Bioelectricity generation and remediation of sulfide contaminated tidal flat sediment

A dramatic decrease in the catch of shellfish has been observed due to the high amount of Acid Volatile Sulfide(AVS) in the tidal flats in Japan.In the current study,an evaluation of simultaneous bioelectricity generation and remediation of sulfide contaminated tidal flat sediment has been done.The sediment samples collected from Tokyo Bay and Yamaguchi Bay,Japan,have been used in the laboratory test.A 2 L cylindrical shaped Sediment Microbial Fuel Cell(SMFC) has been used to evaluate the remediation of both sediment samples in the laboratory.Three different electrode materials carbon felt,carbon fiber and bamboo charcoal were used in the experiments to compare their efficiency to reduce the AVS from the sediment and generate bioelectricity.It was observed that the AVS reduction was higher at 5 cm depths for the Tokyo Bay sediment(100%) compared to the Yamaguchi Bay sediment(60%).The larger grain size for the Tokyo Bay sediment was the probable reason for this.The maximum voltage was around 100 and80 mV for Tokyo Bay and Yamaguchi Bay,respectively.     

Numerical modeling of tidal currents, sediment transport and morphological evolution in Hangzhou Bay, China

A 2D depth-averaged numerical model is set up to simulate the macro-scale hydrodynamic characteristics, sediment transport patterns and morphological evolution in Hangzhou Bay, a large macro-tidal estuary on the eastern coast of China. By incorporating the shallow water equations, the suspended sediment transport equation and the mass-balance equation for sediment; short-term hydrodynamics, sediment transport and long-term morphological evolution for Hangzhou Bay are simulated and the underlying physical mechanisms are analyzed. The model reproduces the spatial distribution patterns of suspended sediment concentration (SSC) in Hangzhou Bay, characterized by three high SSC zones and two low SSC zones. It also correctly simulates the residual flow, the residual sediment transport and the sediment accumulation patterns in Hangzhou Bay. The model results are in agreement with previous studies based on field measurements. The residual flow and the residual sediment transport are landwards directed in the northern part of the bay and seawards directed in the southern part. Sediment accumulation takes place in most areas of the bay. Harmonic analysis revealed that the tide is flood-dominant in the northern part of the bay and ebb-dominant in the southern part of the bay. The strength of the flood-dominance increases landwards along the northern Hangzhou Bay. In turn sediment transport in Hangzhou Bay is controlled by this tidal asymmetry pattern. In addition, the direction of tidal propagation in the East China Sea, the presence of the archipelago in the southeast and the funnel-shaped geometry of the bay, play important roles for the patterns of sediment transport and sediment accumulation respectively.     

Effects of vegetation on flow conveyance and sediment transport capacity

In-stream and riparian vegetation may significantly affect flow and sediment transport in vegetated channels. A hydraulic model has been developed in this paper to compute the flow discharge in channels with rigid and flexible vegetation under emergent and submerged conditions. An empirical formula has also been presented to determine the bed-load discharge in vegetated channels. The model has been tested against experimental and field data available in the literature. The computed flow discharge and bed-load transport rate agree well with the measured data.     

The effect of a small vegetation dieback event on salt marsh sediment transport

Vegetation is a critical component of the ecogeomorphic feedbacks that allow a salt marsh to build soil and accrete vertically. Vegetation dieback can therefore have detrimental effects on marsh stability, especially under conditions of rising sea levels. Here, we report a variety of sediment transport measurements associated with an unexpected, natural dieback in a rapidly prograding marsh in the Altamaha River Estuary, Georgia. We find that vegetation mortality led to a significant loss in elevation at the dieback site as evidenced by measurements of vertical accretion, erosion, and surface topography compared to vegetated reference areas. Below-ground vegetation mortality led to reduced soil shear strength. The dieback site displayed an erosional, concave-up topographic profile, in contrast to the reference sites. At the location directly impacted by the dieback, there was a reduction in flood dominance of suspended sediment concentration. Our work illustrates how a vegetation disturbance can at least temporarily reverse the local trajectory of a prograding marsh and produce complex patterns of sediment transport. © 2018 John Wiley & Sons, Ltd.     

