Differences in the distributions of freshwater fishes and decapod crustaceans in urban and forested streams in Auckland,New Zealand

Using data from existing studies, assemblages of freshwater fishes and decapod crustaceans were examined at 39 sites in urbanised catchments and 57 sites in forested (reference) catchments within the greater Auckland region, New Zealand. Eleven native and 1 exotic fish species and 2 native decapod crustacean species were recorded. Species richness and fish Index of Biotic Integrity (IBI) scores were lower overall in streams in urbanised catchments. Shortfin eel (Anguilla australis) and mosquitofish (Gambusia affinis) were more dominant in urban streams; all other commonly occurring species were found significantly more often in reference streams. Non‐diadromous native species (Cran's bully (Gobiomorphus basalts) and freshwater crayfish (Paranephrops planifions)) were absent from urban streams, but relatively abundant in reference streams. This absence of non‐diadromous species, together with the urban occurrence of five diadromous species suggests that migratory barriers pose less of a threat to freshwater communities than physico‐chemical disturbance in streams in the Auckland urban region.     

Fish communities in New Zealand rivers and their relationship to environmental variables

Fish abundance data from selected electric‐fishing records in the New Zealand Freshwater Fish Database (NZFFD) were used to identify riverine fish communities and to examine their relationship to environmental variables included in the NZFFD. Only 21 fish species, 18 native species, and three introduced salmonids, were present at 1% or more of the sites. We defined 12 fish communities characterised by a dominant species: two salmonid communities, two non‐diadromous native communities, and eight communities characterised by diadromous native species. Altitude and distance inland were the two most significant variables, reflecting differences between communities dominated by diadromous and non‐diadromous species. The next most important variables were related to the geographic location of the site. Other environmental variables that were highly correlated with the fish community assignments were stream width and percentage of native forest or farming land use in the catchment upstream of the site. Of the local habitat variables, percentage of cascade habitat and percentage of sand substrate were the most important discriminators between communities. Despite having only a limited set of broad‐scale environmental variables, we achieved 47% success in the prediction of community membership using multiple discriminant analysis, with another 21% of sites being near misses. A greater knowledge of barriers to migration of diadromous species and fine‐scale variables describing in‐stream habitat would probably increase the predictive ability of the model, although collection of such data is time consuming and therefore impractical on a national scale.     

Effects of sediment on fish communities in East Cape streams,North Island,New Zealand

We examined the effects of sediment on fish communities at 38 sites in the East Cape region of New Zealand. Many streams in this region are subject to high sediment loads, a natural situation that has been exacerbated by the conversion of native forest to pasture. The fish community consisted of diadromous native species common throughout New Zealand that require access to and from the sea. We found that site altitude and distance inland were important factors in determining the abundance and composition of the fish community. We used four measures as indices of sediment load: suspended sediment concentration, median substrate size, substrate stability, and the ratio of the wetted width to the width of the active (non‐vegetated) stream channel. Although all indices were correlated, the ratio of wetted width to width of active channel was most closely related to fish abundance and diversity. Fish abundance and diversity reduced as sediment load increased among streams, with up to nine fish species in streams with low sediment loads and only two species in streams with high sediment loads. In‐stream habitat also varied with sediment load; as load increased, depth and substrate size decreased and velocity increased. These results suggest that activities that increase sediment loads in rivers will have a negative impact on native fish communities in New Zealand.     

Reduced abundance of banded kokopu (Galaxias fasciatus) and other native fish in turbid rivers of the North Island of New Zealand

Laboratory experiments demonstrated that migrant juvenile banded kokopu (Galaxias fasciatus Gray) were more sensitive to suspended sediment (SS) than other native fish species. If juvenile migrants avoid waters made turbid by SS and their recruitment to adult habitats up stream is reduced, then adult abundance may decline in turbid rivers. To test this, we compared the abundance of diadromous native fish between turbid and clear rivers. The duration (% time) for which SS concentrations exceeded 120 mg litre^‐1 (a critical level from laboratory experiments) during the migration season (August‐December) was estimated for over 150 New Zealand river sites. Turbid rivers were defined as those where SS concentrations exceeded 120 mg litre^‐1 for over 20% of the time and clear rivers as those where SS concentrations exceeded 120 mg litre^‐1 for less than 10% of the time. Eight turbid rivers and seven clear ones were identified where sufficient data on SS and native fish populations existed to permit a comparison. The mean occurrence of banded kokopu was reduced by 89.5% in turbid rivers and, although other diadromous fish species were also less common, banded kokopu was most affected. Densities of adult banded kokopu were also significantly lower in optimal stream habitats in three turbid compared with three matched clear rivers. We therefore concluded that the abundance of adult banded kokopu was reduced in turbid rivers and propose that this is because of reduced recruitment of juveniles in turbid rivers.     

