The impacts of the 2004 hurricanes on hydrology, water quality, and seagrass in the Central Indian River Lagoon, Florida

Between August 14 and September 26, 2004, four tropical weather systems (Charley, Frances, Ivan, and Jeanne) affected the central Indian River Lagoon (IRL). The central IRL received a prodigious amount of rainfall for the 2 mo, between 72 and 83 cm, which is a once-in-50-yr rainfall event. High stream discharges were generated that, combined with wind-suspended sediments, significantly reduced salinities and water transparency. In September, salinities among central IRL segments dropped from 30 psu or more to ≤15 psu, color increased from a low of 10 pcu to ≥100 pcu, and turbidity increased from ≤3 NTU up to 14 NTU. Evidence of the hurricanes' physical effects on seagrasses (burial, no scour) was limited to just one of the more than 25 sites inspected. Within 2 to 3 mo following the hurricane period, most parameters related to water transparency returned to or showed improvement over their prehurricane (February–July 2004) levels. Unseasonably low salinities (<20 psu) and moderately high color (>20 pcu) were observed through spring 2005, largely attributable to a relatively long residence time and a wetter-than-average spring season in 2005. By the end of the study period (July 2006), the central IRL generally showed a continuation of two opposite seagrass trends—an increase in depthlimit coverage but a decline in coverage density—that began before 2004. Also, within a limited reach of the central IRL, there was a temporary shift in species composition in summer 2005 (Ruppia maritima increased asHalodule wrightü decreased). It is likely that the persistently low salinities (not color) in 2004–2005 affected the species composition and coverage density. This study reveals that seagrasses are resilient to the acute effects of hurricanes and underscores the need to reduce chronic, an thropogenic effects on seagrasses.     

The demise and recovery of seagrass in the northern Indian River Lagoon,Florida

Seagrass both disappeared and recovered within 4 yr in one region of northern Indian River Lagoon (IRL). For the specific area referred to as Turnbull Bay, a relatively pristine area of the IRL, over 100 ha of seagrass completely disappeared from 1996 to 1997 and then recovered by 2000. Based on lagoon-wide mapping from aerial photographs taken every 2–3 years since 1986, coverage of seagrass in Turnbull Bay declined from 124 ha in 1989 to 34 ha by 1999 and increased to 58 ha in 2003. Bi-annual monitoring of fixed seagrass transects tells a more detailed story. Species composition along the Turnbull transect shifted fromHalodule wrightii toRuppia maritima beginning in 1995, and macroalgal abundance increased. By the summer of 1997, seagrass completely disappeared along the transect, as well as in most of the surrounding areas in Turnbull Bay; macroalgae covered much of the sediment surface. No significant water quality changes were detected. Light attenuation and suspended solid values did increase after the seagrass disappeared. Porewater sulfide concentrations, taken after all the grass was gone in 1997, were high (2,000 μM), but did improve by 1998 (1,200 μM). Seagrass recovery was rapid and occurred in the reverse sequence of species loss. Seedlings ofR. maritima were the first colonizers, then patches ofH. wrightii appeared. In 2000,Halophila engelmannii returned in the deeper water (>0.6m). By the summer of 2000, the beds had completely recovered. We conclude that this demise was a natural event caused by a long-term buildup of seagrass biomass and a thick (10–15 cm) layer of organic detritus and ooze. We surmise that such a crash and subsequent recovery may be a natural cycle of decline and recovery within this semirestricted, poorly-flushed area. The frequency of this cycle remains uncertain.     

A comparison of mercury in estuarine fish between Florida Bay and the Indian River Lagoon, Florida, USA

