: An investigation into the economic prospects for an integrated salmon–mussel production system

The pollution effects of cage aquaculture represent an external cost to society, and the challenge for environmental economists has been to estimate the magnitude of these costs and to suggest ways in which they can be mitigated or ‘internalised’. One possible mitigation strategy involves the development of integrated production systems based on polyculture, and this paper examines the financial viability of such a system that integrates the farming of salmon and mussels. The results demonstrate the commercial potential of an integrated salmon–mussel production system under present market conditions, but highlight the critical role played by future price trends.     

The Baltic Sea environment and the European Union: Analysis of governance barriers

The EU enlargement brought the Baltic Sea into the sphere of EU environmental policymaking, making the sea, with the exception of Russia, an EU inland sea. Yet, the state of the Baltic Sea environment is deteriorating at an alarming pace. This paper describes the evolution of the EU governance of the Baltic Sea environment, focussing on governance barriers. The findings demonstrate how the choice of analytical lens influences the construction of governance barriers and the respective intervention strategies. Such understanding can help policy practitioners in their search for successful measures to improve the governance situation in the Baltic Sea region.     

Absence of an effect of freshwater input on the stable isotope and fatty acid signatures of intertidal filter-feeders

Freshwater input is known to have the potential to influence marine pelagic and benthic communities through the export of nutrients, sediments and detritus. The increase in nutrients of riverine origin in coastal environments can enhance primary production in coastal areas, supporting a diverse and rich fauna. However, it is not clear how and to what extent these freshwater inputs influence marine populations. We investigated the potential effects of freshwater input on the diets of intertidal benthic organisms in situ on the east coast of South Africa, analysing their δ¹³C and δ¹⁵N stable isotope and fatty acid content. Specifically, we investigated the dietary regime of three barnacle and one mussel species in relation to their proximity to the mouths of large rivers. Strong dissimilarities among species were recorded with both techniques; however, no significant effect of freshwater input was observed for any of them. There are several possible explanations for these results, including rapid dilution, with fresh water near the river mouth being thoroughly mixed with seawater, resulting in a riverine influence being too weak to be detectable in the signatures of benthic populations. Our results contrast with a previous study conducted in the same area, where it was suggested that demersal organisms relied on freshwater-derived organic matter. Our study, however, showed no freshwater effect either within a few metres or tens of kilometres from the nearest large river mouths, supporting the notion that freshwater input does not play an important role for the benthic intertidal community in the ecosystems studied. Given that freshwater input is likely to diminish in the future, because of increased human abstraction of water, any potential effects of freshwater input on these marine populations are likely to be further reduced.     

Environmental analysis of the Norwegian fishery and aquaculture industry—A preliminary study focusing on farmed salmon

This article addresses the present status of seafood-oriented environmental methods and analyses, and pinpoints areas for further development. A recent study of the CO₂ emissions associated with the production of farmed salmon in Norway, following the life cycle from hatching to consumption, is presented. The study was initiated due to the increased focus on environmental impacts from food production among consumer organizations, retailers, and authorities. In general, several methods are being currently applied to measure environmental performance. Unfortunately, different methods provide quite different results. An additional challenge is that most of these methods were originally developed for land-based production. If assumptions about the performance of the seafood industry are established on the basis of incorrect information, consequences for both the management and the market level may not be desirable.     

Photosynthate allocation in a temperate sea over an annual cycle: the relationship between protein synthesis and phytoplankton physiological state

The seasonal and vertical variations in the patterns of photosynthate allocation into biomolecules by natural phytoplankton assemblages were determined, together with their species composition, in a coastal station of the central Cantabrian Sea (southern Bay of Biscay). Chlorophyll-a concentration ranged from values below 20 mg m⁻² in winter to values above 80 mg m⁻² during spring and during an upwelling event in summer. Low primary production rates (<300 mgC m⁻² d^-1) were measured during winter and during summer stratification periods. The rate of C fixation during summer upwelling conditions exceeded 3500 mgC m⁻² d⁻¹. In terms of photosynthate partitioning, proteins were the dominant fraction, as they typically accounted for >30% of total photo-assimilated C, with polysaccharides and low molecular weight metabolites showing incorporation percentages around 10–30%. Relative C incorporation into lipids was generally <15%. Recurrent patterns of vertical variability in photosynthate partitioning were observed: the relative synthesis of proteins increased toward the bottom of the euphotic zone, whereas the relative C incorporation into polysaccharides and lipids tended to be higher near the surface. When primary production decreased, the synthesis of proteins was maintained more than that of other molecules. Throughout the year, the relative synthesis of proteins was inversely correlated with phytoplankton biomass, production and growth rate. The conservation of protein synthesis under growth-limiting conditions and the enhancement of lipid and polysaccharide synthesis when irradiance is high seem to constitute general patterns of photosynthate partitioning in marine phytoplankton. In our study, these patterns represented metabolic strategies of phytoplankton in response to changing environmental factors, rather than the effect of variations in the species composition of the community.     

