Conservation status of New Zealand marine mammals (suborders Cetacea and Pinnipedia), 2009

The conservation status of New Zealand (NZ) marine mammals (suborders Cetacea and Pinnipedia) is reappraised using the 2008 version of the NZ Threat Classification System. The list comprises 56 taxa (named species or subspecies, and as yet unnamed forms or types) in the following categories: Threatened—eight taxa (five Nationally Critical and three Nationally Endangered); Vagrant—six taxa; Migrant—20 taxa; and Data Deficient—13 taxa. A further nine taxa are listed as Not Threatened. Relative to the previous listing, the threat status of two species worsened: the NZ sea lion (Phocarctos hookeri) was uplisted to Nationally Critical and the bottlenose dolphin (Tursiops truncatus) was uplisted to Nationally Endangered. No species was considered to have an improved status. With the uplisting of the NZ sea lion and the continued listing of the Hector's dolphin (Cephalorhynchus hectori hectori) as Endangered and Maui's dolphin (C. hectori maui) as Nationally Critical, all three endemic NZ marine mammals are now considered threatened with extinction. We considered future research or management actions that would allow the downlisting of the eight taxa currently listed as Threatened.     

Assessment of chemical and physical treatments to selectively kill non-indigenous freshwater zooplankton species

Non-indigenous zooplankton species pose a biosecurity threat to New Zealand’s freshwater native taxa. Nine species are known to have established in New Zealand lakes to date. The spread of some zooplankton taxa is linked to the translocation of farmed fish, principally grass carp (Ctenopharyngodon idella), and recreational vessel movements. The aims of this study were to assess the effectiveness of a range of chemical and physical treatments for transport water and associated equipment to kill freshwater cladoceran, copepod, and rotifer zooplankton species, and their risk to non-target fish. Sodium chloride was the most effective and applicable chemical treatment tested at length in the cladoceran and, combined with physical treatment via mechanical filtration of water or hot water immersion of equipment (to also manage the risk of diapausing eggs), represents an effective option for the control of non-indigenous zooplankton, with limited impact on stenohaline fish.     

Habitat use and longitudinal distribution patterns of native fish from a near pristine Stewart Island,New Zealand,stream

Distribution, abundance, and habitat preferences of native fish were investigated down the length of a relatively pristine, medium‐sized, fourth‐order stream on Stewart Island, New Zealand. A limited fish fauna was recorded (six species), including three threatened large galaxiid species (Galaxias argenteus, Galaxias fasciatus, and Galaxias brevipinnis), which have restricted distributions on mainland New Zealand. Results indicated that these large galaxiids occupy diverse habitats including pools and backwaters within the mainstems of this stream. Their extensive distributions and wide habitat usage were attributed to factors such as the intact catchment vegetation, unmodified stream channel, and the absence of introduced fishes, particularly salmonids. Results suggest that some native species have been excluded from mainstem habitats elsewhere in New Zealand. It was also evident that interactions among the native species influenced habitat use; G. brevipinnis avoided backwaters, runs, and pools in reaches occupied by G. fasciatus and Anguilla dieffenbachii; whereas G. fasciatus appeared to avoid habitats occupied by G. argenteus and A dieffenbachii. Maximum densities and biomass of galaxiids and eels occurred in deepwater habitats (>0.75 m). Furthermore the fish inhabiting these deeper waters were larger and more likely to be female. These findings have significant implications for the design and application of sampling protocols for native New Zealand fishes and for the protection of their habitats. If deeper waters are not sampled then species, sex, and size biased data may result.     

Does one size fit all? An evaluation of length–weight relationships for New Zealand's freshwater fish species

Length–weight relationships are a fundamental tool for assessing populations and communities in fisheries science. Many researchers have collected length–weight data throughout New Zealand, yet parameters describing these relationships remain unpublished for many species of freshwater fish. We compiled 285,124 fish records from researchers and institutions across New Zealand to parameterise length–weight equations, using both power and quadratic models, for 53 freshwater species belonging to 13 families. The influence of location and sex on length–weight relationships was also assessed. Location, in particular, generated different length–weight relationships for 65% of the species examined. Length–weight equations were validated by comparing predicted weights against independently measured weights from 25 electrofished sites across New Zealand and the equations were highly accurate (R²>0.99). Recommendations are made about how to robustly apply this new resource which should assist freshwater fisheries researchers throughout New Zealand.     