Concentrations of mercury (Hg) in fish were compared between two Florida estuaries, the Indian River Lagoon and Florida Bay. The objective was to determine if differences in Hg concentration exist and to attempt to relate those differences to sources of Hg. Five hundred and thirteen estuarine fish were collected and analyzed for Hg concentration. Fish species collected were black drum, bluefish, bonnethead shark, common snook, crevalle jack, gafftopsail catfish, gray snapper, Mayan cichlid, pompano, red drum, sheepshead, southern flounder, spadefish, and spotted seatrout. Analysis of variance of species-specific Hg data among the three defined regions of eastern and western Florida Bay and the Indian River Lagoon substantiated regional differences. Proximity to known anthropogenic sources of Hg appeared to be a significant factor in the distribution of Hg concentration among the fish collected. Sufficient numbers of crevalle jack, gray snapper, and spotted seatrout were collected to permit statistical analysis among regions. Hg concentrations in all three of these species from eastern Florida Bay were higher than those collected in the other two areas. A major fraction of the estuarine fish collected in eastern Florida Bay exceeded one or more State of Florida or U.S. Food and Drug Administration fish consumption health advisory criteria. In general, fish from western Florida Bay contained less Hg than those from the Indian River Lagoon, and fish from the Indian River contained less Hg than those from eastern Florida Bay. Crevalle jack from all areas and spotted seatrout from Florida Bay were placed on a consumption advisory in Florida. Detailed study of Florida Bay food web dynamics and Hg biogeochemical cycling is recommended to better understand the processes underlying the elevated Hg levels in fish from eastern Florida Bay. This information may be vital in the formulation of appropriate strategies in the ongoing South Florida restoration process.     

Tidal and nontidal flushing of Florida’s Indian River Lagoon

The flushing of Florida’s Indian River Lagoon is investigated as a response to tidal and low-frequency lagoon-shelf exchanges in the presence of freshwater gains and losses. A one-dimensional computer model uses the continuity equation to convert water-level variations into both advective transport within the lagoon and lagoon-shelf exchanges. The model also incorporates transport by longitudinal diffusion. Flushing is quantified by calculating the 50% renewal time, R₅₀, for each of 16 segments. R₅₀ is calculated for tidal exchanges enhanced by 0–30 cm nontidal fluctuations in coastal sea level, then for a range of rainfall rates. In both series of simulations, results suggest that in the northern sub-basin, R₅₀ increases dramatically with distance from the inlet due to relatively weak tidal and nontidal exchanges. A 50% renewal occurs in about one tidal cycle just inside Sebastian Inlet; at the northern end of the northern sub-basin, R₅₀ is over 230 d, and only coastal sea-level variations on the order of 30 cm and/or dry season rainfall rates decrease R₅₀ to less than 1 yr. R₅₀ is 1 wk or less throughout the central and southern sub-basins, where lagoon-shelf exchanges occur through two inlets. Simulations involving seasonal variations in precipitation and evaporation indicate that maximum and minimum rates of freshwater input lead minimum and maximum salinities by time periods on the order of 2–3 wk for the lagoon as a whole and in the northern sub-basin. The central and southern sub-basins respond in 1–2 wk.     

Setting seagrass depth, coverage, and light targets for the Indian River Lagoon system, Florida

Seagrass protection and restoration in Florida’s Indian River Lagoon system (IRLS) is a mutual goal of state and federal programs. These programs require, the establishment of management targets indicative of seagrass recovery and health. We used three metrics related to seagrass distribution: areal coverage, depth limit, and light requirement. In order to account for the IRLS’s spatial heterogeneity and temporal variability, we developed coverage and depth limit targets for each of its 19 segments. Our method consisted of two steps: mapping the union of seagrass coverages from all availabe mapping years (1943, 1986, 1989, 1992, 1994, 1996, and 1999) to delineate wherever seagrass had been mapped and determining the distribution of depth limits based on 5,615 depth measurements collected on or very near the deep-edge boundary of the union coverage. The frequency distribution of depth limits derived from the union coverage, along with the median (50th percentile) and maximum (95th percentile) depth limits, serve as the seagrass depth targets for each segment. The median and maximum depth targets for the IRLS vary among segments from 0.8 to 1.8 and 1.2 to 2.8 m, respectively.Halodule wrightii is typically the dominant seagrass species at the deep-edge of IRLS grass beds. We set light requirement targets by using a 10-yr record of light data (1990–1999) and the union coverage depth limit distributions from the most temporally stable seagrass segments. The average annual light requirement, based on the medians of the depth limit distributions, is 33 ± 17% of the subsurface light. The minimum annual light requirement, based on of the 95th percentile of the depth distributions, is 20 ± 14%; the minimum growing season light requirement (March to mid September) is essentially the same (20 ± 13%). Variation in depth limits and light requirements, is probably due to factors other than light that influence the depth limit of seagrasses (e.g., competition, physical disturbance). The methods used in this study are robust when applied to large or long-term data sets and can be applied to other estuaries where grass beds are routinely monitored and mapped.     