Net sediment transport in tidal basins: quantifying the tidal barotropic mechanisms in a unified framework

Net sediment transport in tidal basins is a subtle imbalance between large fluxes produced by the flood/ebb alternation. The imbalance arises from several mechanisms of suspended transport. Lag effects and tidal asymmetries are regarded as dominant, but defined in different frames of reference (Lagrangian and Eulerian, respectively). A quantitative ranking of their effectiveness is therefore missing. Furthermore, although wind waves are recognized as crucial for tidal flats’ morphodynamics, a systematic analysis of the interaction with tidal mechanisms has not been carried out so far. We review the tide-induced barotropic mechanisms and discuss the shortcomings of their current classification for numerical process-based models. Hence, we conceive a unified Eulerian framework accounting for wave-induced resuspension. A new methodology is proposed to decompose the sediment fluxes accordingly, which is applicable without needing (semi-) analytical approximations. The approach is tested with a one-dimensional model of the Vlie basin, Wadden Sea (The Netherlands). Results show that lag-driven transport is dominant for the finer fractions (silt and mud). In absence of waves, net sediment fluxes are landward and spatial (advective) lag effects are dominant. In presence of waves, sediment can be exported from the tidal flats and temporal (local) lag effects are dominant. Conversely, sand transport is dominated by the asymmetry of peak ebb/flood velocities. We show that the direction of lag-driven transport can be estimated by the gradient of hydrodynamic energy. In agreement with previous studies, our results support the conceptualization of tidal flats’ equilibrium as a simplified balance between tidal mechanisms and wave resuspension.     

The role of biophysical interactions within the ijzermonding tidal flat sediment dynamics

This paper focuses on the importance of biophysical interactions on short-term and long-term sediment dynamics. Therefore, various biological (macrobenthos, photopigments, colloidal EPS) and physical parameters (grain size, water content, sediment stability, bed level) were determined (bi)monthly in nine sampling plots on the IJzermonding tidal flat (Belgium, 51°08′N, 2°44′E) during three consecutive years (July 2005–June 2008). Results showed that sediment stability varied on the short timescale and was directly influenced by biota, while bed level varied mainly on the long-term due to interannual variability. The short-term dynamic relationships between mud content, water content, fucoxanthin and macrobenthos density resulted in a seasonal mud deposition and erosion cycle, and directly influenced sediment stability. Moreover, macrobenthos was proven to be the most important parameter determining sediment stability. On the long-term, a shift was observed from high fucoxanthin/chla concentration, high mud content and zero to moderate densities of Corophium volutator towards low fucoxanthin/chl a and mud content and high Corophium densities, which resulted in a transition from net accretion to net erosion. However, most measured variables proved to be poor predictors for these long-term bed level changes, indicating that external physical forces, such as waves and storminess, probably were the most important factors triggering long-term sediment dynamics. Nevertheless, biota indirectly influenced bed level changes by mediating short-term changes in sediment stability, thereby influencing the erodability of the sediment. The macrobenthos, and especially the mud shrimp Corophium, was suggested as the (indirect) driving destabilising factor for the sampling plots in the IIzermonding when considering the long-term evolution.     

Comparative study on magnetic minerals of tidal flat deposits from different sediment sources in Jiangsu coast,Eastern China

