Phylogeny of the Sepia officinalis species complex in the eastern Atlantic extends the known distribution of Sepia vermiculata across the Benguela upwelling region

Accurate species identification and biogeographic characterisation are fundamental for appropriate management of expanding cephalopod fisheries. This study addresses this topic within the common cuttlefish Sepia officinalis species complex (S. officinalis, S. hierredda and S. vermiculata), with an emphasis on occurrence in African waters. Tissue samples from the currently presumed distributions of S. vermiculata and S. hierredda (from South Africa and Ghana/Angola, respectively) were sequenced for the cytochrome c oxidase subunit I (COI) and the cytochrome b (cytb) genes of the mitochondrial genome and then compared to existing S. officinalis sequences. Three highly divergent and reciprocally monophyletic clades, corresponding to S. officinalis, S. hierredda and S. vermiculata, were resolved, representing the first molecular confirmation of the distinct species status of S. hierredda and S. vermiculata. The sequences also revealed that, contrary to expectations based on presently published information, all samples from southern Angola were S. vermiculata. These results indicate that the range of S. vermiculata extends beyond the currently described northern limit and that S. hierredda and S. vermiculata may be indiscriminately harvested in Angolan waters. Finer-scale patterns within S. vermiculata phylogeography also indicate that the Benguela Current System and/or other environmental factors serve to isolate northern and southern stocks.     

Comparison between the magnetic and petrological characteristics of the peridotites from the gorringe ridge and the peridotites from the mid-ocean ridges

The purpose of our work was to obtain the most possible detailed information about the composition, concentration, and structural features of the magnetic minerals contained in the rock to reveal the differences in the magnetic properties of the peridotites under various circumstances of the mantle magmatism and different conditions of metamorphism. To do this, we examined and analyzed the magnetic and petrographic characteristics of four collections of oceanic and alpinotype spinel peridotites. The main object for comparing the magnetic characteristics was the Gorringe ridge, which lies in the eastern part of the Atlantic Ocean. The peridotite samples from the Gorringe ridge differ from the other collections in many magnetic parameters: I _n , χ, Q, I _rs /I _s , H _c , H _cr , and H _m . The principal question of our work was to clarify the nature of the Earth’s crust where the Gorringe ridge formed. This subject was studied many times in the literature, but the researchers did not reach a common opinion. In accordance with our data, the spinel peridotites from the Gorringe ridge represent a subcontinental lithosphere mantle of the Iberian continental margin. During the metamorphism, the formation of magnetite occurred in the peridotites of the Gorringe ridge in several stages and had a regressive character. Our investigations explain the results of the analysis of the anomalous magnetic field over the Gorringe ridge, which is characterized by sharp roughness and high intensity of the local signchanging anomalies.     

Diversity and distribution of seagrasses in the Union of the Comoros

This study represents the first in situ assessment of seagrasses in the Union of the Comoros. The presence of the following 10 species (ranked in order of abundance) was confirmed: Thalassia hemprichii, Thalassodendron ciliatum, Syringodium isoetifolium, Halodule wrightii, Cymodocea rotundata, Cymodocea serrulata, Halodule uninervis, Halophila ovalis, Zostera capensis and Enhalus acoroides. Seagrasses occurred in large, continuous beds in the shallow waters at the northern and southern tips of Grande Comore Island and around the Bimbini Peninsula on western Anjouan Island, but were sparsely distributed throughout the shallow waters surrounding Mohéli Island.     

渤海西岸多管藻类的形态分类学研究

利用显微观察及生物冷冻切片技术,对采集自河北秦皇岛的多管藻类(Polysiphonia Complex)海藻样品进行形态分类学研究。经鉴定,样品中包括:多管藻属(Polysiphonia)2种:多管藻(Polysiphonia senticulosa Harvey)和丛托多管藻(Polysiphonia morrowii Harvey);新管藻属(Neosiphonia)2种:倾伏新管藻(Neosiphonia decumbens(Segi) Kim et Lee)和球果新管藻(Neosiphonia sphaerocarpa(Børgesen) Kim et Lee),其中丛托多管藻、倾伏新管藻及球果新管藻均为渤海西岸首次记录。本文对样品物种的外部形态及内部结构特征进行了详细描述,并提供了清晰的特征图片。研究结果补充了渤海湾内的藻类资源数据,为多管藻类相关研究提供了分类学参考。     

Numerical modelling of the sea level under the actions of the tide and strong wind in the Bohai Sea

In this paper, the numerical modelling of the tidal level and current in the Bohai Sea was carried out with ADI method, by taking the sum of four main tidal components M2,S2K2,O1 as the open boundary condition. The calculated values were consistent with the predicted ones (the observed values in the case of calm) in the Tidal Table. On the basis of the modelling of the tide, the sea level and current fields under the effects of strong wind were simulated. The calculated results were also quite satisfactory.     

