Species composition and seasonal dynamics of the population density and biomass of the genus <Emphasis Type="Italic">Pyramimonas</Emphasis> (Prasinophyceae) from the Russian waters of East/Japan Sea

The species composition and seasonal dynamics of the population density and biomass of the prasinophycean algae of the genus Pyramimonas were investigated in the Russian waters of the East/Japan Sea. According to literature data and the results of our observations, eight species of the prasinophycean algae were identified, and some of them were new for the Russian waters of the East/Japan Sea as follows: P. aff. amylifera Ñonrad, P. aff. cordata McFadden, Hill et Wetherbee, and P. nansenii Braarud. An analysis of their seasonal dynamics showed that the most conspicuous winter peak of the population density of Pyramimonas species in the Amurskii Bay was clearly distinguishable in February. In winter and early spring, the prasinophycean algae made a considerable contribution of 28 to 60% into the total population density on the background of a relatively low biomass, 1.1–14.4% of the total phytoplankton biomass in the Amurskii Bay. In the Golden Horn Bay, the summer peak of the population density of Pyramimonas species was most intensive in June. In summer, during the period of mass development of the algae of the genus Pyramimonas in the Golden Horn Bay, the prasinophycean algae contributed up to 71% of the total population density and up to 84% of the total microalgal biomass. An increase was noted in the density and biomass of the Pyramimonas species in the polluted waters near the sewage water outlets in the Amurskii and Golden Horn bays.     

Molecular phylogeny of the genus <Emphasis Type="Italic">Chondracanthus</Emphasis> (Rhodophyta), focusing on the resurrection of <Emphasis Type="Italic">C. okamurae</Emphasis> and the description of <Emphasis Type="Italic">C. cincinnus</Emphasis> sp. nov.

Determining the taxonomic status of the red algal genus Chondracanthus based on morphological characters is challenging due to the similarity and high degree of plasticity of the thallus. Since the taxonomic history of several Chondracanthus species remains unclear, we analyzed the plastid rbcL and mitochondrial COI genes of the specimens from Korea and Japan, in combination with morphological observations, to examine their phylogenetic relationships. Our results confirmed the distinction of C. okamurae, which is separated from C. intermedius, and identified a novel species, C. cincinnus sp. nov. Three species (C. okamurae, C. intermedius and C. cincinnus) formed a monophyletic clade with C. tenellus. C. okamurae is distinguished by linear, narrow, cylindrical to compressed, slightly recurved axes, and a high-intertidal to subtidal distribution. It was collected from Korea and Japan, while C. intermedius was identified from Japan only. A new species, Chondracanthus cincinnus sp. nov., is characterized by linear, compressed, strongly recurved axes, and a low-intertidal to subtidal distiribution. Based on the molecular phylogeny using rbcL and COI data, we herein resurrect C. okamurae as a distinct species and identify C. cincinnus as a new species.     

Feeding of the Dominant Herbivorous Plankton Species in the Black Sea and Their Role in Coccolithophorid Consumption

The feeding of abundant herbivore plankton species has been investigated during different stages of coccolithophorid development in the northeastern Black Sea, namely, at the initial stage of development (March 2009) and at the massive bloom stage (June 2011 and May 2013). The role of coccolithophorids as a food source for Black Sea copepods Calanus euxinus, Acartia clausi, and Pseudocalanus elongatus; the heterotrophic dinoflagellate Noctiluca scintillans; and the larvacean Oikopleura dioica has been characterized for the first time. The contribution of coccolithophorids to copepod ration was low (0.2 to 13% of total carbon intake) during all study periods. The content of these organisms in the diet of N. scintillans ranged from 17 to 100%. The coccolithophorid bloom apparently had a stronger positive effect on the nutrition of fine filter feeders, such as N. scintillans and O. dioica, than on copepod nutrition. Daily coccolithophorid consumption by zooplankton ranged from 0.7 to 39.4% of the biomass in different study periods. The grazing of N. scintillans and O. dioica populations made the greatest contribution to coccolithophorid consumption (up to 26 and 23% of the coccolithophorid biomass, respectively).     