Understanding the sources of sediments deposited in tidal flats is critical for reconstructing the evolution of coastal regions impacted by large rivers. Environmental magnetism can be an effective tool to track sediment sources and analyze the sediment properties. We evaluate several magnetic parameters from the tidal flat sediments along the Jiangsu coast. The results show that the sediments of Liandao Island have the lowest values of magnetic susceptibility (χ), anhysteretic remanent magnetization (ARM) and saturation isothermal remanence magnetization (SIRM). In addition to these, the values of χ, ARM and SIRM display a generally increasing trend from the north to the south along the Jiangsu coast. The strong relations between χ, ARM and SIRM show that the changes of magnetization of the tidal flat sediments mainly reflect the changes of concentration rather than those in grain sizes of magnetic particles. The main magnetic phase is magnetite, with a small amount of hematite. The strong relationship between χ and the 2-16 μm grain-size fraction suggests that magnetite is enriched in the finer silt fraction. The sediment sources is the main factor that influences the magnetic properties of the tidal flat sediments from the Jiangsu coast. Combined with the previous studies, the results indicate that the tidal flat sediments of Liandao Island were mainly derived from the nearshore rock weathering. The Yellow River is the dominant supplier for the north of Dafeng, while the Yangtze River is the dominant supplier for the south of Rudong. The coast between Dafeng and Rudong is a transition zone influenced by both rivers. This study provides a basis against which possible future variations in sediment composition resulting from catchment changes can be assessed.     

Denitrification in Chongming east tidal flat sediment, Yangtze estuary, China

From July 2003 to July 2004, samples were collected on Chongming Island east tidal flat every two months. The research showed that the nitrous oxide (N2O) production rate was very low in the water, Chongming east tidal flat (CM) sediment was the N2O source of the water. Sediment N2O natural production rate was between -0.08 and 1.74 μmolN·m-2·h-1. N2O natural production rate was higher in the summer. The difference of the N2O natural production rate in the different tidal flats, the correlation between the N2O natural production rate and the denitrification rate, and those with the temperature and DO indicate that middle tidal flat sediment denitrification was the main process of the N2O production, while in the low tidal flat sediment, the production of the N2O came from several processes of the nitrogen cycling. Tidal flat sediment denitrification reaction was stronger in summer and winter but relatively lower in the late autumn and early spring. Seasonal change of the sediment denitrification rate was wide, from 1.12 to 33.34 μmolN·m-2·h-1. Temperature, DO and the coactions of them had the prominent effect on the tidal flat sediment denitrification.     

Simulating the role of tides and sediment characteristics on tidal flat sorting and bedding dynamics

Understanding sediment sorting and bedding dynamics has high value to unravelling the mechanisms underlying geomorphological, geological, ecological and environmental imprints of tidal wetlands and hence to predicting their future changes. Using the Nanhui tidal flat on the Changjiang (Yangtze) Delta, China, as a reference site, this study establishes a schematized morphodynamic model coupling flow, sediment dynamics and bed level change to explore the processes that govern sediment sorting and bedding phenomena. Model results indicate an overall agreement with field data in terms of tidal current velocities, suspended sediment concentrations (SSCs), deposition thicknesses and sedimentary structures. Depending on the variation of tidal current strength, sand-dominated layers (SDLs) and mud-dominated layers (MDLs) tend to form during spring and neap tides, respectively. Thinner tidal couplets are developed during daily scale flood–ebb variations. A larger tidal level variation during a spring–neap tidal cycle, associated with a stronger tidal current variation, favours the formation of SDLs and tidal couplets. A larger boundary sediment supply generally promotes the formation of tidal bedding, though the bedding detail is partially dependent on the SSC composition of different sediment types. Sediment properties, including for example grain size and settling velocity, are also found to influence sediment sorting and bedding characteristics. In particular, finer and coarser sediment respond differently to spring and neap tides. During neap tides, relatively small flow velocities favour the deposition of finer sediment, with limited coarser sediment being transported to the upper tidal flat because of the larger settling velocity. During spring tides, larger flow velocities transport more coarser sediment to the upper tidal flat, accounting for distinct lamination formation. Model results are qualitatively consistent with field observations, but the role of waves, biological processes and alongshore currents needs to be included in further studies to establish a more complete understanding.     

