The Role of Protistan Microzooplankton in the Upper San Francisco Estuary Planktonic Food Web: Source or Sink?

Decline of native pelagic species in estuarine systems is an increasing problem, especially for native fishes in the San Francisco Estuary and Delta (SFE-D). Addressing these losses depends on understanding trophodynamics in the food web that supports threatened species. We quantified the role of microzooplankton (heterotrophic–mixotrophic protists <200 μm) in the food web of the upper SFE-D. We sampled protist plankton abundance and composition at two sites (Suisun Bay and Grizzly Bay) approximately monthly from February 2004 to August 2005 and conducted dilution experiments during spring and summer of both years in Suisun Bay. Heterotrophs dominated the protist community in Suisun Bay and Grizzly Bay, particularly in the <20 μm size range, and peaks in protistan microzooplankton biomass were associated with high phytoplankton biomass. In both years, microzooplankton grazing rates were high (0.5–0.7 day⁻¹) during the spring and lower (~0.2 day⁻¹) during summer. Phytoplankton growth rates peaked in April 2004 (~0.7 day⁻¹) but were much lower (<0.1 day⁻¹) in spring 2005, despite relatively high abundance. Thus, microzooplankton grazing consumed as much as 73% of phytoplankton standing stock during spring and ~15% of standing stock during summer of both years. Combined with earlier results, we conclude that microzooplankton can be important mediators of carbon and energy flow in the upper SFE-D and may be a “source” to the metazoan food web.     

Changes in plankton community structure and function in response to variable freshwater flow in two tributaries of the Chesapeake Bay

The biomass of phytoplankton, microzooplankton, copepods, and gelatinous zooplankton were measured in two tributaries of the Chesapeake Bay during the springs of consecutive dry (below average freshwater flow), wet (above average freshwater flow), and average freshwater flow years. The potential for copepod control of microzooplankton biomass in the dry and wet years was evaluated by comparing the estimated grazing rates of microzooplankton by the dominant copepod species (Acartia spp. andEurytemora affinis) to microzooplankton growth rates and by calculating the percent of daily microzooplanton standing stock removed through copepod grazing. There were significant increases in phytoplankton and copepod biomass, but not for microzooplankton biomass in the wet year as compared to the dry year. The ctenophoreMnemiopsis leidyi was present during the dry year but was absent during the sampling period of the wet and average freshwater flow years. Grazing pressure on microzooplankton was greatest in the wet year, withAcartia spp. andE. affinis ingesting 0.21–2.64 μg of microzooplankton C copepod⁻¹ d⁻¹ and removing up to 60% of the microzooplankton standing stock per day. In the dry year, these copepod species ingested 0.10–0.73 μg of microzooplankton C copepod⁻¹ d⁻¹ with a maximum daily removal of approximately 3% of the microzooplankton standing stock. Potential copepod grazing pressure was significantly less than microzooplankton growth in the dry year, but was equivalent to microzooplankton growth in the wet year, implying strong top-down control of the microzooplankton community in the wet year. These results suggest that increased grazing control of microzooplankton populations by more copepods in the wet year released top-down control of phytoplankton. Reduced microzooplankton grazing, in conjunction with increased nutrient availability, resulted in large increases in phytoplankton biomass in the wet year. Increased freshwater flow has the potential to influence trophic cascades and the partitioning of plankton production in estuarine systems.     

海洋浮游生态系统中小型浮游动物的生态功能

小型浮游动物在海洋生态系统中的作用,主要指有多少能量通过小型浮游动物传递到桡足类,从而比较沿"浮游植物→中型浮游动物"和"浮游植物+细菌→小型浮游动物→中型浮游动物"两条食物链到达中型浮游动物的能流大小.为达到这个目的,需要研究各个能流路径的传递效率,即能量在各个营养级(初级生产--小型浮游动物,细菌生产--小型浮游动物,小型浮游动物的生长率,小型浮游动物--中型浮游动物)的传递效率.综述了国内外对上述营养级传递效率的研究现状,以期为我国的同类研究提供参考.浮游植物初级生产力被小型浮游动物摄食的比例平均为每天60%～75%,大大高于桡足类对浮游植物初级生产力的摄食压力每天10%.海洋浮游细茵的二次生产力相当于初级生产力的30%.其中80%～180%被小型浮游动物摄食.小型浮游动物的毛生长率为30%～40%,生产力是初级生产力的21%～34%.在西班牙西北部沿海,桡足类每天摄食2%～51%小型浮游动物生产力.因此,桡足类通过微食物网摄食的能量是初级生产力的0.4%～17%,与桡足类摄食初级生产的10%处于同一量级.不考虑碎屑提供的能流,小型浮游动物对桡足类饵料的贡献为20%以上,甚至可高达50%.     

