Sources of sediment to the Great Barrier Reef World Heritage Area

To reduce sediment exports discharging to the Great Barrier Reef (GBR), it is essential to identify the sources of exported sediment. We used modelling of spatial sediment budgets (the SedNet model) to identify sources and deposition of sediment as it is transported through river networks. Catchments with high levels of land clearing, cattle grazing and cropping show the largest increases in sediment export compared with natural conditions. Hillslope erosion supplies 63% of sediment to the rivers. Gully erosion and riverbank erosion are lower sources of sediment at the GBR catchment scale, but they are important in some catchments. Overall, 70% of sediment exported from rivers comes from just 20% of the total catchment area, showing that much of the problem can be addressed in a relatively small area. This is a much more manageable problem than trying to reduce erosion across the entire GBR catchment. Areas of high contribution are all relatively close to the coast because of the high erosion and high sediment delivery potential.     

Natural and Enhanced Concentrations of Trace Metals in Sediments of Cleveland Bay, Great Barrier Reef Lagoon, Australia

Natural variation in concentrations of Cd, Co, Cu, Ni, Pb, and Zn in sediments of Cleveland Bay can be modelled by linear regression by using the concentration of Al recovered by strong acid digestion as an independent variable. Samples that exceed the upper 95% prediction interval of regression models are classified as enhanced. Enhancement of trace metals occurs in the intertidal zone and near-shore sediments of western Cleveland Bay, in sites that are characterized by high accumulation rates of fine grained terrigenous sediment. There is a strong positive relationship between increasing enhancement of Cu and Pb and the recovery of these metals by weak HCl digestion, which suggests that for these metals the modelled enhancement is environmentally meaningful. In contrast, at least 60%, and generally greater than 80% of Cd is recovered by weak HCl digestion irrespective of modelled enhancement, and suggests that the statistically modelled enhancement of Cd may be more meaningful than weak HCl soluble concentrations.     

Polycyclic aromatic hydrocarbons in sediments of the Great Barrier Reef region,Australia

At present the concentrations of polycyclic aromatic hydrocarbons in sediments from the Great Barrier Reef are remarkably low. The baseline levels range from <0.01 μg kg^?1 dry wt. for benzo(k)fluoranthene and benzo(a)pyrene to <0.82 μg kg^?1 for chrysene. Measurable levels of polycyclic aromatic hydrocarbons have only been found in small areas close to sites frequently visited by power boats. Sediments from Townsville and Gladstone Harbours on the coast adjacent to the reef are polluted with polycyclic aromatic hydrocarbons to a similar degree to that reported for coastal sediments in similar locations in other parts of the world.     

Submarine groundwater discharge into the near-shore zone of the Great Barrier Reef, Australia

Along the tropical coastline of the Great Barrier Reef (GBR) region, little is known to date about submarine groundwater discharge (SGD) into the near-shore ocean. In an oceanographic sense, SGD consists of freshwater flow from land as well as seawater circulated through sediments. Recent radiochemical and geophysical studies, using the tracer (222)Rn and apparent ground conductivity respectively, provide evidence for SGD to occur in a variety of hydrogeological settings. In this paper, a non-quantitative overview of different settings of SGD in the region is presented: (1) recirculation of seawater through animal burrows in mangrove forests, (2) freshwater SGD from unconfined aquifers as a narrow coastal fringe of freshwater along Wet Tropics beaches, (3) SGD from coastal dune systems in form of localised freshwater springs in the intertidal zone, (4) inner-shelf SGD from confined submarine aquifer systems comprised of riverine paleochannels incised into the shelf.     