The effect of geometry and tidal forcing on hydrodynamics and net sediment transport in semi-enclosed tidal basins

A new depth-averaged exploratory model has been developed to investigate the hydrodynamics and the tidally averaged sediment transport in a semi-enclosed tidal basin. This model comprises the two-dimensional (2DH) dynamics in a tidal basin that consists of a channel of arbitrary length, flanked by tidal flats, in which the water motion is being driven by an asymmetric tidal forcing at the seaward side. The equations are discretized in space by means of the finite element method and solved in the frequency domain. In this study, the lateral variations of the tidal asymmetry and the tidally averaged sediment transport are analyzed, as well as their sensitivity to changes in basin geometry and external overtides. The Coriolis force is taken into account. It is found that the length of the tidal basin and, to a lesser extent, the tidal flat area and the convergence length determine the behaviour of the tidally averaged velocity and the overtides and consequently control the strength and the direction of the tidally averaged sediment transport. Furthermore, the externally prescribed overtides can have a major influence on tidal asymmetry in the basin, depending on their amplitude and phase. Finally, for sufficiently wide tidal basins, the Coriolis force generates significant lateral dynamics.     

Modelling the biogeochemistry of a tidal flat ecosystem with EcoTiM

The ecological tidal model simulates the cycling of carbon, nitrogen, phosphate, and silicate and describes the tidal, diurnal, and annual dynamics of the back barrier area of the island Spiekeroog in the German Bight. The region is characterized by strong tidal currents and extensive tidal flats. It is strongly influenced by the conditions in the southern part of the German Bight. This model study investigates the dependence of the model behavior on the boundary conditions and the forcing. The effect of short- and long-term sea level rise on nutrient and plankton dynamics is analyzed. As the model is set up as semi-Lagrangian with only a coarse approximation of the hydrodynamics, the seasonal and intratidal variability in the biogeochemical cycling can only be reproduced qualitatively. By varying the boundary conditions, the intrinsic dynamics of the back barrier area can be separated from boundary condition effects. This study shows that any agreement between model results and field data cannot be expected without correct boundary conditions. The seasonal variability is of major importance, while higher-frequency variability only plays a minor role.     

Suspended sediment transport along an idealised tidal embayment: settling lag, residual transport and the interpretation of tidal signals

We present semi-analytical solutions for suspended sediment concentration (SSC) and residual sediment transport in a simple mathematical model of a short tidal embayment. These solutions allow us to investigate in some detail the characteristic tidal and semi-tidal variation of SSC and the processes leading to residual sediment transport, including settling and scour lags, the roles of ‘local’ and ‘advective’ contributions, and the presence of internally or externally generated overtides. By interpreting the transport mechanisms in terms of the classic conceptual models of settling lag we clarify how these models may be expressed in mathematical terms. Our results suggest that settling lag is usually a more important process than scour lag, and that a local model which neglects advection may predict the direction of net sediment transport incorrectly. Finally, we discuss our results in the context of other transport processes and morphodynamic feedback.     

Currents in a small channel on a sandy tidal flat

Channels affect drainage and bed stresses on tidal flats. Here, near-bottom currents observed on a sandy tidal flat are compared with those observed 35 m away inside a shallow (≈0.3 m deep) channel. For water depths between 0.5 and 2.5 m (when both current meters are submerged), current speeds 0.13 m above the bed on the flat are about 30% greater than those observed 0.13 m above the bed in the channel, and are approximately equal to those observed 0.58 m above the channel bed (0.26 m above the flat elevation). Flow directions on the flat are similar to those in the channel. For flows directed across the channel axis, the ratio of speeds increases from about 1.3 to about 2.2 with increasing water depth. The corresponding ratio of the vertical velocity variances (a proxy for turbulence) decreases from about 1.5 to about 0.2, suggesting that the turbulence near the bed of the channel is greater than that near the bed of the flat for water depths greater than about 1.0 m. Drag coefficients estimated with the vertical velocity variance are approximately 70% larger in the channel than over the visually smoother flat, consistent with prior studies suggesting that channels may increase tidal-flat roughness. For flows directed along the channel axis (in the cross-flat direction), the ratio of speeds (1.2) is similar to the ratio predicted by a cross-flat momentum (along-channel) balance.     