What is an endangered species worth? Threshold costs for protecting imperilled fishes in Canada

The protection of imperilled fish species is increasingly urgent given ongoing fisheries declines and the degradation of aquatic habitats. In Canada, threatened aquatic species were less likely than terrestrial species to be listed under the Species at Risk Act (SARA), the main legal instrument for bestowing protection, in the early years of the Act's implementation. In this paper, the existence of economic thresholds that might have hampered the protection of Canadian marine and freshwater fishes is examined. The analysis of the socio-economic data used to inform listing decisions about threatened fish taxa over the past decade reveals that the likelihood of being listed declines non-linearly with increasing estimated costs of protection but does not vary with proposed threat status. The estimated threshold cost (i.e., the point at which the likelihood of not being listed=0.5) was ∼$5,000,000 (∼$1,400,000 to ∼$31,400,000, 95% CI) per decade for freshwater species but only ∼$90,000 ($∼50,000 to ∼$140,000, 95% CI) per decade for marine fish taxa. In fact, no marine fish species with an anticipated cost of listing greater than zero was listed for protection. The presence of existing management legislation and qualitative statements about negative impacts of listing on exploitation generally led to denying protection to marine but not to freshwater species. These findings highlight both a large and inconsistent emphasis on costs of protection in SARA listing decisions, to the detriment of marine fish species.     

Differences in the distributions of freshwater fishes and decapod crustaceans in urban and forested streams in Auckland,New Zealand

Using data from existing studies, assemblages of freshwater fishes and decapod crustaceans were examined at 39 sites in urbanised catchments and 57 sites in forested (reference) catchments within the greater Auckland region, New Zealand. Eleven native and 1 exotic fish species and 2 native decapod crustacean species were recorded. Species richness and fish Index of Biotic Integrity (IBI) scores were lower overall in streams in urbanised catchments. Shortfin eel (Anguilla australis) and mosquitofish (Gambusia affinis) were more dominant in urban streams; all other commonly occurring species were found significantly more often in reference streams. Non‐diadromous native species (Cran's bully (Gobiomorphus basalts) and freshwater crayfish (Paranephrops planifions)) were absent from urban streams, but relatively abundant in reference streams. This absence of non‐diadromous species, together with the urban occurrence of five diadromous species suggests that migratory barriers pose less of a threat to freshwater communities than physico‐chemical disturbance in streams in the Auckland urban region.     

Laboratory culture of Galaxias maculatus and potential applications

Galaxias maculatus has considerable potential as a laboratory animal. Laboratory techniques used to maintain, artificially spawn, hatch, and rear this New Zealand native freshwater fish are described. Potential research applications for the fish, the eggs, and the larvae are outlined. The development of the larvae is described.     

Diadromy and longitudinal patterns of upstream penetration of freshwater fish in Taranaki,New Zealand

Diadromous fish species dominate the New Zealand freshwater fish fauna and make up 15 of the 17 native fish species found on the Taranaki Ring Plain. Trajectories of occurrence in relation to elevation and distance from the sea are described for 11 diadromous and 2 non‐diadromous species using data from the New Zealand Freshwater Fish Database and data collected over the summer of 1997/ 98. Distinctive distributions were found for most of the species related to their differing migratory strategies and abilities. The species were ranked based on components of these trajectories to compare their penetrative ability. Comparison of the ranking methods used revealed they produced similar results. The ranking of the 11 diadromous species in Taranaki relative to each other revealed similar rankings to those for the same species from the West Coast of the South Island. The non‐migratory native fish, Cran's bully (Gobiomorphus basalis), was not found on the western side of the mountain. This distribution is thought to be the result of the local extinction of non‐migratory species in high gradient or unstable streams.     