Chronic food limitation of egg production in populations of copepods of the genusAcartia in the San Francisco estuary

Egg production of planktonic copepods, is commonly measured as a proxy for secondary production in population dynamics studies and for quantifying food limitation. Although limitation of copepod egg production by food quantity or quality is common in natural waters, it appears less common or severe in estuaries where food concentrations are often high. San Francisco Estuary, California, has unusually low concentrations of chlorophyll compared to other estuaries. We measured egg production rates of three species ofAcartia, with dominate the zooplankton biomass at salinity above 15 psu, on 36 occasions during 1999–2002. Egg production was determined by incubating up to 40 freshly collected individual copepods for 24 h in 140 ml of ambient water. Egg production was less than 10 eggs female⁻¹ d⁻¹ most of the year, but as high as 52 eggs female⁻¹ d⁻¹ during month-long spring phytoplankton blooms. Egg production was a saturating function of total chlorophyll concentration with a mean of 30 eggs female⁻¹ d⁻¹ above a chlorophyll concentration of 12±6 mg chl m⁻³. We take chlorophyll to be a proxy for total food ofAcartia, known to feed on microzooplankton as well as phytoplankton. These findings, together with long-term records of chlorophyll, concentration and earlier studies of abundance of nauplius larvae in the estuary, imply chronic food limitation ofAcartia species, with sufficient food for maximum egg production <10% of the time over the last 25 yr. These results may show the most extreme example of food limitation of copepod reproduction in any temperate estuary. They further support the idea that estuaries may provide suitable habitat forAcartia species by virtue of other factors than high food concentration.     

Shifts in Zooplankton Community Structure: Implications for Food Web Processes in the Upper San Francisco Estuary

Zooplankton are an important trophic link and a key food source for many larval fish species in estuarine ecosystems. The present study documents temporal and spatial zooplankton dynamics in Suisun Bay and the Sacramento–San Joaquin Delta—the landward portion of the San Francisco Estuary (California, USA)—over a 37-year period (1972–2008). The zooplankton community experienced major changes in species composition, largely associated with direct and indirect effects of introductions of non-native bivalve and zooplankton species. A major clam invasion and many subsequent changes in zooplankton abundance and composition coincided with an extended drought and accompanying low-flow/high-salinity conditions during 1987–1994. In the downstream mesohaline region, the historically abundant calanoid copepods and rotifers have declined significantly, but their biomass has been compensated to some extent by the introduced cyclopoid Limnothoina tetraspina. The more upstream estuary has also experienced long-term declining biomass trends, particularly of cladocerans and rotifers, although calanoid copepods have increased since the early 1990s due to the introduced Pseudodiaptomus spp. In addition, mysid biomass has dropped significantly throughout the estuary. Shifts in zooplankton species composition have also been accompanied by an observed decrease in mean zooplankton size and an inferred decrease in zooplankton food quality. These changes in the biomass, size, and possibly chemical composition of the zooplankton community imply major alterations in pelagic food web processes, including a drop in prey quantity and quality for foraging fish and an increase in the importance of the microbial food web for higher trophic levels.     

Short-Term and Interannual Variability in Primary Production in the Low-Salinity Zone of the San Francisco Estuary

We measured primary production during spring?Csummer 2006?C2007 to determine the carbon supply to the low-salinity pelagic food web of the San Francisco Estuary (SFE). Weekly or biweekly samples were taken at three stations of fixed salinity for size-fractionated primary production and biomass, both as chlorophyll and from biovolume based on counts. Error variance in productivity estimates arose mainly from the depth integration of ¹⁴C uptake, showing the importance of productivity measurements at high light levels for estimates of depth-integrated production. Temporal and spatial variability in production were surprisingly small. Combining data from this study with long-term monitoring data, productivity and biomass were variable in time and salinity but without persistent patterns and with infrequent blooms. Production within the low-salinity zone was unresponsive to variation in freshwater flow, in contrast to findings in other estuaries where nutrient loading drives variability in production and other regions of the SFE where production responds to residence time or to stratification. Estimated annual primary production was only 25 and 31?g?C?m^?2?year^?1 during 2006 and 2007, only half of it in cells >5???m. These results imply that phytoplankton provided poor food web support for higher trophic levels, probably contributing to the long-term decline in fish abundance in the brackish to freshwater region of the estuary.     

