Ecological effects from the balance between new and recycled nitrogen in Texas coastal waters

Benthic nutrient recycling is a significant source of dissolved nitrogen for south Texas coastal waters in the region of the Corpus Christi Bay estuary. Studies indicate that 90% of the dissolved nitrogen supply for phytoplankton production is derived from sediments in the upper-estuary, whereas benthic regeneration supplies only 33% of the dissolved nitrogen required for primary production outside the barrier island in coastal waters (15 m depth). In the upper-estuary relationships were observed between fluvial flow, water-column dissolved nitrogen, and phytoplankton productivity. In the middle-estuary relationships were observed between sediment recycling rates and water-column dissolved nitrogen. Beyond the barrier island, relationships were observed between fluvial flow and water-column dissolved nitrogen during high flow periods, while benthic regeneration appeared to be the major nutrient source during low flow periods. We suggest that combined effects from new and recycled nutrient sources buffer south Texas coastal productivity against long periods of low nutrient input from fluvial flow. The comparison of biological responses at several trophic levels to temporal variability in nitrogen recycling and fluvial flow indicated the importance of freshwater nitrogen inputs in stimulating primary production. Freshwater nitrogen inputs also appeared to sustain long-term productivity by replacing nutrients lost from the system by extended reliance upon recycling.     

Spectral Irradiance and Phytoplankton Community Composition in a Blackwater-Dominated Estuary,Winyah Bay,South Carolina,USA

We investigated spatial and temporal relationships between spectral irradiance and phytoplankton community composition in the blackwater-influenced estuary Winyah Bay, South Carolina. Upstream, high concentrations of chromophoric dissolved organic matter (CDOM) absorbed blue wavelengths, resulting in a predominantly red light field. Green light prevailed downstream near the lower-CDOM coastal ocean, and phytoplankton community composition was distinct from upstream and mid-estuarine communities. Diatoms were abundant throughout the estuary in January, August, and October, cryptophytes dominated in July, and chlorophytes were abundant in December 2006. Only diatoms and chlorophytes showed significant covariation with the spectral attenuation coefficient (k(λ)): Chlorophytes showed positive relationships with k(442) (blue light) while diatoms were negatively correlated with k(442) and k(490) (violet to blue). Phytoplankton community composition in Winyah Bay appears to be driven by strong horizontal flow rather than gradients in spectral irradiance, but results indicate that water color is likely to play a greater role in blackwater-influenced estuaries with longer residence times.     

A preliminary mass balance model of primary productivity and dissolved oxygen in the Mississippi River Plume/Inner Gulf Shelf Region

A deterministic, mass balance model for phytoplankton, nutrients, and dissolved oxygen was applied to the Mississippi River Plume/Inner Gulf Shelf (MRP/IGS) region. The model was calibrated to a comprehensive set of field data collected during July 1990 at over 200 sampling stations in the northern Gulf of Mexico. The spatial domain of the model is represented by a three-dimensional, 21-segment water-column grid extending from the Mississippi River Delta west to the Louisiana-Texas border, and from the shoreline seaward to the 30–60 m bathymetric contours. Diagnostic analyses and numerical experiments were conducted with the calibrated model to better understand the environmental processes controlling primary productivity and dissolved oxygen dynamics in the MRP/IGS region. Underwater light attenuation appears relatively more important than nutrient limitation in controlling rates of primary productivity. Chemical-biological processes appear relatively more important than advective-dispersive transport processes in controlling bottom-water dissolved oxygen dynamics. Oxidation of carbonaceous material in the water column, phytoplankton respiration, and sediment oxygen demand all appear to contribute significantly to total oxygen depletion rates in bottom waters. The estimated contribution of sediment oxygen demand to total oxygen-depletion rates in bottom waters ranges from 22% to 30%. Primary productivity appears to be an important source of dissolved oxygen to bottom waters in the region of the Atchafalaya River discharge and further west along the Louisiana Inner Shelf. Dissolved oxygen concentrations appear very sensitive to changes in underwater light attenuation due to strong coupling between dissolved oxygen and primary productivity in bottom waters. The Louisiana Inner Shelf in the area of the Atchafalaya River discharge and further west to the Texas border appears to be characterized by significantly different light attenuation-depth-primary productivity relationships than the area immediately west of the Mississippi Delta. Nutrient remineralization in the water column appears to contribute significantly to maintaining chlorophyll concentrations on the Louisiana Inner Shelf.     

