Fine‐scale phylogeography reveals cryptic biodiversity in Pederson's cleaner shrimp,Ancylomenes pedersoni (Crustacea: Caridea: Palaemonidae), along the Florida Reef Tract

Populations of continuously distributed marine organisms that disperse via pelagic larvae are often assumed to exist in a state of genetic panmixia because of their potential ability for long‐distance dispersal. However, obligate symbionts may have more restricted gene flow due to recruitment limitations, making host specificity an important potential driver of biodiversity. To explore the tension between broad dispersal ability and limited recruitment potential, we used sequences of mtDNA cytochrome c oxidase subunit I (COI) to assess the fine‐scale phylogeography of the cleaner shrimp, Ancylomenes pedersoni, an obligate symbiont of sea anemones, along 300 km of the Florida Reef Tract (FRT). The results indicate high genetic diversity within A. pedersoni populations along the FRT. Pair‐wise ?_ST values indicate significant genetic structuring between northern (Fort Lauderdale and Upper Keys) and southwestern (Lower Keys) populations, with significant isolation by distance. Two divergent COI haplotype lineages were detected through statistical parsimony analysis: one evenly distributed across the entire FRT (Clade 1) and one found primarily in two sample localities in the Lower Keys (Clade 2). Phylogenetic analyses using 16S‐rDNA indicates that this genetic diversity is of paraphyletic origin, and possibly the result of multiple colonization events. These results reveal a complex demographic and evolutionary history for A. pedersoni populations and provide the first evidence of highly divergent intra‐specific lineages independently colonizing the FRT. Because the FRT is a highly impacted coral reef system, understanding phylogeographic patterns along it has value beyond documentation of the factors that generate genetic diversity in tropical reef systems: these data are critical for creating scientifically based management strategies.     

Phylogeography of Acesta clams from submarine seamounts and escarpments along the western margin of North America

Genetic connectivity and habitat characteristics were examined in two species of Acesta clams (Bivalvia: Limidae) from submarine seamounts and continental slopes along the western North America margin. Two species were identified from dive videos obtained with submarine remotely operated vehicles that surveyed a 2200‐km range between 27° and 46° N latitude. Acesta sphoni was only found at shallower habitats (545–860 m depth) in the southern part of this range, whereas Acesta mori was more abundant and widely distributed in deeper habitats (1029–1996 m). Both species occurred on seamounts and on the walls of submarine canyons and continental slopes. Segregation of these species by depth exposes them to correlated differences in water temperatures and dissolved oxygen concentrations. Ninety‐eight individuals sampled from seven seamounts and one escarpment locality were characterized with DNA‐barcodes based on 643 base pairs of mitochondrial cytochrome‐c ‐oxidase subunit I (COI). Further analysis of these sequences revealed no significant geographical subdivision across the sampled range. This lack of differentiation suggests ongoing genetic exchange between the seamount populations and those possibly distributed along the continental margins. Examination of regional bathymetric profiles suggested that an abundance of suitable habitat might exist along these margins.     

A pilot study of genetic differentiation between two phenotypes of a Mediterranean population of the bivalve Cerastoderma glaucum and genetic discrimination with other Cerastoderma glaucum and Cerastoderma edule populations outside the Mediterranean

The internal transcribed spacer 1 (ITS1) region of 29 individuals of Cerastoderma glaucum (from the Mediterranean Sea, the Atlantic and the North Sea) and 18 individuals of Cerastoderma edule (from the Atlantic and the North Sea) and the cytochrome c oxidase subunit I (COI) region of 43 individuals of C. glaucum (from the Mediterranean Sea, the Atlantic and the North Sea) and 9 individuals of C. edule (from the Atlantic and the North Sea) were PCR amplified and sequenced. The ITS1 sequences led us to describe 27 genetic haplotypes, while 21 genetic haplotypes were determined via the COI sequences. The ITS1 and the COI sequences revealed an important genetic variability within the Mediterranean population of C. glaucum, which contained two different phenotypes: orange foot and yellow foot. A genetic differentiation between the two phenotypes was revealed by the nucleotide diversity index (π) and is strengthened by the AMOVA analysis. This result leads us to suspect the presence of two different groups in the same population of C. glaucum. Nevertheless to be confirmed this hypothesis requires further studies using more locations and a larger number of sample sizes.