Effects of spilled oil on microbial communities in a tidal flat

Effects of spilled oil on microbial communities in tidal flats were examined by use of a simulator for a tidal flat ecosystem. The simulator is composed of a wave generator, a tide control device, and a tidal flat. Sediment for the tidal flat was obtained at a natural tidal flat in Hiroshima Bay, Japan. After stabilizing the benthic organisms, fuel oil C was added to the surface of the flat at 1 lm(-2). Although the total number of micro-organisms remained at 1.5-3.5 x 10(9) cells g(-1) dry sediment irrespective of the addition of oil, bacterial communities which were analyzed based on the 16S rDNA showed clear changes after the addition of fuel oil C and after a subsequent recovery period. Bacterial colonies were randomly isolated from the oil-supplemented sediment during the experiments, and the isolates were examined for susceptibility to hydrocarbons in order to screen the oil-susceptible bacteria. The proportion of oil-susceptible bacteria in the isolates decreased with the addition of the oil. Oil-susceptible bacteria showed an inability to assimilate petroleum compounds as well as an inhibition of growth. The possibility of using oil-susceptible bacteria as an indicator of bioremediation in tidal flats was discussed.     

The influence of changes in tidal asymmetry on residual sediment transport in the Western Scheldt

This study fits into a wider research program from RWS RIKZ concerning the exchange of sediment between the coast and the tidal basins, Western Scheldt and Wadden Sea, which are the largest basins along the Dutch Coast, over different time-scales. For both basins, questions about the evolution of the import/export at the mouth recently arose. In case of the Western Scheldt, which is the subject of this study, mainly the uncertainty about the future developments after the change from import to export at the mouth was noticed in the 1990s, which necessitated a more detailed study of this area.     

Modelling wind‐blown sediment transport around single vegetation elements

Wind erosion is an important soil erosion and hence a soil degradation problem in the Sahelian zone of West Africa. Potentially, the characteristic dryland vegetation with scattered trees and shrubs can provide for soil erosion protection from wind erosion, but so far adequate quantification of vegetation impacts is lacking. The aim of this study was to develop a model of wind‐blown soil erosion and sediment transport around a single shrub‐type vegetation element. Starting with the selection of a suitable transport equation from four possible sediment transport equations, the effects of a single vegetation element on wind speed were parameterized. The modified wind speed was then applied to a sediment transport equation to model the change in sediment mass flux around a shrub. The model was tested with field data on wind speed and sediment transport measured around isolated shrubs in a farmer's field in the north of Burkina Faso. The simple empirical equation of Radok (Journal of Glaciology 19 : 123–129, 1977) performed best in modelling soil erosion and sediment transport, both for the entire event duration and for each minute within an event. Universal values for the empirical constants in the sediment transport equation could not be obtained because of the large variability in soil and roughness characteristics. The pattern of wind speed, soil erosion and sediment transport behind a shrub and on either side of it was modelled. The wind speed changed in the lee of the vegetation element depending on its porosity, height and downwind position. Wind speed was recovered to the upstream speed at a downwind distance of 7·5 times the height of the shrub. The variability in wind direction created a ‘rotating’ area of influence around the shrub. Compared to field measurements the model predicted an 8% larger reduction in sediment transport in the lee of the vegetation element, and a 22% larger increase beside the vegetation element. Copyright © 2011 John Wiley & Sons, Ltd.     

Numerical modelling of intra-wave sediment transport on sandy beaches using a non-hydrostatic,wave-resolving model

Ocean Dynamics - The mutual feedback between the swash zone and the surf zone is known to affect large-scale morphodynamic processes such as breaker bar migration on sandy beaches. To fully resolve...     