Environmental Forcing of Phytoplankton in a Mediterranean Estuary (Guadiana Estuary,South-western Iberia): A Decadal Study of Anthropogenic and Climatic Influences

Phytoplankton seasonal and interannual variability in the Guadiana upper estuary was analyzed during 1996–2005, a period that encompassed a climatic controlled reduction in river flow that was superimposed on the construction of a dam. Phytoplankton seasonal patterns revealed an alternation between a persistent light limitation and episodic nutrient limitation. Phytoplankton succession, with early spring diatom blooms and summer–early fall cyanobacterial blooms, was apparently driven by changes in nutrients, water temperature, and turbulence, clearly demonstrating the role of river flow and climate variability. Light intensity in the mixed layer was a prevalent driver of phytoplankton interannual variability, and the increased turbidity caused by the Alqueva dam construction was linked to pronounced decreases in chlorophyll a concentration, particularly at the start and end of the phytoplankton growing period. Decreases in annual maximum and average abundances of diatoms, green algae, and cyanobacteria were also detected. Furthermore, chlorophyll a decreases after dam filling and a decrease in turbidity may point to a shift from light limitation towards a more nutrient-limited mode in the near future.     

Impacts of SW Monsoon on Phytoplankton Community Structure Along the Western Coastal BOB: an HPLC Approach

The major Indian rivers bring significant amount of freshwater along with inorganic nutrients and sediment load in to the northern Bay of Bengal (BOB) during the southwest monsoon (SWM); the southern bay does not experience equal freshening. This contrasting pattern may considerably impact the physicochemical features and phytoplankton community composition in this bay and was investigated during a coastal cruise during the SWM covering eight river plumes from both northern and southern bay; phytoplankton pigments and physicochemical parameters were analysed from different depths (0, 10, 25, and 50 m). Significant freshening, stratification and warmer waters were noticed in the northern bay relative to its southern part. Phytoplankton pigment analysis and diagnostic pigment-based size class analysis revealed the dominance of microphytoplankton (mainly diatoms) in the northern bay and were mostly confined to the surface waters. Their abundance was positively correlated with dissolved silicate (DSi) concentrations and inversely with salinity. Nanophytoplankton and picophytoplankton (prymnesiophytes, chrysophytes and cyanophytes) were mostly noticed in the subsurface waters and dominated the southern bay. This finding suggests that the dominance of microphytoplankton in the northern bay may significantly contribute to higher particle flux which has been reported earlier. Therefore, any modification in future river discharge, which is in turn related to the intensity of Indian summer monsoon, will alter the phytoplankton community structure in the coastal BOB and may be further cascaded to the other vital ecosystem components like fisheries resources, organic carbon export flux and benthic production.     

Spatial and seasonal patterns in sediment nitrogen remineralization and ammonium concentrations in San Francisco Bay,California

Nitrogen remineralization and extractable ammonium concentrations were measured in sediments from several locations in North and South San Francisco bays. In South Bay, remineralization rates decreased with depth in sediment and were highest in the spring following the seasonal phytoplankton bloom. At the channel stations, peak remineralization lagged peak water-column phytoplankton biomass (as measured by chlorophylla) by a month. Remineralization rates were generally higher in South Bay than North Bay. The lower remineralization rates in North Bay may be a result of anomalously low phytoplankton production and thus reduced deposition to the sediments, as well as low reiverine organic inputs to the upper estuary in recent years. Remineralization rates were positively correlated to carbon and nitrogen content of the sediments. In general, ammonium profiles in South Bay sediments showed no increase in deeper (4–8 cm) sediments. In North Bay, ammonium concentrations were greatest at stations with highest remineralization rates, and, in contrast to South Bay, extractable ammonium increased in deeper sediment. Differences in ammonium pools between North Bay and South Bay may be a result of increased irrigation by deep-dwelling macrofauna, which are more abundant in South Bay.     