Habitat use and longitudinal distribution patterns of native fish from a near pristine Stewart Island,New Zealand,stream

Distribution, abundance, and habitat preferences of native fish were investigated down the length of a relatively pristine, medium‐sized, fourth‐order stream on Stewart Island, New Zealand. A limited fish fauna was recorded (six species), including three threatened large galaxiid species (Galaxias argenteus, Galaxias fasciatus, and Galaxias brevipinnis), which have restricted distributions on mainland New Zealand. Results indicated that these large galaxiids occupy diverse habitats including pools and backwaters within the mainstems of this stream. Their extensive distributions and wide habitat usage were attributed to factors such as the intact catchment vegetation, unmodified stream channel, and the absence of introduced fishes, particularly salmonids. Results suggest that some native species have been excluded from mainstem habitats elsewhere in New Zealand. It was also evident that interactions among the native species influenced habitat use; G. brevipinnis avoided backwaters, runs, and pools in reaches occupied by G. fasciatus and Anguilla dieffenbachii; whereas G. fasciatus appeared to avoid habitats occupied by G. argenteus and A dieffenbachii. Maximum densities and biomass of galaxiids and eels occurred in deepwater habitats (>0.75 m). Furthermore the fish inhabiting these deeper waters were larger and more likely to be female. These findings have significant implications for the design and application of sampling protocols for native New Zealand fishes and for the protection of their habitats. If deeper waters are not sampled then species, sex, and size biased data may result.     

Remediation of a major acid mine drainage point source discharge restores headwater connectivity for a diadromous native fish

Rivers receiving acid mine drainage (AMD) are frequently depauperate in fish and impacts may extend long distances downstream. AMD inputs may form chemical barriers for migratory species and isolate fish in unimpacted headwaters. We investigated the response of a diadromous fish, kōaro (Galaxias brevipinnis), to remediation of an AMD tributary in a 5th order river in New Zealand. A 2005 survey indicated limited recruitment of kōaro in the river likely due to the chemical barrier of AMD. By 2010, water treatment in the contaminated tributary had raised pH from a median value of 4.3 to 6 and reduced metals in the lower river, notably aluminium from a median of 2.48 to 0.41?mg/L. In 2012, kōaro density had increased by an order of magnitude relative to 2005. Furthermore, a greater proportion of juvenile fish were present. These results indicate that large-scale remediation of discharges can reverse the impacts of AMD on fish migration.     

Distribution and growth of snapper Chrysophrys auratus in the North Taranaki Bight,and management implications of these data

A bottom trawl survey was used to determine the position of a nursery ground for snapper, Chrysophrys auratus, in the North Taranaki Bight, New Zealand, and so indicate what area should be protected from potentially harmful fishing techniques. A nursery ground for trevally, Caranx georgianus, was also identified. The growth rate of snapper from the North Taranaki Bight is shown to be much faster than Hauraki Gulf and East Cape stocks, but quite similar to Tasman Bay fish. The onset of sexual maturity appears to be related to fish size rather than age, with about 80% of snapper being mature at a fork length of 25 cm. Recruitment success varies greatly between years, and successful recruitment may be related to warm spring temperatures.     