Long-Term Seasonal Trends in the Prey Community of Delta Smelt (<Emphasis Type="Italic">Hypomesus transpacificus</Emphasis>) Within the Sacramento-San Joaquin Delta,California

Abiotic factors and species introductions can alter food web timing, disrupt life cycles, and change life history expressions and the temporal scale of population dynamics in zooplankton communities. We examined physical, trophic, and zooplankton community dynamics in the San Francisco Estuary, California, a highly altered Mediterranean climate waterway, across a 43-year dataset (1972–2014). Before invasion by the suspension-feeding overbite clam (Potamocorbula amurensis) in the mid-1980s, the estuary demonstrated monomictic thermal mixing in which winter turbidity and cool temperatures contributed to seasonally low productivity, followed by a late-spring-summer clearing phase with warm water and peak phytoplankton blooms that continued into early winter. Following the clam invasion, we observed a shift in peak phytoplankton bloom timing, with peak productivity now occurring in May compared to June prior to the invasion. Peak abundance of several zooplankton taxa (Eurytemora affinis, Pseudodiaptomus, other calanoids, and non-copepods) also shifted to earlier in the season. We present the first evidence of a shift in the timing of peak abundance for zooplankton species that are key prey items of delta smelt (Hypomesus transpacificus), a federally threatened pelagic fish species. These timing shifts may have exacerbated well-documented food limitations of delta smelt due to declines in primary productivity since the invasion of the overbite clam. Future conservation efforts in the estuary should consider measures designed to restore the timing and magnitude of pre-invasion phytoplankton blooms.     

Reevaluating the Generality of an Empirical Model for Light-Limited Primary Production in the San Francisco Estuary

Depth-integrated primary production (??P, in grams of carbon per square meter per day) was measured using ¹⁴C in the northern San Francisco Estuary (SFE) from March through August of 2006 and 2007. Determinations of ??P were then used to calibrate a published light-utilization model that relates ??P to a composite parameter of chlorophyll, solar irradiance, and photic zone depth. The resultant calibration coefficient, ??, varied by a factor of nearly two between 2006 and 2007 and was lower than determined in previous calibrations for the estuary. The now chronically low chlorophyll concentrations in the SFE have resulted in lower predictive power of the light-utilization model. The variation in ?? was likely the result of interannual variation in phytoplankton assimilation number. These results suggest that using a single ?? may yield large errors in estimated estuarine production when applied overbroad spatial and temporal scales. Given the food-limited condition of the SFE, it appears that direct measurements of primary production are necessary for accurately characterizing the base of the estuarine food web.     

Phytoplankton biomass, cell diameter, and species composition in the low salinity zone of Northern San Francisco Bay estuary

Phytoplankton chlorophyll a concentration, biovolume, cell diameter, and species composition differed across the narrow, low salinity zone between 0.6‰ to 4‰ and may influence copepod food availability in the northern San Francisco Bay Estuary. The highest chlorophyll a concentrations (range 3.2–12.3 μg 1^?1), widest cell diameters (>5 μm diam), highest diatom densities and highest production rates of >10 μm diam cells occurred at the landward edge of the salinity zone in April during a strong spring tide and May during a strong neap tide. Near optimum predator/prey ratios, large prey estimated spherical diameters, and high chlorophyll a concentrations suggest these phytoplankton communities provided good food quantity and quality for the most abundant copepods, Eurytemora affinis, Sinocalanus doerrii, and Pseudodiaptomus forbesi. At the center of the zone, chlorophyll a concentrations, diatom densities, and production rates of >10 μm diam cells were lower and cell diameters were smaller than upstream. Downstream transport was accompanied by accumulation of phytoplankton with depth and tide; maximum biomass occurred on spring tide. The lowest chlorophyll a concentrations (1.4–3.6 μg 1^?) and consistently high densities (3,000–4,000 cells ml^?1) of <5 μm diam cells occurred at the seaward edge of the zone, where the green alga Nannochloris spp. and the bluegreen alga Synechococcus spp. were the most abundant phytoplankton. Low chlorophyll a concentrations and production rates of >10 μm diam cells, small prey estimated spherical diameters, and high predator/prey ratios suggested the seaward edge of the zone had poor phytoplankton food for copepodids and adult copepods. The seaward decrease in phytoplankton chlorophyll a concentration and cell diameter and shift in species composition in the low salinity zone were probably a function of an estuary-wide decrease in chlorophyll a concentration, cell diameter, and diatom density since the early 1980s that was enhanced in the low salinity zone by clam herbivory after 1987. *** DIRECT SUPPORT *** A01BY090 00008     