Effects of the 2004 hurricanes on the fish assemblages in two proximate southwest Florida estuaries: Change in the context of interannual variability

We examined interannual differences in fish assemblage structure in Tampa Bay and Charlotte Harbor, Florida, from 1996 to 2005 to reveal the extent of hurricane-induced changes in relation to multiannual variability for five different assemblages in each estuary: small-bodied fishes (<generally 80-mm standard length) along river shorelines, in river channels, along bay shorelines, and on the bay shelf (<1.5-m water depth); and large-bodied fishes (>generally 100-mm standard length) along bay shorelines. Fish assemblages tended to differ, between estuaries, as did interannual variability in assemblage structure. In the lower portions of tributary rivers to Tampa Bay, the small-bodied shoreline fish assemblage during August 2004 to July 2005, i.e., during and after the multiple hurricanes, was different from assemblages of August to July in previous years. This may have been a result of physical displacement of fish or suboptimal salinities caused by increased freshwater inflow. The small-bodied shoreline fish assemblage in Charlotte Harbor also differed between prehurricane and hurricane periods, possibly because damage to vegetated shorelines affected fish survival through a decrease in feeding and refuge habitats. In the remaining habitats, fish assemblage structure from August 2004 to July 2005 were within the range of variability exhibited over the 9-yr study period. There were several unusual fish assemblages that appeared to be attributable to drought conditions (1996, 1999–2000), suggesting that other major environmental perturbations may be as important as hurricanes in influencing assemblage structure. We conclude that although the 2004 hurricane season affected some of the fish assemblages of Tampa Bay and charlotte Harbor, these assemblages generally appeared quite resilient to natural environmental perturbations from a decadal perspective.     

Effects of two hurricanes onSyringodium filiforme, manatee grass, within the Loxahatchee River estuary, Southeast Florida

In September 2004, the Loxahatchee River Estuary was affected by Hurricanes Frances and Jeanne, which resulted in a monthly rainfall record of 610 mm and abnormally high freshwater discharges to the system. The occurrence, density, and biomass ofSyringodium filiforme in the Loxahatchee River Estuary declined significantly following the September 2004 storms based on 15 mo of pre-hurricane monitoring and 12 mo of post-hurricane monitoring. Throughout posthurricane monitoring,S. filiforme showed no sign of recovery, thoughHalophila johnsonii increased considerably during the post-hurricane period. Freshwater discharges resulting from the September 2004 hurricanes lowered minimum daily salinity values to near zero and increased standard deviation of daily salinity values to 11‰. Extremely low minimum daily salinity values and high daily salinity fluctuations likely resulted in the observed decline ofS. filiforme. We advise the use of minimum daily salinity values when assessing seagrass habitat suitability or when modeling the effects of alternative water management scenarios.     

Climatic Trends and Temporal Patterns of Phytoplankton Composition, Abundance, and Succession in the Indian River Lagoon, Florida, USA

This paper describes the results of 10 years of water quality monitoring in the Indian River Lagoon Florida, with special emphasis on the relationships between trends in climatic conditions and the distribution, composition, and abundance of the phytoplankton community. The Indian River Lagoon, which spans 220 km of Florida’s east coast, is a region of particular concern because of the rapid rate of human development throughout the region and the hydrologically restricted character of the lagoon, which heightens the potential for algal bloom. Water sampling was carried out on a monthly to twice-monthly basis at six sites located in the northern and central lagoon. The 10-year study included both extended periods of below and above average rainfall. A number of ecologically distinct regions exist within the lagoon, which differ considerably in water exchange properties and watershed inputs. The northern lagoon is characterized by longer water residence times, lower phosphorus concentrations, higher nitrogen concentrations, and more stable salinity conditions than the central lagoon. Mean phytoplankton biovolumes were substantially higher at the sites in the northern lagoon than at the sites in the central lagoon, and algal blooms were more common and intense in the former region. Inter-annual patterns of phytoplankton biovolume were also different in the northern and central lagoon. In the northern lagoon, phytoplankton biovolumes were lowest during the drought period, from the autumn of 1998 to the spring of 2001. By contrast, algal bloom events in the central lagoon were not only less frequent but were not tied to periods of high rainfall. The most widespread and common bloom formers were the potentially toxic dinoflagellate Pyrodinium bahamense var. bahamense and two centric diatoms, Dactyliosolen fragilissimus and Cerataulina pelagica. Many of the biovolume peaks observed over the study period were attributable to these three species. The results of time series modeling of phytoplankton dynamics further highlighted the disparities between the two regions of the lagoon in terms of the suite of parameters that best predict the observed trends in the biomass of phytoplankton. Overall, the outcome of this initial modeling effort in the Indian River Lagoon suggests that time series approaches can help define the factors that influence phytoplankton dynamics.     