A Decade of Change in the Skidaway River Estuary. III. Plankton

The Skidaway River estuary, GA (USA), a tidally dominated subtropical system surrounded by extensive Spartina salt marshes, is experiencing steady increases in nutrients, chlorophyll, and particulate matter and decline in dissolved oxygen, associated with cultural eutrophication. A long-term study is documenting changes in these parameters: previous papers Verity (Estuaries 25:944–960, 2002a, Estuaries 25:961–975, b) reported on hydrography, nutrients, chlorophyll, and particulate matter during 1986–1996; plankton community responses are reported here. Phytoplankton, bacteria, heterotrophic nanoplankton and dinoflagellates, ciliates, and copepods exhibited strong seasonal cycles in abundance driven by temperature and resource availability, typically with summer maxima and winter minima. However, cultural eutrophication coincided with altered planktonic food webs as autotrophic and heterotrophic communities responded to increasing concentrations and changing ratios of inorganic and organic nutrients, potential prey, and predators. Small (<8 μm) photosynthetic nanoplankton increased in absolute concentration and also relative to larger cells. In contrast, diatoms did not show consistent increases in abundance, despite significant long-term increases in ambient silicate concentrations. Mean annual bacteria concentrations approximately doubled, and eukaryotic organisms in the microbial food web (heterotrophic and mixotrophic flagellates, dinoflagellates, ciliates, and metazoan zooplankton) also increased. All plankton groups except copepods showed trends of increasing annual amplitudes between seasonal high and low values, with higher peak concentrations each year. These observations suggest that the eutrophication signal was gradually becoming uncoupled from regulatory mechanisms. Theory and evidence from other more impacted waters suggest that, if these patterns continue, changes in the structure and function of higher trophic levels will ensue.     

The Influence of Coastal Nutrients on Phytoplankton Productivity in a Shallow Low Inflow Estuary,Drakes Estero,California (USA)

Seasonal wind-driven upwelling along the U.S. West Coast supplies large concentrations of nitrogen to surface waters that drives high primary production. However, the influence of coastal upwelled nutrients on phytoplankton productivity in adjacent small estuaries and bays is poorly understood. This study was conducted in Drakes Estero, California, a low inflow estuary located in the Point Reyes National Seashore and the site of an oyster mariculture facility that produces 40 % of the oysters harvested in California. Measurements of nutrients, chlorophyll a, phytoplankton functional groups, and phytoplankton carbon and nitrogen uptake were made between May 2010 and June 2011. A sea-to-land gradient in nutrient concentrations was observed with elevated nitrate at the coast and higher ammonium at the landward region. Larger phytoplankton cells (>5 μm diameter) were dominant within the outer and middle Estero where phytoplankton primary productivity was fueled by nitrate and f-ratios were >0.5; the greatest primary production rates were in the middle Estero. Primary production was lowest within the inner Estero, where smaller phytoplankton cells (<5 μm) were dominant, and nitrogen uptake was dominated by ammonium. Phytoplankton blooms occurred at the outer and middle Estero and were dominated by diatoms during the spring and dry-upwelling seasons but dinoflagellates during the fall. Small flagellated algae (>2 μm) were dominant at the inner Estero where no blooms occurred. These results indicate that coastal nitrate and phytoplankton are imported into Drakes Estero and lead to periods of high new production that can support the oyster mariculture; a likely scenario also for other small estuaries and bays.     