Seasonal Factors Influencing Copepod Abundance in the Maryland Coastal Bays

Maryland Coastal Bays differ in hydrography from river-dominated estuaries because of limited freshwater inflow from tributary creeks and more marine influence. Consequently, the copepod community structure may be different from that of the coastal ocean and river-dominated estuaries in the mid-Atlantic region. A 2-year study was conducted to describe copepod species composition and seasonal patterns in abundance and factors influencing the community structure. Seven copepod genera, Acartia, Centropages, Pseudodiaptomus, Parvocalanus, Eurytemora, Oithona, and Temora, in addition to harpacticoids were found. The copepod community was dominated by Acartia spp. (64%), followed by Centropages spp. (30%), unlike in river-dominated estuaries in the region where the copepod community is usually dominated by Acartia spp. followed by Eurytemora affinis. Acartia tonsa was the most abundant in summer and fall whereas Centropages spp., Temora sp., Oithona similis, E. affinis, and harpacticoids were most abundant in winter and early spring. Parvocalanus crassirostris and Pseudodiaptomus pelagicus were present in fall and winter but at relatively low densities. The highest mean density of copepods occurred in winter 2012 (36,437 m^?3) and the lowest in spring 2013 (347 m^?3). Low densities occurred through early summer (614 m^?3) coinciding with peak spawning by bay anchovy (Anchoa mitchilli). Bottom-up control via low phytoplankton biomass coupled with top-down control by ctenophores (Mnemiopsis sp.), mysids (Neomysis americana), and bay anchovy was probably responsible for the low copepod densities in spring and early summer. Temperature and salinity were also important factors that influenced the seasonal patterns of copepod species occurrence. The observed seasonal differences in the abundance of copepods have important implications for planktivorous fishes as they may experience lower growth rates and survival due to food limitation in spring/early summer when copepod densities are relatively low than in late summer/fall when copepod abundance is higher.     

Zooplankton abundance and community structure in a mesohaline North Carolina estuary

The lower Neuse River Estuary is a temperate mesohaline system which forms the major southern tributary of Pamlico Sound, North Carolina. The crustacean zooplankton of this well-mixed system were sampled for a 20-month period from May 1988 through December 1989. A submersible pump was used to sample both the entire water column and the sediment surface. Seasonal dominants included the calanoid copepodsAcartia tonsa andParacalanus crassirostris in summer, the cyclopoid copepodOithona colcarva in fall, the cladoceranPodon polyphemoides in winter, and harpacticoid copepods in spring. Non-naupliar biomass over the study period consisted of 38.8%A. tonsa, 7.7%P. crassirostris, 21.2%O. colcarva 23.6% harpacticoid copepods, and 6.0% cladocerans. The remainder of the biomass consisted ofPseudodiaptomus coronatus and barnacle nauplii. Mean total copepod densities ranged from 600 m^?3 in May 1988 to 180,000 m^?3 in August 1988. Mean copepod densities for 1989 were 25,000 m^?3. Maximum densities during both years occurred during summer, with subsequent descreases throughtout the year until early spring. Abundances of total copepods, and ofAcartia tonsa in particular, were significantly correlated with water temperature, but with neither chlorophylla, phytoplankton productivity, nor any of an array of other physical or chemical variables. Regression analyses using data from this investigation, and supported by results from other regional studies, indicate that water temperature is likely the single most important variable predicting zooplankton temporal abundance in North Carolina estuaries.     