Turbulent structure in the upper layer of the western Equatorial Pacific Ocean

The Richardson number dependence of vertical eddy diffusion coefficients in the western Equatorial Pacific Ocean was examined on the basis of a Microstructure Profiler (MSP) observations during the cruise of Natsushima (JAPACS-89). The Richardson numberR _i was estimated by using the mean shear of velocity profile measured by an Acoustic Doppler Current Profiler (ADCP) with the vertical interval of 15 meters within one or two hours of the each MSP cast. The raw data plot of the vertical eddy diffusion coefficientK _p shows a large scatter with increasing tendency belowR _i =0.5. The relation between the mean vertical eddy diffusion coefficientK _p and the Richardson numberR _i , averaged over every 0.025 in theR _i , supports the model of Pacanowski and Philander (1981) in the range ofR _i >0.5, but coincides with the result of Peterset al. (1988) in the range ofR _i <0.5.     

Monitoring the carbon dioxide mixing ratio in the troposphere and the methane total column over Siberia according to the data of the AIRS and IASI IR sounders

The development of the AIRS (EOS/Aqua) and IASI (MetOp) satellite hyperspectral IR sounders opens new opportunities for determining the average tropospheric carbon dioxide concentration (X_CO2 X_{CO_2 } ) and total methane content (Q_CH4 Q_{CH_4 } ) in the atmosphere from large distances, which is important in climatic studies and since the ground network for CO₂ and CH₄ observations is scarce. The improved scheme for X_CO2 X_{CO_2 } retrieval from the AIRS data, which was used to construct the X_CO2 X_{CO_2 } spatial distribution based on the AIRS data for July 2003 and 2010 covering Siberia, is presented. A similar methodology was also used to retrieve instantaneous X_CO2 X_{CO_2 } values from the cloud-cleared IASI data for July 7, 2008 and the YAK-AEROSIB experimental region. A comparison of the satellite data with quasi-synchronous aircraft observations gives an error of about 2.2 million⁻¹. The iterative physical algorithm was developed in order to retrieve Q_CH4 Q_{CH_4 } . The efficiency of the proposed algorithm was estimated during the experiments with actual IASI data covering the Siberian region during several days in July 2008. The Q_CH4 Q_{CH_4 } estimates were validated by comparing them with the spatially superimposed and quasi-synchronous Q_CH4 Q_{CH_4 } , estimates based on the AIRS data. The standard deviations of both types of estimates are not more than 3%.     

Determination of the surface temperature and the temperature drop in the skin layer from a moving vessel using IR data

In this paper methods are given of the IR radiometric determination of the temperature of the radiating oceanic layer,T _s, and the determination on its basis of the temperature drop in the skin layer,dt, from on board a ship underway, which allows for the emissivity of the sea surface and the contribution of the atmosphere to the upward radiation of the sea surface. The seawater temperatureT _w was registered by a contact sensor towed along the ship at a depth of 0.1–0.4 m. The valuedt=T _s–T _w was found to be within the limits of 0.07 to –0.85 K, being on average 0.33 K. The near-surface wind speedv (v=1–13 m s^–1) had the best relationship withdt;dt=–0.66+0.06v. The empirical values ofdt were compared with the model ones obtained by the well-known formulae for the conditions of forced and free convection of the surface layer.Translated by Mikhail M. Trufanov.     

A note on the extremal properties of the morison equation

The extremal properties of the Morison equation F(t) = X′(t) + X(t)|X(t)|; for the force on a circular pile in a fluid, are derived by means of a Slepian model for the behaviour of X(t) around its local maxima. The behaviour of X′(t) near large maxima of X(t) is almost deterministic, and hence there is a simple relation between the maxima in X(t) and those in F(t).     