Marine governance in an industrialised ocean: A case study of the emerging marine renewable energy industry

The world׳s oceans are currently undergoing an unprecedented period of industrialisation, made possible by advances in technology and driven by our growing need for food, energy and resources. This is placing the oceans are under intense pressure, and the ability of existing marine governance frameworks to sustainably manage the marine environment is increasingly being called into question. Emerging industries are challenging all aspects of these frameworks, raising questions regarding ownership and rights of the sea and its resources, management of environmental impacts, and management of ocean space. This paper uses the emerging marine renewable energy (MRE) industry, particularly in the United Kingdom (UK), as a case study to introduce and explore some of the key challenges. The paper concludes that the challenges are likely to be extensive and argues for development of a comprehensive legal research agenda to advance both MRE technologies and marine governance frameworks.     

The origin of the suspended particulate matter in the seagrass meadow of tropical waters, an evidence of the stable isotope signatures

Suspended particulate matter (SPM) has been known as an important variable in the organic matter flow of coastal ecosystem. Half of burial carbon in seagrass meadows is contributed by allochthonous sources that compose the SPM such as phytoplankton, seagrass detritus, marine snow aggregates and terrestrially derived particles. Each composition of the SPM contributes different roles and is important to be identified, for instance, the exact contribution of seagrass detritus will be useful for determination of carbon export through the detritus form in seagrass meadows. Here, the SPM of seagrass meadows is studied in Bintan Island and the Selayar Archipelago. The aim of this research is to determine the source origin of the SPM using a stable isotope signature. In order to fulfill this aim, the objectives are defined as: (1) to specify the stable isotope signature (δ¹³C and δ¹⁵N) of the SPM, and (2) to determine the proportional distribution of the SPM''s prospectus sources. The result shows that the possibility of the source origin of the SPM includes a seagrass fraction (Enhalus acoroides and Thalassia hemprichii), terrestrial C4 plant, macroalgae, and terrestrial C3 plant. The SPM lies between the marine- and terrigenous-end members. However, it seems that the SPM is more to be terrigenous-end and allochthonous. According to a Bayesian mixing model, the terrestrial C4 has the highest contribution of the SPM at all sites except Barugaia and Pasi Island in Selayar (i.e., the highest contribution of the SPM is from the detritus of E. acoroides). The second contribution has been contributed by either seagrass detritus (E. acoroides or Th. hemprichii) or terrestrial C3 plant. The finding of this study indicates that there is a strong influence of the terrigenous sources in the SPM of the seagrass meadows.     

无人船系统应用于水库水样离岸采集——以棘洪滩水库为例

水库水质监测是水库水质评价的重要依据,通常需要现场采水样后带回实验室进行检测与分析。然而一些特殊情况下,例如库区无船、情况复杂等,只能获得沿岸水样,导致水质监测结果无法代表水库整体水质质量。本文针对水库的水样离岸采集,基于自研发的无人船系统,设计集成了采水泵,并利用无人船位点跟踪技术,实现了远距离定点遥控采水样功能。在青岛棘洪滩水库,利用该系统,设置了两个采样点(离岸50 m和离岸1300 m),并成功获取了水样。在实验室内,利用分光光度计、离子色谱仪、电感耦合等离子体质谱仪等设备,完成了所采集水样的水质分析。实验结果表明,无人船应用于水库水样离岸采集具有可行性、实用性。     

At loggerheads over international bycatch: Initial effects of a unilaterally imposed bycatch reduction policy

The Magnuson-Stevens Fishery Conservation and Management Act (MSA) is the primary law that codifies marine fisheries management in United States federal waters. The MSA was amended in 2006 with Section 610, an international provision that directs the Secretary of Commerce to unilaterally identify foreign nations engaged in the incidental capture (bycatch) of protected living marine resources (PLMRs) under specific conditions. In 2013 the United States identified Mexico for bycatch of a PLMR – the North Pacific loggerhead turtle – representing the first time a nation has been identified for bycatch under section 610. This paper evaluates the initial effects of the identification on loggerhead bycatch management efforts in Mexico and provides policy recommendations for improving the law and its implementation. In the wake of the unilateral identification, Mexico downplayed and denied the bycatch problem that their agencies had previously accepted and cancelled a bycatch research partnership between their federal fisheries science agency and U.S. researchers. Moreover, fishers invested in bycatch reduction and monitoring programs ceased to participate, jeopardizing their understanding of the problem and their co-development of bycatch solutions. However, the identification and subsequent consultation process ultimately resulted in Mexico implementing federal loggerhead bycatch regulations that are temporarily comparable with relevant U.S. measures. These regulations establish a temporary fisheries reserve (authorized for two years) that includes monitoring of bycatch, a loggerhead bycatch mortality cap, temporal and spatial restrictions on fishing gear and practices, and a closure of all finfish fisheries during the summer of 2016. As a result, turtle bycatch was likely substantially reduced in 2016, but at the cost of artisanal fishers' entire seasonal income. Policy recommendations are made, highlighting the need to: 1) better assess the socioeconomic, political, and environmental consequences associated with using the threat of trade sanctions to compel nations to reduce their bycatch; and 2) facilitate a more consistent consideration of bycatch data across nations such that the current policy does not create a disincentive for other nations to assess or report PLMR bycatch.     