First record of the Australian ascidian Eudistoma elongatum in northern New Zealand

A colonial ascidian was first reported by marine farmers in Houhora Harbour, Northland, New Zealand in early 2005 and subsequently found on oyster racks in Parengarenga Harbour and the Bay of Islands. The Northland ascidian was identified with a combination of morphological characters and DNA cytochrome c oxidase I (COI) sequence data, as Eudistoma elongatum, a species native to Australia, where it is found from northern New South Wales to Northern Queensland, and distinguished from Eudistoma circumvallatum, the only reported species in this genus from New Zealand. Ascidian larvae are weak dispersers and long distance dispersal of E. elongatum is likely to be enhanced by vectors such as oyster barges and/or movement of cultured oysters. In its native range, E. elongatum is restricted to areas with a minimum winter sea temperature of 16°C. Assuming similar biological limitations apply in New Zealand, the spread of E. elongatum might be restricted to northern New Zealand (north of latitude 37°S).     

Biomass,carbon ingestion,and ammonia excretion by zooplankton associated with an upwelling plume in western Cook Strait,New Zealand

The biomass, elemental composition, and rates of ingestion and excretion by macrozoo‐plankon associated with the upwelling plume off the north‐west coast of the South Island, New Zealand, were investigated in March‐April 1983. Ingestion and excretion rates of the major zoo‐plankton species were combined with abundance data to determine the spatial and temporal variability which may influence phytoplankton dynamics in the plume system. Zooplankton biomass near Cape Kahurangi was dominated by small copepods like Acartia ensifera (up to 60%). In the South Tar‐anaki Bight, larval and adult forms of the euphau‐siid Nyctiphanes australis commonly contributed up to 60% of biomass. However, the carbon ingestion and ammonia excretion patterns of N. australis were spatially displaced from those of the total zooplankton community in the South Taranaki Bight because of higher weight‐specific metabolic rates for the smaller copepods. Close to the focus of the upwelling near the Kahurangi Shoals, grazing pressure on the phytoplankton was high, but as the upwelled water was advected into the Taranaki Bight, carbon production exceeded utilisation by zooplankton. Relatively high rates of ammonia excretion were also associated with peak zooplankton biomass near the Kahurangi Shoals and in the eastern Taranaki Bight.     

Effects of turbidity on the migration of juvenile banded kokopu (Galaxias fasciatus) in a natural stream

Laboratory experiments have shown that the juvenile migratory stage of banded kokopu (Galaxias fasciatus (Gray 1842)) is more sensitive to turbidity than other native fish species and avoids turbidity levels of >25 nephelometric turbidity units (NTU). Field trials using juvenile fish collected from the Tarawera River and Hays Stream, New Zealand, were used to test the results from these laboratory experiments by measuring the effects of turbidity on the migration direction and rate for banded kokopu in a natural stream setting. In the stream setting, neither the migration rate nor the migration direction were affected at turbidity <25 NTU. At higher turbidity levels, significantly fewer fish migrated up stream within a given time period. Because there was rarely any downstream movement, this suggests the fish either halted or slowed their upstream movement. A slower rate of migration could result in fewer juveniles reaching adult habitat, and would account for the reduced abundance of adult banded kokopu in rivers that are turbid during the migration season. Achieving turbidity levels of <25 NTU in rivers and streams during the migration season would therefore help maintain upstream migrations and populations of banded kokopu, and hence other native fish species.     

Variation and taxonomic changes in the family Retropinnidae (Salmonoidea)

The family Retropinnidae contains one monotypic genus, Stokellia, in New Zealand, and nine nominal species of Retropinna: five in New Zealand, three in Australia, and one on Chatham Island. Four Chatham Island populations contain much of the recorded range of variation for the family for head length in standard length ratios, numbers of dorsal and anal rays, and numbers of scale rows. These characters are analysed for 29 populations incorporating five nominal species from New Zealand and Chatham Island. When interrelated these characters are shown to be linked (loosely) and high values are typical of coastal populations. When related to latitude their values increase to the south. The reverse trend is found with increase in altitude. Decrease in salinity depresses the values. Area of the lake habitat has little effect.

Observations suggest that size of fish and numbers of teeth vary predictably. Thus all observed variation is related to environmental conditions. The four nominal lake species are submerged in Retropinna retropinna (Richardson), the type species of the genus, which is considered to be highly adaptable rather than highly variable. R. osmeroides Hector is recognised as distinct from R. retropinna on one character and on sympatric distribution. Records of Australian and Tasmanian species suggest that R. victoriae Stokell differs fundamentally from all other species but that R. semoni Weber and jR. tasmanica McCulloch do not differ greatly from R. retropinna Similar environmentally correlated variation is suggested to relate some diadromous species of Galaxias and their lacustrine isolates.     