Phytoplankton Growth Balanced by Clam and Zooplankton Grazing and Net Transport into the Low-Salinity Zone of the San Francisco Estuary

We estimated the influence of planktonic and benthic grazing on phytoplankton in the strongly tidal, river-dominated northern San Francisco Estuary using data from an intensive study of the low salinity foodweb in 2006–2008 supplemented with long-term monitoring data. A drop in chlorophyll concentration in 1987 had previously been linked to grazing by the introduced clam Potamocorbula amurensis, but numerous changes in the estuary may be linked to the continued low chlorophyll. We asked whether phytoplankton continued to be suppressed by grazing and what proportion of the grazing was by benthic bivalves. A mass balance of phytoplankton biomass included estimates of primary production and grazing by microzooplankton, mesozooplankton, and clams. Grazing persistently exceeded net phytoplankton growth especially for larger cells, and grazing by microzooplankton often exceeded that by clams. A subsidy of phytoplankton from other regions roughly balanced the excess of grazing over growth. Thus, the influence of bivalve grazing on phytoplankton biomass can be understood only in the context of limits on phytoplankton growth, total grazing, and transport.     

Ammonium and phosphate dynamics in a Virginia salt marsh

Experimental chambers were used in a Virginia salt marsh to partition the tidal flux of dissolved nutrients occurring at the marsh surface and in the water column. On five dates from June to October 1989, six replicate chambers in the short Spartina alterniflora zone were monitored over complete tidal cycles. When reservoir water, used to simulate tidal flooding in the chambers, was initially low in dissolved nutrients, the marsh surface was a source of both ammonium and phosphate to the water column. Calculations of the physical processes of diffusion and advection could not account for total nutrient release from the marsh surface. We hypothesize the primary source of nutrients was organic matter mineralization in surface sediments, which released nutrients into the flooding water column. Assimilation (uptake) of phosphate measured in water-column incubation experiments was nearly equal to phosphate released from the marsh surface. Surface release of ammonium, however, was somewhat greater than water-column uptake. In this salt marsh, benthic production and release of ammonium and phosphate is comparable in magnitude to pelagic consumption, thereby yielding only a small “net” transfer of these nutrients to the estuary.     

Quantifying Striped Bass (<Emphasis Type="Italic">Morone saxatilis</Emphasis>) Dependence on Saltmarsh-Derived Productivity Using Stable Isotope Analysis

Each winter, populations of striped bass (Morone saxatilis) migrate north from the coastal mid-Atlantic region of the US to the coastal waters of New England. During this migration, striped bass spend significant time in estuaries and saltmarshes, presumably to forage. However, the extent to which saltmarsh productivity supports striped bass remains unresolved. We used a three-isotope Bayesian mixing model to determine the relative contribution of three primary producers [C4 saltmarsh cordgrass (Spartina spp.), phytoplankton, and benthic diatoms] to striped bass tissue. Phytoplankton (51 % contribution) and Spartina-derived sources (44 % contribution) are the primary sources of production to striped bass, while benthic diatoms made a relatively small contribution (5 %). Our results highlight the importance of saltmarshes to striped bass by showing that primary producers unique to saltmarsh ecosystems support a large proportion of striped bass production.     

Effect of sediment load on the microbenthic community of a shallow-water sandy sediment

Anthropogenic activities, such as construction work, dredging, and different kinds of recreation activities, can alter sediment loading in shallow coastal areas. The effect of increased load of fine sediment on the microbenthos (benthic microalgae, bacteria, and meiofauna) was studied in two experiments using undisturbed cores of a sandy sediment from a microtidal bay on the Swedish west coast. In each experiment, a total of 24 cores were incubated in an outdoor flow-through set-up. Twelve cores were treated with a 2.5-mm thick layer of autoclaved fine-grained, (silt) carbon-rich surface sediment. In the first experiment, estimates of the impact were based on measurements of chlorophylla, biomass of microalgae, bacteria, and meiofauna, and bacterial production. The main purpose of the second experiment was to study the effect on sediment oxygen profiles using microsensors. Within a week, after being covered by fine sediment, benthic microalgae (particularly diatoms) had migrated upward and the oxygen profiles were restored at the sediment surface by photosynthesis. However, the oxygen-producing layer became thinner and the algal composition changed. Bacterial biomass was restored to the same level as in the sandy sediment. Meiofauna also appeared to move upward and the meiofaunal composition was re-established. The results suggest that the microbenthic community of sandy sediment has an inherent capacity to recover after a moderate deposition of fine-particle sediment. Active upward migration of benthic diatoms appears to be a key mechanism for restoring the oxygenation of the sediment surface. The altered sediment type also implies changed species composition, and hence altered benthic trophic interactions, which may affect, for example, flatfish recruitment.     