Production and nutrient dynamics of aSyringodium filiforme Kütz. Seagrass bed in Indian River Lagoon,Florida

A year-long analysis of the characteristics of the seagrassSyringodium filiforme and the associated dynamics of the nutrient pool in the sediment pore water was done to assess co-variation. Changes in seagrass growth rate and standing stock throughout the year were accompanied by seasonal changes in the nutrient pools. The link between plant production and morphometrics and the sediment nutrient pool was found to be predominantly physiological, with the plant balancing the ability to photosynthesize with the nutrients needed for maintaining production. Measurements of whole plant growth for this seagrass, rather than the more typical leaf growth measurements, show that the production of new shoots and rhizome elongation for these plants represents as substantial amount of growth that usually goes unmeasured. Further, these whole plant growth measures demonstrate the rapid lateral rhizome spread of this species, exceeding one meter per plant per year. The primary cause of seasonal variation in the yearly seagrass cycle was investigated. Correlation analysis supported the hypothesis that the major factor controlling seasonal variation in this seagrass was light. During the peak growing season, however, growth was not regulated by light but by nitrogen. Depletion of the sediment ammonium pool and reduction in pore water ammonium relative to adsorbed ammonium, as well as changes in N content of seagrass leaves, support our hypothesis of peak growing season nitrogen limitation. Our results forSyringodium filiforme in terrigenous sediments are in contrast to our recent findings of phosphorus limitation in this same species occurring in carbonate sediments.     

Biodeposition by a fouling community in the Indian River,Florida

Biodeposition rates were studied for a fouling community with a biomass of 6–10 kg per m² dry wt including shells in which the barnacle Balanus eburneus was a dominant species. The fouling community filtered Indian River lagoon water containing 2–15 mg per 1 mud-size particles and deposited them as sand-size fecal pellets. Measurements of the fecal pellet flux by sediment traps indicated seasonal variations between 16.7 and 74.8 g per m² per day. A significant correlation was found between fecal pellet flux and temperature (r=0.90; p<0.001). The average flux of fecal pellet deposition was four times greater than the average flux of suspended particle settling without biological influence. Suspended sediment concentration did not significantly affect the rate of biodeposition. Annual biodeposition was 18 kg per m².     

Submarine groundwater discharge is an important net source of light and middle REEs to coastal waters of the Indian River Lagoon, Florida, USA

Porewater (i.e., groundwater) samples were collected from multi-level piezometers across the freshwater-saltwater seepage face within the Indian River Lagoon subterranean estuary along Florida’s (USA) Atlantic coast for analysis of the rare earth elements (REE). Surface water samples for REE analysis were also collected from the water column of the Indian River Lagoon as well as two local rivers (Eau Gallie River, Crane Creek) that flow into the lagoon within the study area. Concentrations of REEs in porewaters from the subterranean estuary are 10-100 times higher than typical seawater values (e.g., Nd ranges from 217 to 2409 pmol kg⁻¹), with submarine groundwater discharge (SGD) at the freshwater-saltwater seepage face exhibiting the highest REE concentrations. The elevated REE concentrations for SGD at the seepage face are too high to be the result of simple, binary mixing between a seawater end-member and local terrestrial SGD. Instead, the high REE concentrations indicate that geochemical reactions occurring within the subterranean estuary contribute substantially to the REE cycle. A simple mass balance model is used to investigate the cycling of REEs in the Indian River Lagoon and its underlying subterranean estuary. Mass balance modeling reveals that the Indian River Lagoon is approximately at steady-state with respect to the REE fluxes into and out of the lagoon. However, the subterranean estuary is not at steady-state with respect to the REE fluxes. Specifically, the model suggests that the SGD Nd flux, for example, exported from the subterranean estuary to the overlying lagoon waters exceeds the combined input to the subterranean estuary from terrestrial SGD and recirculating marine SGD by, on average, ∼100 mmol day⁻¹. The mass balance model also reveals that the subterranean estuary is a net source of light REEs (LREE) and middle REEs (MREE) to the overlying lagoon waters, but acts as a sink for the heavy REEs (HREE). Geochemical modeling and statistical analysis further suggests that this fractionation occurs, in part, due to the coupling between REE cycling and iron redox cycling within the Indian River Lagoon subterranean estuary. The net SGD flux of Nd to the Indian River Lagoon is ∼7-fold larger than the local effective river flux to these coastal waters. This previously unrecognized source of Nd to the coastal ocean could conceivably be important to the global oceanic Nd budget, and help to resolve the oceanic “Nd paradox” by accounting for a substantial fraction of the hypothesized missing Nd flux to the ocean.     