基于高通量测序技术解析鲣鱼(Katsuwonus pelamis)鱼油和鱼白调控肠道菌群结构作用

本研究利用高通量测序技术分析小鼠喂食鲣鱼(Katsuwonus pelamis)鱼油和鱼白酶解液后肠道微生物的多样性、群落组成以及结构的变化,探讨高蛋白、高脂肪饮食对人类健康的影响。研究结果显示:喂食鱼油组小鼠的肠道微生物丰富且多样。在门水平上,对照组和鱼油组的优势菌门为拟杆菌门(Bacteroidetes);鱼白组的优势菌门为厚壁菌门(Firmicutes)。在科水平上,对照组和鱼油组中的优势菌科为Muribaculaceae;鱼白组中的优势菌科为毛螺菌科(Lachnospiraceae)。在属水平上,对照组和鱼油组中的优势菌属为Muribaculum;鱼白组中的优势菌为Lachnoclostridium;对照组、鱼油组和鱼白组小鼠的肠道微生物群落中瘤胃球菌属(Ruminococcus)和拟杆菌属(Bacteroides)等丰度较高。在种水平上,对照组和鱼油组中的优势菌为Muribaculum intestinale;鱼白组中的优势菌为解糖梭菌(Clostridium saccharolyticum)。研究结果证明鲣鱼鱼油和鱼白可以调节菌群结构和组成,增加肠道有益菌,减少病原菌的丰度等。     

Distribution of fish in tributaries of the lower Taieri/Waipori rivers,South Island,New Zealand

The distribution of fish within eight small streams feeding into the lower Taieri and Waipori Rivers on the east coast of New Zealand's South Island was examined. A total of eight native and two introduced species were recorded. Eels (Anguilla spp.) and giant kokopu (Galaxias argenteus Gmelin) were the most widely distributed species being located in all streams surveyed. Common bullies (Gobiomorphus cotidianus McDowall) and brown trout (Salmo trutta Linnaeus) were also widely distributed being detected in seven and six of the streams respectively. Three streams of potential conservation significance were identified. These were Picnic Gully Creek which contained a significant population of banded kokopu (Galaxias fasciatus Gray), a Category C threatened species, and Cullens and Alex Creeks which contained significant populations of giant kokopu, a Category B threatened species. The population of giant kokopu in Cullens and Alex Creeks currently represents the largest known population of this species on the east coast of New Zealand (excluding Southland). It has been suggested that brown trout may influence the distribution of native galaxiids. The longitudinal distribution of giant kokopu and brown trout in streams was examined at night using a continuous spotlight sampling approach. Distributions of these two species rarely overlapped at a local scale. Coarse habitat use data indicated that brown trout regularly occupied a variety of habitat types including modified agricultural channels. In contrast, giant kokopu rarely used agricultural channels being predominantly located in pool habitats.     

Occurrence and recruitment of fish larvae in a northern New Zealand estuary

The occurrence of fish larvae and the effect of diel and tidal variation on catches was studied at about biweekly intervals for a year in Whangateau Harbour, a small well mixed northern New Zealand estuary. Larvae from 31 taxa were identified. The annual pattern of larval occurrence was typical for fish in temperate waters, with a major peak of abundance in early summer. For six taxa, larval densities were significantly greater in night-time than in daytime catches, and analysis of length-frequency distributions suggested that for two species this was due to daytime net avoidance.No significant differences were found between the densities of larvae caught on flood and ebb tides, but changes in length-frequency distributions were significant for two species. Recently hatched larvae of an unidentified goby were found leaving the harbour, where they were probably spawned, while older larvae of this species appeared to be recruiting back in. Larvae of the flounder Rhobosolea plebeia were also apparently recruiting into the harbour. In the absence of a two-layered circulation pattern larvae relied upon tidal transport for recruitment, and probaby ensured their retention by rapidly settling to the bottom.     

Diets of alpine galaxias (Galaxias paucispondylus Stokell) and longjawed galaxias (G. prognathus Stokell) in a South Island,New Zealand,high‐country stream

Thedietsofthealpinegalaxias(Galaxias paucispondylus Stokell, 1938) and the longjawed galaxias (G. prognathus Stokell, 1940) were studied in Deep Creek, a high‐country stream in the central South Island of New Zealand. Both species are small, slender fish with entirely freshwater life cycles. Their diets were very similar and consisted of aquatic invertebrates, dominated by the larvae of Deleatidium spp. (Ephemeroptera), Hydrobiosis spp. (Trichoptera), and Chironomidae (Diptera). Although diets partly reflected what was available in the stream, both fish selected soft‐bodied prey in preference to cased or harder shelled prey. Both species are probably nocturnal feeders.     