Macrozooplankton and micronekton of the lower San Francisco estuary: Seasonal, interannual, and regional variation in relation to environmental conditions

Macrozooplankton and micronekton are intermediaries linking lower trophic levels (e.g., phytoplankton and mesozooplankton) to higher ones (e.g., fishes and birds). These organisms have not been extensively studied in the San Francisco Estuary (SFE), California. The objective of this study was to determine the distribution and abundance of macrozooplankton and micronekton in the SFE and to describe how these vary seasonally, interannually, and regionally in relation to environmental variables. Water column macrozooplankton and micronekton were sampled monthly from September 1997 to December 2000 at 6 stations spanning North, Central, and South Bays using a Methot Trawl. The macrozo oplankton and micronekton in the lower SFE were dominated by 4 fishes and 7 invertebrates that comprised 98% of the total catch. Correspondence analyses revealed 4 groups of species that exhibited similar patterns of distribution and abundance. The assemblages changed between the wet and dry seasons and with distance from the coastal ocean. Based on abundance patterns, the dominant taxa in the lower SFE can be classified as: organisms spawned from common members of neritic assemblages that use mostly North Bay and that are abundant during the dry season (Clupea pallasi, Spirinchus thaleichthys, Porichthys notates); estuarine-dependent organisms with broad distributions in the estuary year-round (Crangon franciscorum, Crangon nigricauda, Engraulis mordax); resident species remaining within the estuary but occurring mostly in South Bay during the wet season (Palaemon macrodactlyus, Synidotea laticauda, Neomysis kadiakensis); and gelatinous species (Pleurobrachia bachei, Polyorchis spp.) occuring in all three bays with a single peak in abundance in December and January in North and South Bays. The variation in distribution, abundance, and composition of macrozooplankton and micronekton was related to life history strategies, distance from the coastal ocean, and season.     

Selenium in San Francisco Bay zooplankton: Potential effects of hydrodynamics and food web interactions

The potential toxicity of elevated selenium (Se) concentrations in aquatic ecosystems has stimulated efforts to measure Se concentrations in benthos, nekton, and waterfowl in San Francisco Bay (SF Bay). In September 1998, we initiated a 14 mo field study to determine the concentration of Se in SF Bay zooplankton, which play a major role in the Bay food web, but which have not previously been studied with respect to Se. Monthly vertical plankton tows were collected at several stations throughout SF Bay, and zooplankton were separated into two operationally defined size classes for Se analyses: 73–2,000 μm, and ≥2,000 μm. Selenium values ranged 1.02–6.07 μg Se g^?1 dry weight. No spatial differences in zooplankton Se concentrations were found. However, there were inter- and intra-annual differences. Zooplankton Se concentrations were enriched in the North Bay in Fall 1999 when compared to other seasons and locations within and outside SF Bay. The abundance and biovolume of the zooplankton community varied spatially between stations, but not seasonally within each station. Smaller herbivorous-omnivorous zooplankton had higher Se concentrations than larger omnivorous-carnivorous zooplankton. Selenium concentrations in zooplankton were negatively correlated with the proportion of total copepod biovolume comprising the large carnivorous copepodTortanus dextrilobatus, but positively correlatid with the proportion of copepod biovolume comprising smaller copepods of the family Oithonidae, suggesting an important role of trophic level and size in regulating zooplankton Se concentrations.     

Organic Matter Sources Supporting Lower Food Web Production in the Tidal Freshwater Portion of the York River Estuary, Virginia

The Mattaponi River is part of the York River estuary in Chesapeake Bay. Our objective was to identify the organic matter (OM) sources fueling the lower food web in the tidal freshwater and oligohaline portions of the Mattaponi using the stable isotopes of carbon (C) and nitrogen (N). Over 3 years (2002–2004), we measured zooplankton densities and C and N stable isotope ratios during the spring zooplankton bloom. The river was characterized by a May–June zooplankton bloom numerically dominated by the calanoid copepod Eurytemora affinis and cladocera Bosmina freyi. Cluster analysis of the stable isotope data identified four distinct signatures within the lower food web: freshwater riverine, brackish water, benthic, and terrestrial. The stable isotope signatures of pelagic zooplankton, including E. affinis and B. freyi, were consistent with reliance on a mix of autochthonous and allochthonous OM, including OM derived from vascular plants and humic-rich sediments, whereas macroinvertebrates consistently utilized allochthonous OM. Based on a dual-isotope mixing model, reliance on autochthonous OM by pelagic zooplankton ranged from 20% to 95% of production, declining exponentially with increasing river discharge. The results imply that discharge plays an important role in regulating the energy sources utilized by pelagic zooplankton in the upper estuary. We hypothesize that this is so because during high discharge, particulate organic C loading to the upper estuary increased and phytoplankton biomass decreased, thereby decreasing phytoplankton availability to the food web.     