Assessing the potential underestimation of sediment and nutrient loads to the Great Barrier Reef lagoon during floods

Much of the sediment and nutrient load to the Great Barrier Reef (GBR) lagoon happens during over bank floods, when discharge can be significantly underestimated by standard river gauges. This paper assesses the potential need for a flood load correction for 28 coastal rivers that discharge into the GBR lagoon. For each river, daily discharge was divided into flows above and below a 'flood' threshold to calculate the mean annual percentage flow above this threshold. Most GBR rivers potentially need a flood load correction as over 15% of their mean annual flow occurs above the minor flood level; only seven rivers need little/no correction as their flood flows were less than 5% of the mean annual flow. Improved assessment of the true load of materials to the GBR lagoon would be an important contribution to the monitoring and reporting of progress towards Reef Plan and associated marine load targets.     

Mapping the pollutants in surface riverine flood plume waters in the Great Barrier Reef, Australia

The extent of flood plume water over a 10 year period was mapped using quasi-true colour imagery and used to calculate long-term frequency of occurrence of the plumes. The proportional contribution of riverine loads of dissolved inorganic nitrogen, total suspended sediments and Photosystem-II herbicides from each catchment was used to scale the surface exposure maps for each pollutant. A classification procedure was also applied to satellite imagery (only Wet Tropics region) during 11 flood events (2000-2010) through processing of level-2 ocean colour products to discriminate the changing characteristics across three water types: "primary plume water", characterised by high TSS values; "secondary plume water", characterised by high phytoplankton production as measured by elevated chlorophyll-a (chl-a), and "tertiary plume water", characterised by elevated coloured dissolved and detrital matter (CDOM+D). This classification is a first step to characterise flood plumes.     

Monitoring pesticides in the Great Barrier Reef

Pesticide runoff from agriculture poses a threat to water quality in the world heritage listed Great Barrier Reef (GBR) and sensitive monitoring tools are needed to detect these pollutants. This study investigated the utility of passive samplers in this role through deployment during a wet and dry season at river mouths, two near-shore regions and an offshore region. The nearshore marine environment was shown to be contaminated with pesticides in both the dry and wet seasons (average water concentrations of 1.3-3.8 ng L⁻¹ and 2.2-6.4 ng L⁻¹, respectively), while no pesticides were detected further offshore. Continuous monitoring of two rivers over 13 months showed waters flowing to the GBR were contaminated with herbicides (diuron, atrazine, hexazinone) year round, with highest average concentrations present during summer (350 ng L⁻¹). The use of passive samplers has enabled identification of insecticides in GBR waters which have not been reported in the literature previously.     

Statistical power of detecting trends in total suspended sediment loads to the Great Barrier Reef

The export of pollutant loads from coastal catchments is of primary interest to natural resource management. For example, Reef Plan, a joint initiative by the Australian Government and the Queensland Government, has indicated that a 20% reduction in sediment is required by 2020. There is an obvious need to consider our ability to detect any trend if we are to set realistic targets or to reliably identify changes to catchment loads. We investigate the number of years of monitoring aquatic pollutant loads necessary to detect trends. Instead of modelling the trend in the annual loads directly, given their strong relationship to flow, we consider trends through the reduction in concentration for a given flow. Our simulations show very low power (<40%) of detecting changes of 20% over time periods of several decades, indicating that the chances of detecting trends of reasonable magnitudes over these time frames are very small.     

A multi-criteria approach to Great Barrier Reef catchment (Queensland, Australia) diffuse-source pollution problem

This paper presents a multi-criteria based tool for assessing the relative impact of diffuse-source pollution to the Great Barrier Reef (GBR) from the river basins draining into the GBR lagoon. The assessment integrates biophysical and ecological data of water quality and pollutant concentrations with socio-economic information pertaining to non-point source pollution and (potential) pollutant impact. The tool generates scores for each river basin against four criteria, thus profiling the basins and enabling prioritization of management alternatives between and within basins. The results support policy development for pollution control through community participation, scientific data integration and expert knowledge contributed by people from across the catchment. The results specifically provided support for the Reef Water Quality Protection Plan, released in October 2003. The aim of the plan is to provide a framework for reducing discharge of sediment, nutrient and other diffuse-source loads and (potential) impact of that discharge and for prioritising management actions both between and within river basins.     