Spawning of the red drum in Mosquito Lagoon,East-Central Florida

A study was carried out in fall 1987 to determine if red drum (Sciaenops ocellatus) spawned in the southern portion of Mosquito Lagoon, Florida, 30 km from the nearest tidal pass. Weekly plankton tows were taken from mid-September to mid-November. Floating sciaenid eggs were removed from the samples and incubated 16–36 h: 329 red drun eggs were hatched. Viable red drum eggs were collected from October 27 to November 18 at salinities of 29‰ to 32‰ and water temperatures of 21°C to 23°C. The largest number of eggs was collected on November 4, during a full moon. This is the first documentation of red drum spawning in an estuary. The physiography and high salinity (which are more characteristic of marine than estuarine waters) of Mosquito Lagoon were probable factors in producing this phenomenon.     

Responses of common fouling organisms in the Indian River,Florida, to various predation and disturbance intensities

The response of some common fouling organisms to increased predation by scraping and decreased predation by caging is described. Substrate coverage by many colonial forms such as Perophora viridis and Diplosoma macdonaldi was not affected by changes in predation intensity whereas coverage by many solitary forms such as Spirorbis sp. and Styela plicata increased when predation was reduced. These differences in responses of colonial and solitary species may be because solitary species reproduce sexually and resettle newly opened space whereas colonial species can rapidly expand adjacent colonies into newly cleared space.     

Notes on the occurrence,distribution, and biology of elasmobranch fishes in the Indian River lagoon system,Florida

Fifteen species of elasmobranchs, eight sharks and seven rays, have been recorded with reasonable certainty from the Indian River lagoon system on the central east coast of Florida. We collected four shark and six ray species during a three and one-half year study of the northern portion of the lagoon system. Five of these appear to be year-round residents, and the remainder utilize the area only at restricted times of the year or as a nursery ground. The most abundant resident species areDasyatis sayi, D. sabina, andCarcharhinus leucas. Pristis pectinata, once a common resident species, has been extirpated from the lagoons. The distribution of ocean inlets and salinity appear to be major factors affecting diversity and numbers of elasmobranchs in the Indian River system.     

Seasonal variation in standing crop of the seagrassSyringodium filiforme and associated macrophytes in the Northern Indian River,Florida

Seasonal variation in the standing crop of the seagrassSyringodium filiforme and its associated macrophytes was studied in a northern basin of the Indian River, a large mesohaline lagoon in central Florida, near the northern distributional limit ofS. filiforme. The minimum standing crop occurred from February through April and the maximum in September. Two other seagrasses,Halodule wrightii andHalophila engelmannii, together with a drift algal community, occurred in the study quadrat, but were not major components of the macrophytic system. The formation of sizeable sandy patches within Indian River seagrass beds is partially due to the burrowing activities ofLimulus polyphemus. Thermal stresses associated with the northern geographicalS. filiforme range may contribute to this phenomenon by restricting annual production, hence limiting patch regrowth.     