Numerical modelling of the suspended sediment transport in Torres Strait

One-dimensional vertical and three-dimensional fine-resolution numerical models of sediment transport have been developed and applied to the Torres Strait region of northern Australia. The one-dimensional model, driven by measured waves and currents, was calibrated against measured suspended sediment concentrations using a sequential data assimilation algorithm. The algorithm produced a good match between model and data, but this was achieved only by allowing some temporal variability in parameter values, suggesting that there were underlying uncertainties in the model structure and forcing data. Implications of the assimilation results to the accuracy of the numerical modelling are discussed and the need for observational programmes having an extensive spatial and temporal coverage is highlighted. The three-dimensional sediment model, driven by modelled waves and currents, simulates sediment transport over the shelf during the monsoon and trade-wind seasons covering 1997–2000. The model predicts strong seasonal variability of the sediment transport on the shelf attributed to seasonally varying hydrodynamics, and illustrates significant inter-annual variability of the sediment fluxes driven by extreme events. The developed model provides a platform for testing scientific hypothesis. With additional calibration, including uncertainty analysis, it can also be used in a management context.     

Morphological controls in sandy estuaries: the influence of tidal flats and bathymetry on sediment transport

The morphodynamics of shallow, vertically well-mixed estuaries, characterised by tidal flats and deeper channels, have been investigated. This paper examines what contributes to flood/ebb-dominant sediment transport in localised regions through a 2D model study (using the TELEMAC modelling system). The Dyfi Estuary in Wales, UK has been used as a case study and, together with idealised estuary shapes, shows that shallow water depths lead to flood dominance in the inner estuary whilst tidal flats and deep channels cause ebb dominance in the outer estuary. For medium sands and with an artificially ‘flattened’ bathymetry (i.e. no tidal flats), the net sediment transport switches from ebb-dominant to flood-dominant where the parameter a/h (local tidal amplitude ÷ local tidally averaged water depth) exceeds 1.2. Sea level rise will reduce this critical value of a/h and also reduce the ebb-directed sediment transport significantly, leading to a flood-dominated estuarine system. A similar pattern, albeit with greater transport, was simulated with tidal flats included and also with a reduced grain size. This suggests that analogous classifications for flood/ebb asymmetry of the tide in estuaries as a whole may not represent the local sediment transport in sufficient detail. Through the Dyfi simulations, the above criterion involving a/h is shown to be complicated further by augmented flow past a spit at the estuary mouth which gives rise to a self-maintaining scour hole. Simulations of one year of bed evolution in an idealised flat-bottomed estuary, including tidal flow past a spit, recreate the flood/ebb dominance on either side of the spit and the formation of a scour hole in between. The erosion rate at the centre of the hole is reduced as the hole deepens, suggesting the establishment of a self-maintaining equilibrium state.     

Bed morphological changes around a finite patch of vegetation

For the appropriate management and restoration of rivers, isolated vegetation is often a practical means for improving stream habitat and ecology. The effect of a finite vegetation patch on flow and bed morphology in an open channel was investigated using laboratory experiments. The patch containing emergent and submerged vegetation was modeled using circular cylinders and located mid‐channel along a side wall. Several configurations of the patch and submergence ratio (i.e. water depth to the height of vegetation), and two flow conditions (i.e. below and above the sediment motion threshold) were considered. For flows below the sediment motion threshold, erosion occurred primarily on the opposite side of the patch and near the leading edge of the patch. The degree of scouring depth observed in both these regions was affected by the submergence ratio and it increased with the non‐dimensional flow blockage (i.e. the product of the patch density and width). In contrast, for flows above the sediment motion threshold, sediment accumulated within and around the patch due to a reduction in bed shear stress, which was strongly influenced by the flow blockage and the obstruction ratio (i.e. the ratio of patch width to channel width). The eroded area observed within the patch was consistent with the interior adjustment region where the deceleration and diversion of flow occurred through the patch. As the flow blockage increased or as the obstruction ratio decreased, the deposition rate within and behind the patch decreased. Furthermore, the deposition rate increased with an increase in the ratio of flow rate through the patch to total flow rate regardless of the submergence ratio. Copyright © 2014 John Wiley & Sons, Ltd.