Morphological identification of <Emphasis Type="Italic">Alexandrium</Emphasis> species (Dinophyceae) from Jinhae-Masan Bay,Korea

Outbreaks of paralytic shellfish poisoning (PSP) and dense blooms caused by Alexandrium species in Jinhae-Masan Bay, Korea have been nearly annual events for many years. However, excluding some Alexandrium species responsible for PSP, there are no critical reports on the morphology of Alexandrium species in this bay. To identify the Alexandrium species based on detailed morphological features, vegetative cells collected water samples and established by the incubation of resting cysts isolated from sediment trap samples were analyzed. Four species of Alexandrium were identified: Alexandrium affine, A. fundyense, A. catenella, and A. insuetum. Morphological features of these species were basically consistent with those outlined in previous studies. However, the ventral pore and the connecting pore on the sulcal plate, which have been accepted as diagnostic characteristics for the identification of A. fundyense and A. catenella, need to be reevaluated, indicating that useful morphological features for identifying these two species should be recommended to avoid confusion in the classification of species in genus Alexandrium.     

Species Composition and Distribution of Zooplankton from Northeastern Sakhalin Shelf (Sea of Okhotsk)

The species composition, density, biomass, and distribution of zooplankton of the northeastern Sakhalin shelf, Sea of Okhotsk (Chaivo, Pil’tunskii, and Morskoi regions) were studied in October 2014. Zooplankton was represented by 15 taxonomic groups, which were dominated by Copepoda (13 species). The average density and biomass was highest in the Chaivo region (14112 ± 4322 ind./m³, 395 ± 107 mg/m³) and in the Pil’tunskii region (16692 ± 10707 ind./m³, 346 ± 233 mg/m³); the abundance of detected taxonomic groups was minimal (8–12). The average density and biomass of zooplankton was up to 4304 ± 2441 ind./m³, 133 ± 77 mg/m³ in the Morskoi region and increased with depth; the abundance of taxa was maximum (15). Four species of copepods made up the majority of the density and biomass of zooplankton: Acartia hudsonica, Eurytemora herdmani, Pseudocalanus newmani, and Oithona similis. In the Chaivo region, species of the genera Acartia, Eurytemora, and Oithona dominated and subdominated; in Pil’tunskii region, species of the genera Acartia and Oithona dominated and subdominated; and in the Morskoi region, species of the genera Oithona, Pseudocalanus, and Acartia dominated and subdominated.     

Effect of Mercury Chloride on the Chlorophyl <Emphasis Type="Italic">a</Emphasis> and Pheophytin Content in Marine Microalgae: Measuring the Flow of Autotrophic Phytoplankton Using Sediment Traps Data

The present work aimed to study the influence of mercuric chloride (HgCl₂) on pigment content (chlorophyll a and pheophytin) in sediment traps on the basis of experimental data. The marine microalgal cultures of Conticribra weissflogii (Mediophyceae), Tetraselmis viridis (Chlorodendrophyceae), Amphidinium carterae (Dinophyceae), Nannochloropsis sp. (Eustigmatophyceae) were used. The obtained results revealed that the influence of mercury on pigment content as well as on photosynthetic activity was different in different species. The considerable decrease in phytopigments content was observed in Amphidinium carterae and Conticribra weissflogii, while the proportion of pheophytin increased. The pigment content of Tetraselmis viridis was not different from the control line, while for Nannochloropsis sp. the increase in pigment concentration was noticed. The complete immediate inhibition of photosynthetic activity was observed in Conticribra weissflogii, Tetraselmis viridis, Amphidinium carterae, while Nannochloropsis sp. responded only after 24 h of exposition. The pigment degradation rate was almost the same for diatoms and dinoflagellates. The equation for estimating the phytopigments content in sediment traps, that takes into consideration the exposition time, is proposed.     