Emigrating larvae of koaro,Galaxias brevipinnis Günther (Teleostei: Galaxiidae), from the Otira River,New Zealand

Fish larvae were collected in stream benthic invertebrate drift nets from the Otira River, near Arthur's Pass, New Zealand during a study of benthic drift. They are identified as probably those of koaro (Galaxias brevipinnis Gunther) on the basis of estimates of myomere counts (indicating Galaxiidae or Retropinnidae); by a process of elimination of likely species on the basis of distance up stream, elevation, and habitat characteristics; and by determining fish species in the Otira River tributaries upstream of the sampling location. This comprises the first likely record of emigrating larvae of koaro, a species known to be diadromous by the return migrations from the sea of whitebait juveniles during spring. A newly hatched larva of koaro is described and figured.     

FITC‐conjugated lectins as a tool for differentiating between toxic and non‐toxic marine dinoflagellates

FITC‐conjugated lectins proved to be effective probes for differentiating between morphologically similar dinoflagellate species isolated from New Zealand coastal waters. In particular the binding (fluorescence) of peanut (PNA) lectin differentiated G. mikimotoi from Gymnodinium sp. (Waimangu) and G. pulchellum and the non‐binding of Helix pomatia (HPA) and wheat germ (WGA) lectins discriminated between G. mikimotoi and the other Gymnodinium species tested. G. breve (Florida) was differentiated from the New Zealand isolates by binding with soy bean (SBA) lectin. Ulex europeus (UEA) distinguished the toxic species Alexandrium minutum from the morphologically similar, but non‐toxic, Cachonina hallii. Two strains of Prorocentrum lima (Spain and Rangaunu) were not differentiated by the lectins, but P. lima was differentiated from P. compressum.     

Regime shifts between clear and turbid water in New Zealand lakes: Environmental correlates and implications for management and restoration

We reviewed lakes in New Zealand reported to have undergone regime shifts between macrophyte‐dominated clear water states and de‐vegetated, turbid states. Regime‐shifting lakes (RSLs) occurred along a wide latitudinal gradient. We obtained catchment land‐use data as well as data on the occurrences of introduced (non‐indigenous) macrophytes and herbivorous and benthivorous fish for the 37 RSLs and for 58 lakes with similar maximum depths and climates, but which had not been reported to have undergone regime shifts. All RSLs had a maximum depth <20 m and mean annual surface air temperature between 9 and 16°G Regime shifts were positively related to the percentage of the catchment in pasture and negatively related to the percentage of the catchment in forest. The occurrences of the introduced macrophyte Egeria densa and the introduced fish, Ameiurus nebulosus (catfish), Carassius auratus (goldfish), Scardinius erythrophthalmus (rudd), Cyprinus carpio (koi carp), and Tinca tinca (tench), were significantly correlated to regime shifts in lakes. Although the presence of other introduced aquatic macrophytes was not significantly correlated with RSLs, the number of exotic fish taxa present in lakes was strongly positively correlated with increasing prevalence of regime shifts. The strength of the correlations between land use and introduced species versus regime shifts illustrates a number of factors which could be managed to reduce the susceptibility of lakes to regime shifts and to restore lakes that have become de‐vegetated. Our findings also suggests that regime shifts in lakes were unlikely to have been common in New Zealand lakes before anthropogenic deforestation and introductions of introduced aquatic taxa.     

Further feral poeciliid fish in New Zealand fresh waters,with a key to species

The poeciliid fish, Phalloceros caudimaculatus (commonly referred to as the “caudo"), is recorded from the wild for the first time, occurring in stock‐water troughs on a farm near Kamo in Northland, New Zealand. The populations in the stock troughs reputedly came from a nearby stream c. 10 years ago, although a preliminary search has failed to reveal them to be there now. Presence of an additional exotic fish in New Zealand fresh waters is a matter for concern, and requires management. To facilitate recognition off. caudimaculatus, and its distinction from other poeciliids present here, a diagnosis is provided to enable identification, together with notes on natural history, and a key for the identification of the five species of Poeciliidae now known from natural waters in New Zealand.     