Faecal indicator bacteria in New Zealand freshwater fish: a pilot study

Recent studies have suggested that poikilothermic animals, such as fish, may represent a previously overlooked source of the faecal indicator bacteria (FIB) used for the assessment of water quality. However, quantitative studies of FIB in poikilotherms are scarce. We investigated the presence of FIB in the faeces of five freshwater fish species. E. coli and enterococci were detected in 71 and 76% of faecal samples, respectively. Concentrations were highly variable, with maximum concentrations (2.1?×?10⁴ E. coli and 1.3?×?10⁶ enterococci per gram of faecal material) up to four orders of magnitude higher than present in the water column. FIB were not detected in faecal samples from marine fish. Our findings suggest that FIB ingested from the environment may be capable of replication within the fish gut, making fish a potential source and transport mechanism for FIB in New Zealand freshwaters. This may have implications for water quality monitoring.     

Fish community responses to invasive fish removal and installation of an exclusion barrier at Lake Ohinewai,Waikato

Introduced common carp (Cyprinus carpio) are a recognised threat to New Zealand’s freshwater ecosystems. In 2011, an invasive fish removal programme was undertaken in 16.8 ha Lake Ohinewai, a Waikato riverine lake. Active fish removal using netting and boat electrofishing was supported by installation of a one-way exclusion barrier on the outflow to Lake Ohinewai. The barrier was designed to allow fish passage downstream out of the lake, while preventing adult carp from moving upstream. The estimated carp population was reduced from 8,548 fish (5,863–12,937, 95% confidence limits) in 2011–454 fish (251–889, 95% CL) in 2014. However, by 2016 the carp population had recovered to 2,063 fish (1,070–4,328, 95% CL) with increased abundance in invasive brown bullhead catfish (Ameiurus nebulosus) also observed. This research demonstrates that carp populations can be reduced to low abundances in the short to medium term, but continued removal will be required for on-going control.     

Dissolved oxygen criteria for freshwater fish in New Zealand: a revised approach

Maintenance of suitable conditions in lowland rivers for both fish passage and resident species is crucial to ensuring the long-term sustainability of fish populations. The dissolved oxygen concentration of water is a key factor controlling habitat quality for fish and a critical measure of stream health. Continued land use intensification and greater exploitation of water resources has contributed towards increasing the frequency and duration of low dissolved oxygen events in lowland rivers and the associated risk of adverse effects on fish communities. Revised guidelines are therefore proposed to support setting of biologically relevant dissolved oxygen limits for the protection of New Zealand freshwater fish communities. These guidelines account for both event magnitude and duration, identify different protection levels based on the risk of negative impacts and are based on current scientific knowledge on the tolerances of New Zealand fish species.     

A standardised sampling protocol for robust assessment of reach-scale fish community diversity in wadeable New Zealand streams

The New Zealand fish fauna contains species that are affected not only by river system connectivity, but also by catchment and local-scale changes in landcover, water quality and habitat quality. Consequently, native fish have potential as multi-scale bioindicators of human pressure on stream ecosystems, yet no standardised, repeatable and scientifically defensible methods currently exist for effectively quantifying their abundance or diversity in New Zealand stream reaches. Here we report on the testing of a back-pack electrofishing method, modified from that used by the United States Environmental Protection Agency, on a wide variety of wadeable stream reaches throughout New Zealand. Seventy-three first- to third-order stream reaches were fished with a single pass over 150–345 m length. Time taken to sample a reach using single-pass electrofishing ranged from 1–8 h. Species accumulation curves indicated that, irrespective of location, continuous sampling of 150 stream metres is required to accurately describe reach-scale fish species richness using this approach. Additional species detection beyond 150 m was rare (<10%) with a single additional species detected at only two out of the 17 reaches sampled beyond this distance. A positive relationship was also evident between species detection and area fished, although stream length rather than area appeared to be the better predictor. The method tested provides a standardised and repeatable approach for regional and/or national reporting on the state of New Zealand's freshwater fish communities and trends in richness and abundance over time.     