Diurnal changes in the bio-optical properties of the phytoplankton in the Alborán Sea (Mediterranean Sea)

The changes in the phytoplankton absorption properties during a diurnal cycle were investigated at one station located in the north-western area of the Alborán Sea. The experiment was performed in spring when the water column was strongly stratified. This hydrological situation permitted the establishment of a deep chlorophyll a (chl a) fluorescence maximum (DFM) which was located on average close to the lower limit of the mixed layer and the nutricline. The relative abundance of pico-phytoplankton (estimated as its contribution to the total chl a) was higher in the surface, however, micro-phytoplankton dominated the community at the DFM level. Chl a specific absorption coefficient (a*(λ)) also varied with optical depth, with a* (the spectrally average specific absorption coefficient) decreasing by 30% at the DFM depth with respect to the surface. A significant negative correlation between the contribution of the micro-phytoplankton to the total chl a and a* was obtained indicating that a* reduction was due to changes in the packaging effect. Below the euphotic layer, a* increased three-fold with respect to the DFM, which agrees with the expected accumulation of accessory pigments relative to chl a as an acclimation response to the low available irradiance. The most conspicuous change during the diurnal cycle was produced in the euphotic layer where the chl a concentration decreased significantly in the afternoon (from a mean concentration of 1.1 μg L⁻¹ to 0.7 μg L⁻¹) and increased at dusk when it averaged 1.4 μg L⁻¹. In addition, a* and the blue-to-red absorption band ratio increased in the afternoon. These results suggest that a*(λ) diurnal variability was due to increase in photo-protective and accessory pigments relative to chl a. The variation ranges of a*(λ) at 675 and 440 nm (the absorption peaks in the red and blue spectral bands, respectively) in the euphotic layer were 0.01–0.04 and 0.02–0.10 m² mg⁻¹ chl a, respectively. Approximately 30% out of this variability can be attributed to the diurnal cycle. This factor should therefore be taken into account in refining primary production models based on phytoplankton light absorption.     

Spatial variability of the species composition,abundance, and productivity of the phytoplankton in the white sea in the late summer period

The species composition, cell concentration (N), and biomass (B) of the phytoplankton, as well as the chlorophyll a (Chl a) concentration, primary production (PP), and the concentrations of the dissolved inorganic micronutrients (phosphorus, silica, nitrogen as nitrite), were estimated for Kandalaksha Bay (KB), Dvina Bay (DB), and the basin (Bas) of the White Sea in August of 2004. The micronutrient concentrations were lower compared to the average long-term values for the summer period. The Chl a concentration varies from 0.9 to 2.0 mg/m³ for most of the studied areas, reaching up to 7.5 mg/m³ in the Northern Dvina River estuary. The surface water layer of the DB was the most productive area, where the PP reached up to 270–375 mg C/(m³ day). The phytoplankton biomass varied from 11 to 205 mg C/m³ with the highest values observed in the Bas and DB. Three groups of stations were defined during the analysis of the phytoplankton’s species composition similarity. The dinoflagellates Dinophysis norvegica and Ceratium fusus were particular to the phytoplankton assemblages in the KB; the diatom Ditylum brightwellii was particular to the upper and central parts of the DB. These three phytoplankton species were less abundant in the Bas.     

Changes in the macrobenthic communities of the Gudauta Oyster Bank

Twenty-nine benthic invertebrate species were registered for the Gudauta Bank in the depth range of 8–32 m in 1990. The shallow-water biocenose was defined for the depths of less than 10 m, the biocenoses of Anadara inaequivalvis and A. inaequivalvis-Upogebia pusilla occupied the depths of 10–30 m; and the biocenosis of Pitar rudis was found for the depths of more than 30 m. The highest biodiversity and abundance of benthos was registered for the Anadara biocenoses, while the lowest, for the shallow-water ones. It was found that significant changes in the benthic communities took place in the forty years after the predator gastropod Rapana venosa was introduced into the Black Sea. The oysters became extinct on Gudauta Bank, and the species composition of the benthic community has been significantly depleted. Alien species of Anadara and Rapana became the most abundant by biomass, comprising more than 80% of the total biomass of the benthos. The population density of Rapana constituted 12 ind./m² and was the highest ever registered for the studied areas of the Black Sea. Insufficient nutrition preconditioned the small size of the mollusks.     

Quantitative distribution of the starfish in some bays of the far east

The quantitative distribution of the starfish was analyzed in Vostok Bay, Nakhodka Bay, and Kievka Bay (the Sea of Japan). Nine species were found. Three species of Asteroidea dominated (Asterina pectinifera, Asterias amurensis, and Leptasterias sp.). The population density of A. pectinifera and A. amurensis was higher in the shallow waters compared to the sublittoral zone. The frequency of the occurrence, the biomass, and the population density of Leptasterias sp. were the highest for the shallow waters and decreased accordingly when the water temperature decline on the transect from Vostok Bay to Kievka Bay. In Kievka Bay, which was characterized by the lowest water temperatures, Leptasterias sp. dominated in the littoral and sublittoral zones followed by A. pectinifera and A. amurensis.     