Phytoplankton Biomass and Composition in a River-Dominated Estuary During Two Summers of Contrasting River Discharge

Estuaries located in the northern Gulf of Mexico are expected to experience reduced river discharge due to increasing demand for freshwater and predicted periods of declining precipitation. Changes in freshwater and nutrient input might impact estuarine higher trophic level productivity through changes in phytoplankton quantity and quality. Phytoplankton biomass and composition were examined in Apalachicola Bay, Florida during two summers of contrasting river discharge. The <20 μm autotrophs were the main component (92?±?3 %; n?=?14) of phytoplankton biomass in lower (<25 psu) salinity waters. In these lower salinity waters containing higher dissolved inorganic nutrients, phycocyanin containing cyanobacteria made the greatest contribution to phytoplankton biomass (69?±?3 %; n?=?14) followed by <20 μm eukaryotes (19?±?1 %; n?=?14), and phycoerythrin containing cyanobacteria (4?±?1 %; n?=?14). In waters with salinity from 25 to 35 psu that were located within or in close proximity to the estuary, >20 μm diatoms were an increasingly (20 to 70 %) larger component of phytoplankton biomass. Lower summer river discharges that lead to an areal contraction of lower (5–25 psu) salinity waters composed of higher phytoplankton biomass dominated by small (<20 μm) autotrophs will lead to a concomitant areal expansion of higher (>25 psu) salinity waters composed of relatively lower phytoplankton biomass and a higher percent contribution by >20 μm diatoms. A reduction in summer river discharge that leads to such a change in quantity and quality of estuarine phytoplankton available will result in a reduction in estuarine zooplankton productivity and possibly the productivity of higher trophic levels.     

A benthic index of environmental condition of Gulf of Mexico estuaries

An index was developed for estuarine macrobenthos in the Gulf of Mexico that discriminated between areas with degraded environmental conditions and areas with undegraded or reference conditions. Test sites were identified as degraded or reference based on criteria for dissolved oxygen levels, sediment toxicity tests, and sediment contamination. Discriminant analysis was used to identify a suite of measures of benthic community composition and diversity that would most successfully distinguish degraded from undegraded sites. The resultant benthic index was composed of a linear combination of three factors: the Shannon-Wiener diversity index, the proportion of total benthic abundance as tubificid oligochaetes, and the proportion of total benthic abundance as bivalve molluscs. This index was used to evaluate the spatial patterns of degraded benthic resources in the Gulf of Mexico.     

Nutrient biogeochemistry in an upwelling-influenced estuary of the Pacific northwest (Tillamook Bay,Oregon, USA)

Tillamook Bay, Oregon, is a drowned river estuary that receives freshwater input from 5 rivers and exchanges ocean water through a single channel. Similar to other western United States estuaries, the bay exhibits a strong seasonal change in river discharge in which there is a pronounced winter maximum and summer minimum in precipitation and runoff. The behavior of major inorganic nutrients (phosphorus, nitrogen, and silica) within the watershed is examined over seasonal cycles and under a range of river discharge conditions for October 1997–December 1999. Monthly and seasonal sampling stations include transects extending from the mouth of each river to the mouth of the estuary as well as 6–10 sites upstream along each of the 5 major rivers. Few studies have examined nutrient cycling in Pacific Northwest estuaries. This study evaluates the distributions of inorganic nutrients to understand the net processes occurring within this estuary. Based upon this approach, we hypothesize that nutrient behavior in the Tillamook Bay estuary can be explained by two dominant factors: freshwater flushing time and biological uptake and regeneration. Superimposed on these two processes is seasonal variability in nutrient concentrations of coastal waters via upwelling. Freshwater flushing time determines the amount of time for the uptake of nutrients by phytoplankton, for exchange with suspended particles, and for interaction with the sediments. Seasonal coastal upwelling controls the timing and extent of oceanic delivery of nutrients to the estuary. We suggest that benthic regeneration of nutrients is also an important process within the estuary occurring seasonally according to the flushing characteristics of the estuary. Silicic acid, nitrate, and NH₄ ⁺ supply to the bay appears to be dominated by riverine input. PO₄ ⁻³ supply is dominated by river input during periods of high river flow (winter months) with oceanic input via upwelling and tidal exchange important during other times (spring, summer, and fall months). Departures from conservative mixing indicate that internal estuarine sources of dissolved inorganic phosphorus and nitrogen are also significant over an annual cycle.     