Tidal currents in the central Great Barrier Reef

Observations at 8 sites in the outer central Great Barrier Reef show M₂, S₂, K₁, and O₁ tidal currents flow directly off-shelf (northeast), when the corresponding tide at Townsville is at zero height and falling, with typical amplitudes of 12, 6, 3, and 2 cm s^?1. On the slope (at 300 m depth), the vertically averaged long-shelf component was small. On the shelf, the eccentricity of the tidal ellipses decreases shoreward and the tidal ellipses rotate anticlockwise. The major axes of the tidal ellipses tilt left of cross-shelf, especially for the diurnal constituents. There is satisfactory agreement between the observed and modelled cross-shelf currents. The long-shelf velocity is sensitive to the long-shelf changes in amplitude and phase of the tide heights and high quality tidal data for open boundary conditions will be required if numerical models are to model these currents satisfactorily.     

Estimates of sediment and nutrient loads in 10 major catchments draining to the Great Barrier Reef during 2006-2009

The Great Barrier Reef (GBR) catchment area has been monitored simultaneously for sediment and nutrient exports from 10 priority catchments discharging into the GBR lagoon between 2006 and 2009. This allows GBR catchment-wide exports to be estimated and spatially compared within a discrete time-frame. Elevated levels of sediment and nutrient exports were recorded in all monitored catchments as compared to pre-European estimates, but vary around previous estimates of mean annual loads. During the period of monitoring, the Burdekin and Fitzroy catchments contributed the highest sediment and nutrient exports, however when loads were normalised for area, these catchments produced the lowest unit yields. In contrast, the highest yields were produced in the wetter and proportionately more intensively cultivated Johnstone, O'Connell, and Pioneer catchments particularly for dissolved nitrogens. This assessment offers the necessary scientific foundation for future monitoring, assessment, and management of sediment and nutrient loads entering the GBR.     

Comparing bleaching and mortality responses of hard corals between southern Kenya and the Great Barrier Reef, Australia

We compared the bleaching and mortality response (BMI) of 19 common scleractinian corals to an anomalous warm-water event in 1998 to determine the degree of variation between depths, sites, and regions. Mombasa corals experienced a greater temperature anomaly than those on the Great Barrier Reef (GBR) sites and this was reflected in the greater BMI response of most taxa. Comparing coral taxa in different sites at the same depth produced high correlation coefficients in the bleaching response in Kenya at 2 m (r=0.86) and GBR at 6 m depth sites (r=0.80) but less in the GBR for shallow 2 m sites (r=0.49). The pattern of taxa susceptibility was remarkably consistent between the regions. Coral taxa explained 52% of the variation in the response of colonies to bleaching between these two regions (Kenya BMI=0.90 GBR BMI+26; F(1,19) - 18.3; p < 0.001; r2 = 0.52). Stylophora and Pocillopora were consistently susceptible while Cyphastrea, Goniopora Galaxea and Pavona were resistant in both regions. Three taxa behaved differently between the two regions; Acropora, and branching Porites were both moderately affected on the GBR but were highly affected in Kenya while the opposite was true for Pavona. These results suggest that a colonies response to bleaching is phylogenetically constrained, emphasizing the importance of features of the host's physiology or morphology in determining the response to thermal stress.     

An assessment of an environmental gradient using coral geochemical records, Whitsunday Islands, Great Barrier Reef, Australia

Coral cores were collected along an environmental and water quality gradient through the Whitsunday Island group, Great Barrier Reef (Australia), for trace element and stable isotope analysis. The primary aim of the study was to examine if this gradient could be detected in coral records and, if so, whether the gradient has changed over time with changing land use in the adjacent river catchments. Y/Ca was the trace element ratio which varied spatially across the gradient, with concentrations progressively decreasing away from the river mouths. The Ba/Ca and Y/Ca ratios were the only indicators of change in the gradient through time, increasing shortly after European settlement. The Mn/Ca ratio responded to local disturbance related to the construction of tourism infrastructure. Nitrogen isotope ratios showed no apparent trend over time. This study highlights the importance of site selection when using coral records to record regional environmental signals.     