Zooplankton grazing in a Potomac River cyanobacteria bloom

During summer, bloom-forming cyanobacteria, including Anacystis, Aphanizomenon, and Microcystis aeruginosa, dominate tidal-fresh waters of the upper Potomac River estuary with densities exceeding 10⁸ cells l^?1. In an attempt to determine the importance of these high cyanobacteria densities to planktonic herbivory in the system, short-term grazing experiments were conducted in July and August 1987. Using size-fractionated river phytoplankton assemblages, zooplankton grazing rates were determined for dominant or subdominant planktonic microzooplankton and mesozooplankton feeding on ¹⁴C-labeled river assemblages, ¹⁴C-labeled river assemblages enriched with unlabeled cyanobacteria, and unlabeled river assemblages enriched with ¹⁴C-labeled cyanobacteria. Grazing rates were estimated for the rotifers Polyarthra remata, Hexarthra mira, Asplanchna brightwelli, Brachionus angularis, Epiphanes sp., Trichocerca similis, and the cyclopoid copepod Cyclops vernalis. Neither rotifers nor the copepod grazed heavily on Microcystis. Rotifer grazing rates on labeled cyanobacteria ranged from 4 to 1,650 nl· [individual · h]^?1 while copepod rates ranged from undetectable to 135 μl · [copepod · h]^?1. Grazing rates on labeled river phytoplankton assemblages were 4–100 times higher than noted for zooplankton feeding on cyanobacteria. The addition of the colonial alga to labeled river phytoplankton assemblages resulted in mixed zooplankton responses, that is, lower and higher grazing rates than observed on river assemblages with no added cyanobacteria. Total zooplankton demand for cyanobacteria and river phytoplankton assemblages was estimated for the study period July–August 1987. Rotifer plus C. vernalis herbivory would have removed 1–5% and 49%, respectively, of the standing stock of the two autotroph pools each day. Literature-derived clearance rates for Bosmina indicate, however, that herbivory by this cladoceran could increase demand to 24% and 60%, respectively, in bloom and nonbloom assemblages. These data suggest that the majority of cyanobacterial production remains ungrazed and may be transported to the lower estuary for salinity-induced aggregation and sedimentation.     

Spectral Irradiance, Phytoplankton Community Composition and Primary Productivity in a Salt Marsh Estuary, North Inlet, South Carolina, USA

We investigated spatial and temporal changes in spectral irradiance, phytoplankton community composition, and primary productivity in North Inlet Estuary, South Carolina, USA. High concentrations of colored dissolved organic matter (CDOM) were responsible for up to 84 % of the attenuation of photosynthetically available radiation (PAR). Green-yellow wavelengths were the predominant colors of light available at the two sampling sites: Clam Bank Creek and Oyster Landing. Vertical attenuation coefficients of PAR were 0.7–2.1 m^?1 with corresponding euphotic zone depths of 1.5–6.7 m. Phytoplankton biomass (as chlorophyll a [chl a]) varied seasonally with a summer maximum of 16 μg chl a l^?1 and a winter minimum of 1.4 μg chl a l^?1. The phytoplankton community consisted mainly of diatoms, prasinophytes, cryptophytes and haptophytes, with diatoms and prasinophytes accounting for up to 67 % of total chl a. Changes in phytoplankton community composition showed strongest correlations with temperature. Light-saturated chl a-specific rates of photosynthesis and daily primary productivity varied with season and ranged from 1.6 to 14 mg C (mg chl a) ^?1?h^?1 (32–803 mg C m^?3?day^?1). Calculated daily rates added up to an annual carbon fixation rate of 84 g C m^?3?year^?1. Overall, changes in phytoplankton community composition and primary productivity in North Inlet showed a strong dependence on temperature, with PAR and spectral irradiance playing a relatively minor role due to short residence times, strong tidal forcing and vertical mixing.     