Influence of Organic Enrichment and <Emphasis Type="Italic">Spisula subtruncata</Emphasis> (da Costa, 1778) on Oxygen and Nutrient Fluxes in Fine Sand Sediments

The role of labile organic material and macrofaunal activity in benthic respiration and nutrient regeneration have been tested in sublittoral fine sand sediments from the Gulf of Valencia (northwestern Mediterranean Sea). Three experimental setups were made using benthic chambers. One experiment was performed in-situ through the annual cycle in a well-sorted fine sand community. The remaining experiments were carried out with mesocosms under laboratory conditions: one with different concentrations of organic enrichment (mussel meat and concentrated diatoms culture), and the other adding two different densities of the endofaunal bivalve Spisula subtruncata. Biochemical variables in surface sediment and changes in oxygen consumption and nutrient fluxes throughout incubation period were studied in each experiment. In the in situ incubations, dissolved oxygen (DO) fluxes showed a strong correlation with sedimentary biopolymeric fraction of organic carbon. Organic enrichment in the laboratory experiments was responsible for increased benthic respiration. However, sediment response (expressed as DO uptake and dissolved inorganic nitrogen—DIN—release) between oligotrophic and eutrophic conditions was more intense than between eutrophic and hypertrophic conditions. S. subtruncata abundances close to 400 and 850 ind m^?2 also intensified benthic metabolism. DO uptake and DIN production in mesocosms with added fauna were between 60 and 75 % and 65–100 % higher than in the control treatment respectively. The results of these three experiments suggest that the macrobenthic community may increase the benthic respiration by roughly a factor of two in these bottoms, where S. subtruncata is one of the dominant species. Both organic enrichment and macrobenthic community in general, and S. subtruncata in particular, did not seem to have a relevant role in P and Si cycles in these sediments.     

Nutrient limitation in the lower Housatonic River estuary

One of the most serious threats to freshwater and marine ecosystems is high rates of anthropogenic nutrient loading, particularly nitrogen (N) and phophorus (P). One of the major freshwater sources of nutrients to Long Island Sound (LIS) is the Housatonic River (HR). Current management plans that call for reducing N inputs without reducing P inputs may change the N: P ratio in the water column and the pattern of algal nutrient limitation and species composition in the tidal portion of the river. To assess the current pattern of algal nutrient limitation in the HR estuary, nutrient bioassays were conducted in spring, summer, and fall at 5 sites throughout the tidal portion and adjacent LIS. Diatoms were a dominant taxon at all sites throughout the sampling period. Other seasonally important taxa include cyanobacteria, cryptophytes, and euglenoids. Phytoplankton in LIS were always strongly N limited and were co-limited by P in spring. During low flow (summer), phytoplankton in the lower HR estuary were N limited. Phytoplankton in the middle reaches showed no evidence of N or P limitation and were likely limited by other factors. In spring, phytoplankton in the upper HR estuary were P limited. Periods of N or P limitation were better correlated with periods of lower concentrations of nitrate or phosphate than with differences in N: P ratio. These results suggest that decreases in N concentration could increase the prevalence of N limitation throughout the estuary that in turn may reduce phytoplankton biomass and alter species composition of the phytoplankton.     