东印度洋5种缘毛类纤毛虫(钟虫属和聚缩虫)水平分布初次报道

腹壁纤毛虫是一种附着在浮游动物上的原生生物,尤其是附着在桡足类和甲壳类上的。而缘毛虫是可以以自由或寄生的形式在世界各沿海地区和港湾处被发现。本研究首次对东印度洋表层至200 m深海域的缘毛类纤毛虫以及其水平分布展开了研究。根据纤毛虫的形态、纤毛结构和茎的形态等的特征,在2014年4月10日至5月13日东印度洋航次的浮游生物拖网样品中鉴定出了五种富腹纤毛虫,海洋钟形虫Vorticella oceanica、交替聚缩虫Zoothamnium alternans、阿拉聚缩虫Zoothamnium alrasheidi、远洋聚缩虫Zoothamnium pelagicum和海洋聚缩虫Zoothamnium marinum。并通过光显微镜和扫描显微镜拍摄的照片,说明了其形态、尺寸和特征。研究结果表明,海洋钟形虫和远洋聚缩虫的分布与硅藻（如,密聚角毛藻Chaetoceros coarctatus）和桡足类（如,短角长腹剑水蚤Oithona brevicornis）等寄主有关,也包括甲藻（如,三角角藻Ceraitum tripose）周围的一些个体。这些附着纤毛虫的分布在东印度洋海域东南区以海洋钟形虫、远洋聚缩虫和海洋聚缩虫为主,而在孟加拉湾北部则有大量的阿拉聚缩虫。这种分布的变化可能是与寄主的分布有关,如桡足类（短角长腹剑水蚤）和硅藻（密聚角毛藻）的分布影响。     

Effects of temperature on growth,photophysiology, Rubisco gene expression in <Emphasis Type="Italic">Prorocentrum donghaiense</Emphasis> and <Emphasis Type="Italic">Karenia mikimotoi</Emphasis>

To explore the effects of temperature changes on dinoflagellate bloom succession in the coastal waters of the East China Sea, changes in the growth, photophysiology, and Rubisco gene expression of Prorocentrum donghaiense and Karenia mikimotoi, two harmful algal species, were investigated at different temperatures (16 to 28°C). The maximal specific growth rate and the maximal mRNA expression of Rubisco gene in P. donghaiense and K. mikimotoi occurred at 20 and 24°C, respectively. The photosynthetic activity of P. donghaiense was generally stable, but K. mikimotoi photosynthesis increased when temperatures rose from 16 to 28°C. The effective photochemical efficiency (F _q ^′ /F _m ^′ ) and the maximal relative electron transfer rate (rETR_max) of K. mikimotoi increased significantly with increasing temperature, and the lowest and highest values occurred at 16 and 28°C, respectively. It seems that P. donghaiense has higher photosynthetic capacity than K. mikimotoi due to its higher F _q ^′ /F _m ^′ , rETR_max, and photosynthetic efficiency (α). However, K. mikimotoi has a higher growth rate than P. donghaiense. These results suggest that the photosynthetic activity and genetic responses of dinoflagellates are species-dependent. It is likely that temperature changes affect species composition during blooms, leading to the observed patterns of bloom succession.     

The trophic position of the alien crab <Emphasis Type="Italic">Rhithropanopeus harrisii</Emphasis> (crustacea decapoda panopeidae) in the Taman Bay,Sea of Azov community

This work concerns the trophic web positioning of the alien crab Rhithropanopeus harrisii and other common marine invertebrate species and fishes in the benthic ecosystem of the shallows of Taman Bay, Sea of Azov. The base of the trophic web in this system is composed of phytoplankton, macrophytes (algae and marine grasses), and reeds that use atmospheric carbon for photosynthesis. Analysis of the isotopic composition of nitrogen and carbon has shown that although marine grasses are dominating primary producers in the shallows of the bay, primary consumers (such as Cerastoderma glaucum, Porifera gen. sp., Gammarus aequicauda, Deshayesorchestia deshayesii and Idotea balthica) only partially use this organic source; instead, they use a combination of different sources of primary production. It has been shown that the food source of the alien crab is primarily of animal origin. In Taman Bay, R. harrisii is on the same trophic level as other carnivores/scavengers: benthic fishes Syngnathus nigrolineatus, Gobius spp. and native crab Pilumnus hirtellus and shrimp Palaemon adspersus.     