Description of the larval development of Galaxies maculatus in landlocked lentic and lotic systems in Western Australia

The larvae and larval development of Galaxias maculatus are described from a freshwater lake and a saline river in southwestern Western Australia. The size at hatching (7.0 mm total length) was similar to that recorded elsewhere for G. maculatus and the sequence of fin development (i.e., caudal, dorsal, anal, pectoral, and pelvic fins) was identical to that recorded for galaxiids generally. There were relative increases in the proportions of head length and body depth with larval growth and a decrease in proportion of pre‐anal length. Larvae from river habitats were smaller throughout larval stages of development than those from the lake. Fins of riverine fish began and completed development at a smaller size of fish than the lacustrine population, presumably as a response to the need for great motility at a smaller fish size in lotic environments.     

The Fish Assemblage of a Newfoundland Estuary: Diel, Monthly and Annual Variation

Twice monthly sampling over two 16 month periods at a shallow site on Newfoundland's east coast showed the fish assemblage to be dominated by four taxa (Gasterosteus aculeatus, G. wheatlandi, Osmerus mordax, Gadus spp.) that accounted for 96% of the individuals collected. Of the 16 479 fish measured, 65% were adults based on the estimated size of first spawning. The fish assemblage was dominated (86%) by species with demersal eggs, several of which spawn at the same shallow sites used by juveniles as nursery sites. Coastal spawning and demersal eggs maintain offspring in coastal nursery areas where survival is thought to be increased. Number of species and number of fish were both correlated with water temperature being highest from mid-summer to early autumn and lowest in winter. Temperature, time of spawning, and movements of juveniles and adults facilitated grouping species into five assemblages based on seasonal abundance: seasonal periodic species (summer and winter), regular species, regular species collected in all seasons except winter, and occasional (rare) species. At the diel scale, two consistent species groupings were observed: species that showed no significant difference between day and night and species caught primarily at night. Number of night species exceeded day species by a factor of two. No seine-caught species in shallow water exhibited significantly higher catches during the day. Observations by SCUBA divers indicated some species were more abundant during day time at slightly deeper depths. This observation in conjunction with day and night seining in shallower water, suggests these species aggregate in deeper water during day and move to shallow waters at night.     

Conservation status of New Zealand marine invertebrates, 2009

A re-evaluation of the threat status of New Zealand's marine invertebrates was undertaken in 2009, following earlier review of New Zealand's Threat Classification System and subsequent refinement of the national criteria for classifying threat of extinction to New Zealand's flora and fauna. Sufficient information was available to enable 295 marine invertebrate taxa to be fully evaluated and assigned to a national threat category. The 10 taxa at most risk of extinction (‘nationally critical’) were the giant seep clam Calyptogena sp., the primitive acorn barnacle Chionelasmus crosnieri, O'Shea's vent barnacle Volcanolepas osheai, the stalked barnacle Ibla idiotica, the four-blotched umbrella octopus Cirroctopus hochbergi, the roughy umbrella octopus Opisthoteuthis chathamensis, the giant squid Idioteuthis cordiformis, the large-egged polychaete Boccardiella magniovata and two gravel maggots, Smeagol climoi and Smeagol manneringi. The key threatening processes identified for marine invertebrates were fishing and land-use associated impacts such as sedimentation. We identified no taxa that had improved in threat status as a result of past or ongoing conservation management action, nor any taxa that had worsened in threat status because of known changes in their distribution, abundance or rate of population decline. We evaluated a small fraction of New Zealand's marine invertebrate fauna for their threat status. Many taxa remain ‘data deficient’ or unlisted. In addition to the most threatened taxa, we recommend these taxa and their habitats as priorities for further survey and monitoring.     

Migrating eels in a Canterbury river,New Zealand

A fish trap in the upper reaches of the South Branch stream, Canterbury, New Zealand, caught eels from December 1957 to October 1964. The downstream migrations of immature and adult eels of both New Zealand freshwater species (short‐finned Anguilla australis and long‐finned A. dieffenbachii) were recorded. These migrations showed a seasonal and a lunar periodicity, and the larger runs were also influenced by rainfall, water volume, or the passage of a depression. Seasonal peaks were marked for mature eels of both species, and for immature A. australis, but not for immature A. dieffenbachii.