Monitoring and Modeling of Syringodium filiforme (Manatee Grass) in Southern Indian River Lagoon

Decreased salinity and submarine light associated with hurricanes of 2004?C2005 impacted seagrass habitats in the Florida coastal zone. A combination of salinities ??20 and light attenuation ??1.5?m^?1 resulting from the freshwater discharge in 2005 were among the drivers for a widespread decrease in the coverage and biomass of Syringodium filiforme (manatee grass) in 2006. These observations provided an opportunity to develop and apply a modeling framework to simulate responses of S. filiforme to variable water quality. The framework connects water column variables to field monitoring of seagrass abundance and salinity growth response experiments. The base model was calibrated with macrophyte abundance observed in southern Indian River Lagoon (IRL) from 2002 to 2007 and tested against shoot data from a different time (1997?C2002) and nearby location in the IRL. Model shoot biomass (gC?m^?2) was similar to field observations (r ²?=?0.70) while responding to monthly seasonal fluctuations in salinity and light throughout the 6-year simulations. Field and model results indicated that S. filiforme growth and survival were sensitive to, and increased with, rising salinity throughout 2007. This modeling study emphasizes that discharge, salinity, and submarine light are inter-dependent variables affecting South Florida seagrass habitats on seasonal to inter-annual time scales.     

Influence of sequential hurricanes on nekton communities in a Southeast Florida estuary: Short-term effects in the context of historical variations in freshwater inflow

We examined nekton community-level responses to Hurricanes Frances and Jeanne, which made landfall 20 d apart in the St. Lucie estuary in southeastern Florida in 2004. The passage of these storms contributed to large freshwater discharges that exceeded 150 m³ s⁻¹, as well as estuary-wide reductions in salinity and near-hypoxic conditions in the North Fork of the estuary that persisted for several months. Although such environmental variations are not uncommon, seasonal patterns of community structure were disturbed throughout much of the estuary, likely in response to uncharacteristically-rapid reductions in salinity. Immediately following the hurricanes, abundances of several freshwater and oligohaline taxa (i.e., blue crabCallinectes sapidus, shadDorosoma spp., and ladyfishElops saurus) increased markedly in the inner estuary, while abundances of several other fishes (i.e., striped mulletMugil cephalus, white mulletM. curema, lookdownSelene vomer, pigfishOrthopristis chrysoptera, and pinfishLagodon rhomboides) declined. Nekton communities recovered quickly, and by spring, community structure throughout much of the estuary was indistinguishable from pre-hurricane conditions. Although nekton communities were resilient to hurricane-related disturbances, projected increases in Atlantic hurricane activity and associated freshwater discharges over the coming decades may test the resilience of estuarine communities in Florida.     

Marine,brackish, and freshwater fish communities in the vegetated and bare shallows of an Australian Coastal River

Fish communities found in the marine, brackish, and freshwater shallows of the Clarence River (New South Wales, Australia) were sampled over a 12-mo period to compare communities inhabiting bare and vegetated substrata. A total of 26,107 fish representing 57 species and 36 families was collected biomonthly suing a 6-mm mesh siene. Permanent residents (i.e., species found throughout the year) were primarily gobies (Gobiidae) and gudgeons (Eleotridae). Juveniles of many species found as adults in other parts of the river were seasonally abundant in the shallows. Most numerous was a small ambassid, the glassy perchlet (Ambassis jacksoniensis), the majority of which was collected from marine and brackish regions of the river. Firetail gudgeons (Hypseleotris compressus) were caught in highest numbers at the freshwater sites. Cluster analysis suggested that fish communities in widely separated vegetated sites were more similar to each other than to those in adjacent bare sites. Shallow vegetated (Zostera capricorni) habitats in the marine region of the river had greatest diversity and highest abundances of fish, particularly during recruitment periods. At these times, juveniles of many commercially important species were captured, including yellowfin bream (Acanthopagrus australis), sea mullet (Mugil cephalus), flat-tail mullet (Liza agentea), tarwhine (Rhabdosargus sarba), luderick (Girella tricuspidata), silver biddy (Gerres subfasciatus), and sand whiting (Sillago ciliata). The vegetated (Vallisneria gigantea) sites in the brackish region also had significantly more species and individuals during recruitment periods (spring) than bare sites. Although freshwater vegetated sites consistently had more individuals than freshwater bare sites, there were no significant differences in species richness between vegetated and bare habitats. The need to conservatively manage shallow-water fish habitats is stressed. *** DIRECT SUPPORT *** A01BY073 00004     

The ecological effects of structural flood mitigation works on fish habitats and fish communities in the lower Clarence River system of South-Eastern Australia