Five <Emphasis Type="Italic">Oncaea</Emphasis> species (Copepoda,Poecilostomatoida, Oncaeidae) from the Korean waters,with notes on the spatio-temporal distribution of Korean oncaeid species

Five Oncaea species were recorded on the basis of specimens collected using three type nets from the South Sea and the East Sea of Korea. These included the clevei-group of one species (O. clevei) and the venusta-group of four species (O. media, O. mediterranea, O. scottodicarloi, O. waldemari). The former has a dorsoposterior projection on the second pedigerous somite, while the latter do not bear any dorsal projection on the somite. Also, their spatio-temporal distribution are discussed in relation to temperature-salinity.     

Features of the spatial distribution of phytoplankton in Nhatrang Bay of the South China Sea during the rainy season

The species composition, phytoplankton abundance, and relative yield of the variable fluorescence (F _v /F _m ) were determined in the mesotrophic Nhatrang Bay in October–November of 2004. The species diversity (250 taxonomic units) and heterogeneity of the phytoplankton structure were high. With respect to the number of species and their abundance, diatoms prevailed. In selected parts of the bay, dinoflagellates dominated. The mean biomass in the water column under 1 m² (B _t ) varied from 2.3 to 64.4 mg C/m³ being 31.0 mg C/m³ on average. The values of B _t were the lowest at the stations nearest to the river mouth. Seaward, B _t increased. The values of B _t increased with depth at some stations and decreased at others. In the surface sea layers, the biomass was lower than that in the underlying waters. The values of F _v /F _m ranged from 0.10 to 0.64 (at a mean value of 0.49). The lowest values of F _v /F _m were observed in the area close to the seaport. Over the greater part of the bay, the values of F _v /F _m were higher than 0.47. Such values are indicative of the relatively high potential photosynthetic activity of the phytoplankton. The abundance and species diversity were higher than those in the dry season (March–April).     

Age determination and growth rate of <Emphasis Type="Italic">Mactra chinensis</Emphasis> (Bivalvia: Mactridae) by external rings and chondrophore growth bands

Age, growth and mortality of Mactra chinensis were investigated during the period from October 2012 to September 2013 in Busan, South Korea. The monthly variation of the marginal index (MI) of the shell and chondrophore showed that the ring of this species was formed once a year during July. We estimated the age of M. chinensis by reading the external rings on the shell and the growth bands of the chondrophore to compare growth parameters between the two growth characters. The age of this species ranged from 0 to 8 years (shell-based age reading) and from 0 to 10 years (chondrophore-based age reading). Based on external rings and growth bands of chondrophore for the same period, the von Bertalanffy growth functions were expressed by the equation, L _t = 101.53[1-exp {-0.15(t + 0.75)}] and L _t = 90.03[1-exp {-0.20(t + 0.50)}], respectively. The likelihood test showed that there was a significant difference in L _∞ (P < 0.001), K (P < 0.001), to (P < 0.001) estimated from non-linear regression between the two growth characters.     