Effects of zooplankton grazing on phytoplankton size-structure and biomass in the lower Hudson River estuary

The impact of mesozooplankton (>210 μm, mostly adult copepods and late-stage copepodites) and micrometazoa (64–210 μm, mostly copepod nauplii) on phytoplankton size structure and biomass in the lower Hudson River estuary was investigated using various¹⁴C-labeled algal species as tracers of grazing on natural phytoplankton. During spring and summer, zooplankton grazing pressure, defined as %=mg C ingested m^?2 h^?1/mg C produced m^?2 h^?1 (depth-integrated rates)×100, on total phytoplankton ranged between 0.04% and 1.9% for mesozooplankton and 0.1% and 6.6% for micrometazoa. The greatest grazing impact was measured in fall when 20.2% and 44.6%, respectively, of the total depth-integrated primary production from surface water phytoplankton was grazed. Mesozooplankton exhibited some size-selective grazing on phytoplankton, preferentially grazing the diatomThalassiosira pseudonana over the larger diatomDitylum brightwelli, but this was not found for micrometazoa. Neither zooplankton group grazed on the dinoflagellateAmphidinium sp. We conclude that metazoan zooplankton have a minimal role in controlling total phytoplankton biomass in the lower Hudson River estuary. Differences in the growth coefficients of various phytoplankton size-fractions—not grazing selectivity—may be the predominant factor explaining community size-structure.     

The Effects of Plant Invasion and Ecosystem Restoration on Energy Flow through Salt Marsh Food Webs

We measured the effects of a plant invasion (Phragmites australis) on resident fish (Fundulus heteroclitus) in New England salt marshes by assessing diet quality at the food web base and by quantifying the importance of primary producers to secondary production using a recently developed Bayesian mixing model (Stable Isotope Analysis in R, “SIAR”). Spartina alterniflora, the dominant native plant, exhibited significantly greater leaf toughness and higher C/N ratios relative to P. australis. Benthic microalgae and phytoplankton (as suspended particulate matter) exhibited the lowest C/N indicating higher diet quality. We conducted a sensitivity analysis in SIAR by modeling F. heteroclitus at three separate trophic levels (1.5, 2.0, and 2.5) using species-specific discrimination factors to determine basal resource contributions. Overall, the best-fitting models include those that assume F. heteroclitus resides approximately 2.0 trophic levels above primary producers. Using discrimination factors from a range of data sources reported in the literature, our analyses revealed that consumers rely less on benthic microalgae and phytoplankton in restricted marshes (7–23 % and 11–44 %, respectively) relative to reference marshes (5–34 % and 23–48 %, respectively), resulting in a shift in diet toward invasive plant consumption (0–27 %). This is likely due to increased P. australis cover and marsh surface shading leading to decreased microalgal biomass, combined with reduced flooding of the marsh surface that favors terrestrial invertebrate assemblages. Restoration decreased the quantity of P. australis in the food web (0–15 %) and increased the importance of microalgae (1–30 %), phytoplankton (19–48 %), and native plants (23–63 %), indicating a shift in ecological recovery toward reference conditions.     

Phytoplankton Growth Balanced by Clam and Zooplankton Grazing and Net Transport into the Low-Salinity Zone of the San Francisco Estuary

We estimated the influence of planktonic and benthic grazing on phytoplankton in the strongly tidal, river-dominated northern San Francisco Estuary using data from an intensive study of the low salinity foodweb in 2006–2008 supplemented with long-term monitoring data. A drop in chlorophyll concentration in 1987 had previously been linked to grazing by the introduced clam Potamocorbula amurensis, but numerous changes in the estuary may be linked to the continued low chlorophyll. We asked whether phytoplankton continued to be suppressed by grazing and what proportion of the grazing was by benthic bivalves. A mass balance of phytoplankton biomass included estimates of primary production and grazing by microzooplankton, mesozooplankton, and clams. Grazing persistently exceeded net phytoplankton growth especially for larger cells, and grazing by microzooplankton often exceeded that by clams. A subsidy of phytoplankton from other regions roughly balanced the excess of grazing over growth. Thus, the influence of bivalve grazing on phytoplankton biomass can be understood only in the context of limits on phytoplankton growth, total grazing, and transport.