The Canada-Newfoundland Atlantic Accord Implementation Act: Transparency of the environmental management of the offshore oil and gas industry

This paper considers the overall outcome of a “public environmental audit” of the government management of the oil and gas offshore industry in eastern Canada. Five requests for data sets were placed using the Access to Information Act; all five requests were denied by the Canada-Newfoundland Labrador Offshore Petroleum Board. This lack of access to environmental monitoring data significantly hinders the ability of independent scientific inquiry and/or public involvement in the environmental assessment process.     

Marine proteomics: generation of sequence tags for dissolved proteins in seawater using tandem mass spectrometry

Dissolved proteins in seawater samples from the Gulf of Mexico were concentrated using tangential flow ultrafiltration and methanol/chloroform/water precipitation. Following concentration and purification, two different separation methods were employed. In one method, intact proteins were separated by SDS–PAGE and digested enzymatically in-gel. In the second method, the peptides resulting from a solution proteolytic digest of the whole protein pellet mixture were separated by capillary HPLC. In both methods, the final chromatographic separation was coupled on-line with a mass spectrometer using an electrospray interface, and peptide CID spectra were collected using tandem mass spectrometry (MS). De novo sequencing of the peptide tandem mass spectra generated short amino acid sequences (peptide tags) that were used to search databases for protein class and source information. Trends of conserved sequences for two specific classes of proteins were observed: membrane/envelope proteins and enzymes. Similarity searching of peptide tags produced identification of conserved sequences from several protein homologues originating from many different species, including: long chain fatty acyl CoA synthetase, anthranilate synthase, ribulose bisphosphate carboxylase, and luminal binding protein. These results provide new insight into the sources and production mechanisms for dissolved organic matter (DOM), as there is direct evidence for dissolved proteins other than the bacterial outer membrane proteins reported by Tanoue et al. Furthermore, the data presented herein support the idea that physical protection and selective preservation are not mutually exclusive survival mechanisms, but rather these two models are dependent upon one another for explaining the survival of refractory dissolved proteins in seawater.     

Sex-different effects of tributyltin on brain aromatase,estrogen receptor and retinoid X receptor gene expression in rockfish (Sebastiscus marmoratus)

Since the brain plays important roles in reproduction, the brain aromatase (Cyp19b), estrogen receptor (ER), retinoid X receptor (RXR) α and peroxisome proliferator-activated receptor γ were examined in rockfish after TBT exposure (1, 10, and 100 ng L⁻¹). The results showed that the Cyp19b expression was elevated in the male rockfish, while no effect was produced in the females. Inconsistently, serum testosterone and 17β-estradiol showed no change in the males, while an increase of testosterone and a decrease of 17β-estradiol were observed in the females. TBT affected the ER expression in the males depending on the concentrations, however, no change was observed in the females. In addition, TBT elevated the RXRα expression in the males but produced an opposite effect in the females. In conclusion, TBT might have had sex-different effects on the brain Cyp19b, ER and RXR expression in rockfish, indicating a complex endocrine disrupting effect of TBT.     

Increase in Cliona delitrix Infestation of Montastrea cavernosa Heads on an Organically Polluted Portion of the Grand Cayman Fringing Reef

Abstract. A marked increase in the biomass of Cliona delitrix infesting Montastrea cavernosa substrate occurred in a portion of the Grand Cayman fringing reef affected by the discharge of untreated fecal sewage. It is suggested that the six-fold increase in bacteria biomass (both "coliforms" and natural marine bacterioplankton) in reef waters receiving the sewage effluent is linked to a five-fold increase in sponge biomass at the polluted site relative to a control site. The elevated density of C. delitrix biomass signifies a similar increase in the amount of M. cavernosa skeleton that has been eroded by this sponge and reduced to silt-sized sediment. Thus, the proliferation of a bioeroding organism in the sewage-stressed environment has caused a shift in the carbonate balance on the reef.