Phylogenetic relationship between symbionts of tubeworm <Emphasis Type="Italic">Lamellibrachia satsuma</Emphasis> and the sediment microbial community in Kagoshima Bay

Vestimentiferan tubeworms acquire their symbionts through horizontal transmission from the surrounding environment. In the present study, we constructed a 16S rRNA gene clone library to investigate the phylogenetic relationship between diverse microbes in the sediment and symbiotic bacteria in the trophosome of the tubeworm, Lamellibrachia satsuma, from Kagoshima Bay, Japan. Two symbiotic bacterial phylotypes belonging to the classes γ- and ε-Proteobacteria were found from this tubeworm trophosome. They were very closely related to the symbionts of several other marine invertebrates. The most predominant bacteria in the sediment were ε-Proteobacteria. A broad diversity of bacteria belonged to non-proteobacterial phyla such as Planctomycetes, Acidobacteria, and Chloroflexi was observed. The presence of sulfur oxidizers (i.e., ε-Proteobacteria and γ-Proteobacteria) and sulfur reducers (i.e., δ-Proteobacteria) may play a significant role in the sulfur cycle in these habitats and provide multiple sources of nutrition to the cold-seep communities. Closely related clones of ε-Proteobacteria symbiont in the species level and of γ-Proteobacteria symbiont in the genus level were found in the surrounding sediment. The similarity of symbiont clones of L. satsuma with other symbionts and free-living bacteria suggests the possibility of opportunistic symbiosis in ε-Proteobacteria and the co-evolution of γ-Proteobacteria having occurred after symbiosis with the tubeworms.     

Reproductive biology of blood cockle <Emphasis Type="Italic">Anadara granosa</Emphasis> (Bivalvia: Arcidae) in the northern region of the Strait of Malacca

A study on the reproductive cycle of the blood cockle Anadara granosa (Bivalvia: Arcidae) was conducted at three different areas in the northern region of the Strait of Malacca. A total of 1,920 samples of adult A. granosa (38–71 mm length) were collected from June 2009 until September 2010. Qualitative techniques (gonadal microscopic fresh smear test and histology analysis) as well as quantitative techniques (analysis of condition index and gonadal index) were used to predict monthly gonadal development stages of A. granosa. The gonadal index of A. granosa from Banda Aceh (Indonesia) (r = 0.469, P > 0.05) and Pulau Pinang (Malaysia) (r = 0.123, P > 0.05) did not show any correlation to their condition index, whereas the gonadal index of A. granosa from Lhokseumawe (Indonesia) (r = 0.609, P < 0.05) showed moderate positive correlation to the condition index. During the 16 month sampling period, four reproductive cycles were observed: each from three to six months. The process of releasing gametes is termed dribble spawning, and is the same in all populations. The principle component analysis (PCA) indicated that A. granosa reproduction was affected by interaction between internal physiological factors and indigenous environmental factors. In all sampling areas, phytoplankton density played a key role in the reproductive cycle in A. granosa. Information on the reproductive biology of this species is essential for species management and to improve the sustainability practices of the fisheries industry. These findings will provide basic information on the biology of the blood cockle A. granosa for stock management in the region.     

Changes in the egg production rate of two copepod species of the genus <Emphasis Type="Italic">Pseudocalanus</Emphasis> in relation to temperature in the White Sea

This study examines changes in egg production rates of two co-occurring Pseudocalanus species, P. acuspes and P. minutus, in response to changing temperatures (0, 3, 6, 9 and 12°C) in the White Sea. The boreal P. acuspes (sample size >650 individuals) increased its reproductive rate gradually across the entire range of temperatures from 0 to 12°C. Significant differences in egg production rates and reaction to temperature were also observed between P. acuspes females incubated during the early vs. the mid-summer season. The sample size of the Arctic P. minutus was significantly smaller due to the low numbers at which this species occurred. However, the results suggest that this species increases its egg production rates from 0 to 3°C from 3.3 to 8.5% dry weight female^–1 day^–1, but at 9° its reproductive rate drops significantly and the animals demonstrate markedly reduced fitness. Our results indicate that closely related co-occurring species, and even different generations within one species, can demonstrate significantly different responses to changes in the physical environment.     