Long-term sea-level variations in the central Great Barrier Reef

Low frequency sea-level variations and associated geostrophic currents in the central Great Barrier Reef (GBR) region near Townsville are studied using optimally-lagged multivariate regression. The analyses show that pressure-adjusted coastal sea levels and mid-shelf geostrophic currents are influenced predominantly by local along-shelf wind stress at the weather time-scale, and by climatic variables, such as atmospheric pressure and temperature, at seasonal and inter-annual time-scales. These forcing variables can specify sea levels over annual and inter-annual time-scales with a forecasting skill of 0.53 and 0.22, respectively (where 1.0 is perfect skill). Associated along-shelf geostrophic currents can be forecast with a skill of 0.57 over an annual time scale. If, instead, absolute coastal sea levels or offshore sea-level differences are used to specify the along-shelf geostrophic current, the forecasting skill is 0.75. A characteristic El Niño/Southern Oscillation (ENSO) response is detected for time periods up to 25 years in monthly sea-level both at Townsville and at western Pacific island sea-level stations. This spatially coherent response varies in intensity and phase within the Coral Sea. Sea-level differences show a pattern which characterizes known features of the large-scale circulation of the Coral Sea. These very low frequency sea-level variations in the Coral Sea must be taken into account to obtain accurate predictions of along-shelf geostrophic current variations on seasonal and inter-annual time scales. Regression analysis and a diagnostic river plume model show that the influence of the major rivers can produce sea-level changes due to buoyancy of order 5 cm. The corresponding errors in geostrophic velocities estimated using pressure-adjusted Townsville sea-level data alone are of order 5 cm s⁻¹ rms.     

Trace metals in algae from the Great Barrier Reef

Zinc, copper, cadmium, nickel, lead and mercury concentrations were examined in 48 species of algae from the Great Barrier Reef. In general the data showed considerable inter- and intra-specific variation with mean levels for each metal ranging from 0.27 to 38.6; 0.74 to 11.2; 0.08 to 2.2; 0.41 to 46.1; <0.45 to 6.7, and 0.005 to 0.320 μg g⁻¹ dry weight, respectively. Not-withstanding this, levels of all metals were substantially lower than reported values for algae from metal contaminated environments. The green alga, Chlorodesmis fastigiata, was the only species examined which was abundant at all study sites and, as a consequence, was considered to be the most suitable candidate for continued surveillance studies in the area.     

Trace metals in corals from the Great Barrier Reef

Various octocorallian and scleractinian corals from within the Great Barrier Reef Province were analysed for zinc, copper, cadmium, nickel and lead by atomic absorption spectroscopy. Of the two coral groups, the octocorals accumulated significantly greater amounts of all detectable metals. The soft coral, Sarcophyton sp., revealed distinct inter-locational differences for zinc, copper and cadmium. The potential of this genus for monitoring trace metal pollution in tropical reef waters is briefly discussed.     

Water quality monitoring: a combined approach to investigate gradients of change in the Great Barrier Reef, Australia

For the managers of a region as large as the Great Barrier Reef, it is a challenge to develop a cost effective monitoring program, with appropriate temporal and spatial resolution to detect changes in water quality. The current study compares water quality data (phytoplankton abundance and water clarity) from remote sensing with field sampling (continuous underway profiles of water quality and fixed site sampling) at different spatial scales in the Great Barrier Reef north of Mackay (20 degrees S). Five transects (20-30 km long) were conducted from clean oceanic water to the turbid waters adjacent to the mainland. The different data sources demonstrated high correlations when compared on a similar spatial scale (18 fixed sites). However, each data source also contributed unique information that could not be obtained by the other techniques. A combination of remote sensing, underway sampling and fixed stations will deliver the best spatial and temporal monitoring of water quality in the Great Barrier Reef.