Impact of estuary barrage construction on fish assemblages in the lower part of a river and the role of fishways as a passage

The construction of an estuary barrage, an instream structure in the lower reaches of a river, causes significant physical changes in water flow patterns and river morphology, and results in altered environmental conditions. Here, we examined the impact of the Geum River estuary barrage, completed in 1990, on fish assemblages by using a literature search and fresh surveys of fishways in the barrage. We found that fish assemblages upstream and downstream of the barrage were altered following its completion. After construction, more species were found in the freshwater area, with a particularly great increase in freshwater species. Conversely, estuarine and marine species were only consistently caught in the downstream salt-water area, although the number of species increased. In total, 15,829 fish from 47 species and 20 families were identified at the three types (pool and weir, rubble type, and boat passage) of fishways in the barrage. The dominant species were Chelon haematocheilus, an estuarine species, Coilia nasus, a diadromous species, and Erythroculter erythropterus, a freshwater species. The mean total length of fish (101.9 ± 76.0 mm) in the boat passage fishway was approximately 100 mm lesser than those in the pool and weir (207.2 ± 112.8 mm) and rubble type (205.8 ± 112.7 mm) fishways. The boat passage fishway was the most efficient for fish movements. The current fishway system is not sufficient for fish migration, and thus additional ways are required to improve the system such as the boat passage. Few estuarine or diadromous species were found in both freshwater and salt-water areas, but freshwater fishes that accidently moved to salt-water area actively used fishways. Therefore, fishway management in the Geum River estuary barrage has to focus on freshwater fish; however, this may need to change to a focus on migratory fishes depending on ecological life cycles of migratory fish.     

Comparison and history of Polydora websteri and P. haswelli (Polychaeta: Spionidae) as mud-blister worms in New Zealand shellfish

Shells of commercially valued bivalves in New Zealand, Crassostrea gigas, Perna canaliculus and Pecten novaezelandiae, are damaged by blister-causing Polydora polychaete species known to be close in morphology to the widely recorded oyster pest Polydora websteri Hartman. Recent New Zealand occurrences are here confirmed to relate to two species, P. websteri, and a second similar species, Polydora haswelli Blake & Kudenov, a new record for New Zealand, previously known only from Australia; the two species are described and compared. The worms have limited distributions, with P. websteri confirmed only for Pacific oysters (C. gigas) in northern New Zealand, although prior reports indicate it may also occur on scallops and have reached the northern South Island. Polydora haswelli has been found only in northern New Zealand, occurring on subtidal mussels and scallops and native oysters (Perna canaliculus, Pecten novaezelandiae, Ostrea chilensis), as well as co-existing with intertidal P. websteri on Pacific oysters. The worms are not present in Foveaux Strait O. chilensis beds, a major source of past oyster exports to Australia. The history of mud-blister worm outbreaks in Australasia is examined. While trans-Tasman exports of live oysters from New Zealand were commonplace during the nineteenth century, there is no evidence that mud-blister worms were present in New Zealand then. The earliest reports only date from the early 1970s and only from northern New Zealand, whereas a century earlier in the 1870s at least one of these pest worms had become widespread along eastern Australian coasts.     

Assessment of chemical and physical treatments to selectively kill non-indigenous freshwater zooplankton species

Non-indigenous zooplankton species pose a biosecurity threat to New Zealand’s freshwater native taxa. Nine species are known to have established in New Zealand lakes to date. The spread of some zooplankton taxa is linked to the translocation of farmed fish, principally grass carp (Ctenopharyngodon idella), and recreational vessel movements. The aims of this study were to assess the effectiveness of a range of chemical and physical treatments for transport water and associated equipment to kill freshwater cladoceran, copepod, and rotifer zooplankton species, and their risk to non-target fish. Sodium chloride was the most effective and applicable chemical treatment tested at length in the cladoceran and, combined with physical treatment via mechanical filtration of water or hot water immersion of equipment (to also manage the risk of diapausing eggs), represents an effective option for the control of non-indigenous zooplankton, with limited impact on stenohaline fish.