Ecological consequence of the introduction of the polychaete Marenzelleria cf. viridis into a shallow-water biotope of the northern Baltic Sea

Effects of the North American polychaete Marenzelleria cf. viridis on a simple shallow-water benthic community of the northern Baltic Sea were studied in a field experiment combining natural densities of dominating macrofaunal species. The presence of M. cf. viridis increased benthic production (chlorophyll a) and reduced the survival of the native polychaete Nereis diversicolor. Adult Macoma balthica caused a significant mortality on M. cf. viridis whereas adult Cerastoderma glaucum had no effect on M. cf. viridis. We suggest that the competitive interactions between M. cf. viridis and M. balthica are a possible key factor determining the distribution pattern of M. cf. viridis in the Baltic Sea.     

Evaluating the genetic effects of the invasive Ocenebra inornata on the native oyster drill Ocenebra erinacea

Studies focusing on the effect of invasive species on the genetic diversity of native marine invertebrates remain scant. Here we report diversity among French populations of the intertidal gastropod Ocenebra erinacea (Linnaeus, 1758) sampled in the presence and absence of the invasive Ocenebra inornata (Recluz, 1851). Between 1999 and 2004, a total of 352 individuals of O. erinacea was collected from 15 sites (five of which had the invasive present) and was genotyped at the mitochondrial locus Cytochrome Oxidase 1 (cox1). No statistical difference was observed between polymorphism levels recorded within native populations exposed to the invasive, compared with populations sampled in the absence of O. inornata. No sign of native population decline was detected in response to the invader. While significant shifts in native O. erinacea population sizes have previously been reported in the literature, genetic effects may take longer to accumulate, or may be undetectable without a larger panel of genetic markers. By contrast, large genetic distances and significant population differentiation were recorded between Atlantic and Mediterranean O. erinacea samples, suggesting that these populations have distinct evolutionary histories. Comparison of genetic divergence within the closely related genus Nucella suggests that the Atlantic populations of O. erinacea and those from Thau Lagoon in the Mediterranean may belong to different species or subspecies.     

The reliability of the thermodynamic constants for the dissociation of carbonic acid in seawater

Laboratory measurements of all four CO₂ parameters [f_CO2 ( = fugacity of CO₂), pH, TCO₂ ( = total dissolved inorganic carbon), and TA ( = total alkalinity)] were made on the same sample of Gulf Stream seawater (S = 35) as a function of temperature (5–35 °C) and the ratio of TA/TCO₂ (X) (1.0–1.2). Overall the measurements were consistent to ±8 μ atm in f_CO2, ± 0.004 in pH, ± 3 μ mol kg⁻¹ in TCO₂, and ± 3 μ mol kg⁻¹ in TA with the thermodynamic constants of Goyet and Poisson (1989), Roy et al. (1993), and Millero (1995). Deviations between the measured pH, TCO₂, TA and those calculated from various input combinations increase with increasing X when the same constants are used. This trend in the deviations indicates that the uncertainties in pK₂ become important with increasing X (surface waters), but are negligible for samples with the lower X (deep waters). This trend is < 5 μ mol kg⁻¹ when the pK₂ values of Lee and Millero (1995) are used.The overall probable error of the calculated f_CO2 due to uncertainties in the accuracy of the parameters (pH, TCO₂, TA, pK₀, pk₁, and pK₂) is ± 1.2%, which is similar to the differences between the measured values and those calculated using the thermodynamic constants of Millero (1995).The calculated values of pK₁, (from f_CO2-TCO₂-TA) agree to within ± 0.004 compared to the results of Dickson and Millero (1987), Goyet and Poisson (1989), Roy et al. (1993), and Millero (1995) over the same experimental conditions. The calculated values of pK₂ (from pH-TCO₂-TA) are in good agreement (± 0.004) with the results of Lee and Millero (1995) and also in reasonable agreement (± 0.008) with the results of Goyet and Poisson (1989), Roy et al. (1993), and Millero (1995). The salinity dependence of our derived values of pK₁ and pK₂, (S = 35) can be estimated using the equations determined by Millero (1995).     