Accumulation of Chemical Elements in the Dominant Species of Copepods in the Ob Estuary and the Adjacent Shelf of the Kara Sea

Studies were carried out in the Ob River estuary and at the adjacent shelf of the Kara Sea. The concentrations of organic carbon, lipids, major elements (Na, Mg, P, S, K, and Ca), trace elements (Li, Be, B, Al, Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Ga, As, Se, Rb, Sr, Y, Mo, Ag, Cd, Sb, Cs, Ba, Hg, Tl, Pb, Bi, Th, and U), and rare-earth elements (La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu) were determined in the dominant species of mesozooplankton (Senecella siberica, Limnocalanus macrurus, and Calanus spp.). The similarities and differences are shown for the chemical compositions of the specimens. Calanus spp. are characterized by a large Li accumulation with concentrations ~350 times higher than those in S. siberica and L. macrurus. The total accumulation of chemical elements per unit volume is higher in L. macrurus than in S. siberica and Calanus spp., amounting to 6.63, 0.69, and 0.41 mg, respectively. The intensity of biological accumulation and the spatial disposition of the area of maximum accumulation of elements in the zooplankton community within the boundaries of the Ob River estuary depend on the hydrophysical conditions. Postmortem variations in the concentrations of chemical elements in dead L. macrurus are characterized by a multidirectional nature. The revealed distinctions of the chemical compositions in live and dead L. macrurus represent the features of lifetime and postmortem concentrations of elements.     

Contemporary condition of macrozoobenthos in ultrashallow zone of Taman Bay,Sea of Azov

The distribution of macrozoobenthic communities was studied in a vast ultrashallow (0–1.2 m deep) zone of northwestern Taman Bay (separated from the Kerch Strait by Chushka spit) in 2008–2009. Fifty-two species of benthic invertebrates were recorded. The species number, as well as Shannon and Pielou diversity indices, increased along Chushka spit from base to tip. The usual inhabitants of lagoons and estuaries of the Mediterranean Basin and the open Sea of Azov dominated in benthic communities: mollusks Abra segmentum and Hydrobia acuta and polychaetes Heteromastus filiformis and Hediste diversicolor (the latter only in summer). Changes in the community structure were largely determined by the seasonal dynamics of dominant species populations, which was similar to their dynamics in certainother transitional water bodies of the Mediterranean Basin. These changes indicate normal running of seasonal processes in the macrobenthic communities of Taman Bay in 2008 rather than the consequences of a catastrophic black oil spill in the Kerch Strait in November 2007.     

An assemblage of mollusks associated with the high latitude scleractinian coral <Emphasis Type="Italic">Alveopora japonica</Emphasis> (Eguchi 1968) in Jeju Island,off the south coast of Korea

Corals reefs and communities support a wide range of flora and fauna. The complete richness and abundance of faunal communities in either coral reefs or communities is not fully understood. This is especially true for high-latitude coral communities. In this work, we carried out an analysis of an Alveopora japonica associated mollusk assemblage, in Jeju Island, Korea. A. japonica is one of the major coral species present in high abundance (88–155 colonies m^-2), with a high recruitment rate (7.8 juvenile corals m^-2 yr^-1) in Jeju Island, and may serve as a habitat for other benthic organisms. In 2012, a total number of 579 A. japonica colonies with sizes ranging between 15.1-346.7 cm² in the surface area were collected from a 1m× 10m quadrat installed at a depth of 10 m at Keumneung, on the northwest coast of Jeju Island. Numerous benthic invertebrates were found to be associated with A. japonica colonies. Twenty-seven bivalves and gastropods were identified, including a boring mytilid, Lithophaga curta, and an arcid, Barbatia stearnsi. A zonalgeographical examination of the distribution ranges of these mollusks revealed a majority of warmer water species. Our observations also showed that A. japonica may be providing a habitat to grazing gastropod, Turbo cornutus, and encrusting Spondylidae and Chamidae bivalves. A. japonica forms a coral carpet with a distinct assemblage of bivalves. It is thought that the presence of these mollusks species in the coral indicates its use as a nursery for juvenile species, a ready food supply of organic detritus, and a refuge from predators.