The effects of flood mitigation structures on the quality of estuarine and freshwater fish habitats in the lower Clarence River system of south-eastern Australia were investigated. Surrounding land use, fringing vegetation, overall level of habitat disturbance, distance from the sea, salinity, and water temperature were examined and compared between four sites on natural tributary streams, four sites on channelized flood mitigation drains gated at their mouths, and ten paired sites (five below and five above floodgates) on flood mitigation drains in this system, from mid 1988 to late 1990. Quantitative sampling of the fish fauna at each of these sites was conducted quarterly over this 21/2-yr period. Juvenile fishes were sampled using netting enclosures together with application of the ichthyocide rotenone, while subadults and adults were sampled using multiple-panel gill nets. In general, fish habitats in the flood mitigation drains, and especially those above flood gates, had more intensive surrounding land uses, less natural native fringing vegetation and, overall, were more highly disturbed than those in the natural tributaries. Salinity at the various study sites was largely dependent on the pattern of seasonal (mainly summer and autumn) rainfall and distance upstream from the sea. Salinities usually differed only slightly between gated and ungated sites at similar distances from the sea, indicating that the floodgates were generally ineffective in preventing the penetration of saline river water into the drains immediately above them. These gates were, however, very effective in preventing the establishment of fringing mangrove vegetation in the drains above them. The main ecological effects of these flood mitigation works have thus been to generally degrade the overall quality of available fish habitat, particularly in terms of reductions in natural fringing vegetation (mangroves in the more estuarine-dominated areas and overhanging terrestrial trees in the more freshwater-dominated areas often being replaced by grassess and rushes), and to increase the intensity of surrounding land use (natural forest often being cleared and wetlands drained for cattle grazing and sugarcane growing), both of these factors contributing to increases in generalized aquatic habitat disturbance. Results from the study of the fish assemblages in these natural and man-altered habitats revealed the following general patterns. Highest fish species numbers and abundances occurred in the ungated natural tributaries and in drains downstream of floodgates. These habitats also contained the largest proportions of both commercial fish species and individuals as well as the majority of species and individuals with marine-estuarine affinities. Both total and commercial fish species numbers generally declined with decreasing salinity and increasing distance of the sampling sites from the sea. Even through saline waters from the main river system penetrated the majority of the floodgates during most of the study period, fish passage through these gates was found to be very restricted. Fish assemblages above such gates were generally dominated by primarily freshwater species, as compared with primarily saltwater (estuarine-marine) species below. The conversion of the great majority of small mangrove-fringed tributaries in the lower reaches of this river system into uniform floodgated drainage channels has thus resulted in the destruction of, and impeded fish access to, large areas of previously available estuarine fish nursery and feeding habitat. These drainage changels are now dominated by terrestrial-freshwater vegetation above where they are cut off from the main river channels by the floodgates, and the period of their construction has coincided with that of reported declines in fish catches in this river system. On the basis of the above findings, it is recommended that these floodgates be left fully open at all times except immediately prior to and during floods in the river system, thus facilitating the re-establishment of fringing mangrove vegetation along the banks of the artificial drains in the lower reaches, generally improving flushing and thus water quality in these drains, and allowing the establishment of primarily estuarine-marine fish communities, including more species of economic importance, in them.     

Retrospective analysis of the impacts of major hurricanes on sediments in the lower Everglades and Florida Bay

A record of the impacts of major hurricanes on sediment stratigraphy and composition in subtropical ecosystems has been preserved in the lower Everglades and Florida Bay. These impacts were observed in discontinuous layers of sediment that were identified from high-resolution, vertical profiles of excess ²¹⁰Pb and ¹³⁷Cs. Discontinuities were found at different geographic locations and at two to three different depths in the sediment column; however, the layers were each deposited within time periods that corresponded with the passing of category 3–5 hurricanes during 1960, 1948 and 1935. A simple mass balance model for excess ²¹⁰Pb was used to show net changes of ±20–100% in excess ²¹⁰Pb inventory that resulted from sediment disturbances of <1 to >22 cm. Abrupt shifts in sediment composition were often observed in hurricane-impacted layers. Ratios of organic (C/P) were four- to fivefold higher than normal in post-hurricane layers of sediment at open bay sites. These layers are phosphorus poor and seem to reflect preferential decomposition of organic P relative to organic C in association with hurricanes. The net effect is for major hurricanes to redistribute sediment, organic matter and nutrients.This revised version was published online in July 2003.