东海、黄海底层鱼类数量分布季节变化的因子分析

根据2000年春(4月)、夏(6月)、秋(9月)、冬(12月)四季东海、黄海底拖网鱼类资源调查资料,使用因子分析的方法分析了该海域鱼类数量分布的季节变化特征。R型分析发现,春季关系最密切的鱼种有4种:斑鳐、凤鲚、海鳗和黑鳃梅童鱼;夏季有5种:鳀、小黄鱼、黄鮟鱇、绿鳍鱼和长蛇鲻;秋季也有5种:带鱼、灰鲳、虻鲉、日本鲭和小黄鱼;冬季有3种:带鱼、鳄齿鱼和发光鲷。历史资源调查证实,夏季的这5个鱼种之间以摄食与被摄食关系为主。进一步分析发现,各季节关系密切的鱼种所聚集分布的水域,正是这些鱼种各季对应的生理周期洄游分布的主要水域。根据Q型分析可以得到各季的综合优势鱼种及其优势分布水域,发现带鱼和小黄鱼是东海、黄海渔业资源的绝对优势鱼种,除了带鱼、小黄鱼以外,其他的综合优势鱼种都是一些价值较低的、生长速度较快的小型鱼类。     

Measurements of the Turbulent Energy Dissipation Rate around the Shelf Break in the East China Sea

Using the micro-structure profiler, TurboMAP, large values for the turbulent energy dissipation rate ε were found just above the bottom of the shelf and around the thermocline near the continental shelf break in the East China Sea. The values found above the bottom are produced by the bottom stress due to tidal currents, resulting in a distinct bottom mixed layer where the vertical eddy diffusivity Kz is also large. Distinct maxima in the values of ε detected around the thermocline are located at the depth of the fine-scale shear maxima detected with the moored ADCP. The vertical profiles of ε were compared with those of the current velocity, and it was found that the maxima in ε appear to correspond to those of the shear with fine scale. The magnitude of the observed ε coincided approximately with the ε calculated from the fine-scale shear and the buoyancy frequency according to the parameterization proposed by Gregg (1989), if the large-scale mean shear caused by the Kuroshio is subtracted. However, it is not clear whether the parameterization for the internal wave fields in the open ocean is applicable to the estimation of ε in the shelf break. Whereas the most predominant value of ε was found just above the bottom and around the thermocline, the maxima of ε could be found in the internal area. They could have been caused by the propagation of the vertically high wave number internal tides along the characteristic ray.     

Assimilated carbon budget for the hyperiid amphipodThemisto japonica (bovallius) from the Japan sea as influenced by temperature

Using a growth model based on moult number, the assimilated carbon budget was constructed forThemisto japonica growing from the specimens just released from the marsupium to mature adults at 1–15°C. As budget parameters, growth (G), metabolism (Me), moult (Mo), and reproduction (Re) were measured and assimilation (A) was estimated as the sum of these four parameters (A=G+Me +Mo +Re). The results of the lifetime budget indicated that among these parameters the greatest allocation ofA was toMe (70–83%). Lifetime expenditure of carbon forMe was the least at 7°C, andMe increased with either increase or decrease of the temperature from 7°C. A female grown to full adult size at 7°C invested 16.6 % forG, 70.2% forMe, 2.1% forMo, and 11.1% forRe of totalA. General features seen in the partition ofA toG, Me, Mo, andRe forT. japonica are similar to those of other planktonic crustaceans being reported. Considering the profound effect of temperature on the assimilated carbon budget, practical problems in defining the representative habitat temperature for diel vertical migrators likeT. japonica in the field are discussed.     

Distribution depth of the transforming stage larvae of myctophid fishes in the subtropical–tropical waters of the western North Pacific

We describe the day–night vertical distribution patterns of 18 species or types of myctophid fish larvae at the transforming stage based on discrete depth sampling from the surface down to 1000-m depth in the subtropical–tropical western North Pacific. A total of 551 transforming stage larvae were collected at the 19 sampling stations. Except for the Diaphus species and Notolychnus valdiviae, all of the transforming stage larvae (including genera Benthosema, Bolinichthys, Centrobranchus, Ceratoscopelus, Diogenichthys, Hygophum, Lampanyctus, Lobianchia, Myctophum, Symbolophorus, and Triphoturus) were collected in the lower mesopelagic zone from 600- to 900-m depth during both day and night, showing no diel vertical migration (DVM). On the contrary, the Diaphus species and N. valdiviae larvae undergo DVM during the transforming stage, occurring below 200-m layer during the daytime and migrating up to the upper 150-m layer at night, i.e., they show earlier adaptation to juvenile–adult behaviors. Most myctophid fish larvae are known to undertake substantial ontogenetic vertical migration (OVM) from the epipelagic to mesopelagic zones during their early life stage. Although considerable sampling effort was carried out in this study, transforming larvae, except for the above two migratory ones, were not collected in the epipelagic and upper mesopelagic zones, strongly suggesting that their sinking speed would be high. It would be advantageous for survival to spend their highly vulnerable transforming stage in the lower mesopelagic zone, where predation pressures are lower and physical conditions are more stable than in the upper layers.