Spatial and Temporal Variability of Benthic Oxygen Demand and Nutrient Regeneration in an Anthropogenically Impacted New England Estuary

Strong benthic–pelagic coupling is an important characteristic of shallow coastal marine ecosystems. Building upon a rich history of benthic metabolism data, we measured oxygen uptake and nutrient fluxes across the sediment–water interface along a gradient of water column primary production in Narragansett Bay, RI (USA). Despite the strong gradients seen in water column production, sediment oxygen demand (SOD) and benthic nutrient fluxes did not exhibit a clear spatial pattern. Some of our sites had been studied in the 1970s and 1980s and thus allowed historical comparison. At these sites, we found that SOD and benthic fluxes have not changed uniformly throughout Narragansett Bay. In the uppermost portion of the bay, the Providence River Estuary, we observed a significant decrease in dissolved inorganic phosphorus fluxes which we attribute to management interventions. At another upper bay site, we observed significant declines in SOD and dissolved inorganic nitrogen fluxes which may be linked to climate-induced decreases in water column primary production and shifts in bloom phenology. In the 1970s, benthic nutrient regeneration supplied 50% to over 200% of the N and P needed to support primary production by phytoplankton. Summer nutrient regeneration in the Providence River Estuary and Upper bay now may only supply some 5–30% of the N and 3–20% of the P phytoplankton demand.     

Mixing behavior of dissolved organic carbon and its potential biological significance in the Pawcatuck River Estuary

The distributions of dissolved organic carbon (DOC), phytoplankton biomass (as measured by in vivo fluorescence), total nitrogen and phosphorus, and light extinction were observed on 10 cruises during 1989 and 1990 in the Pawcatuck River estuary located in southern Rhode Island. In the lower estuary, the distance of peak phytoplankton biomass from the head of the estuary was positively correlated with river discharge while the magnitude of the peak increased with decreasing discharge. High light-extinction appeared to limit the accumulation of biomass in the upper estuary. Variability in light extinction was largely (50%) explained by variation in the concentration of DOC. Salinity versus constituent plots suggested that DOC behaved nonconservatively in the estuary. These observational data indicate that the mixing behavior of DOC in the estuary influences light extinction and thus may limit accumulation of phytoplankton biomass in the upper estuary. This interpretation of observational data was supported by experimental work that demonstrated the significant contribution of DOC to light extinction, and by measurements, of phytoplankton productivity that showed greater light limitation in the upper estuary.     

Climatic and Tidal Forcing of Hydrography and Chlorophyll Concentrations in the Columbia River Estuary

Hydrographic patterns and chlorophyll concentrations in the Columbia River estuary were compared for spring and summer periods during 2004 through 2006. Riverine and oceanic sources of chlorophyll were evaluated at stations along a 27-km along-estuary transect in relation to time series of wind stress, river flow, and tidal stage. Patterns of chlorophyll concentration varied between seasons and years. In spring, the chlorophyll distribution was dominated by high concentrations from freshwater sources. Periods of increased stream flow limited riverine chlorophyll production. In summer, conversely, upwelling winds induced input of high-salinity water from the ocean to the estuary, and this water was often associated with relatively high chlorophyll concentrations. The frequency, duration, and intensity of upwelling events varied both seasonally and interannually, and this variation affected the timing and magnitude of coastally derived material imported to the estuary. The main source of chlorophyll thus varied from riverine in spring to coastal in summer. In both spring and summer seasons and among years, modulation of the spring/neap tidal cycle determined stratification, patterns of mixing, and the fate of (especially freshwater) phytoplankton. Spring tides had higher mixing and neap tides greater stratification, which affected the vertical distribution of chlorophyll. The Columbia River differs from the more tidally dominated coastal estuaries in the Pacific Northwest by its large riverine phytoplankton production and transfer of this biogenic material to the estuary and coastal ocean. However, all Pacific Northwest coastal estuaries investigated to date have exhibited advection of coastally derived chlorophyll during the upwelling season. This constitutes a fundamental difference between Pacific Northwest estuaries and systems not bounded by a coastal upwelling zone.