A simple empirical optical model for simulating light attenuation variability in a partially mixed estuary

Representation of the subsurface light field is a crucial component of pelagic ecosystem and water quality models. Modeling the light field in estuaries is a particularly complicated problem due to the significant influence of high concentrations of dissolved and particulate matter that are derived from both terrestrial and estuarine sources. The goal of this study was to develop a relatively simple but effective way to model light attenuation variability in a turbuid estuary (Chesapeake Bay, United States) in a coupled physical-biological model. We adopted a simple, nonspectral empirical approach. Surface water quality data (salinity was used as a proxy of chromophoric dissolved organic matter [CDOM]) and light measurements from the Chesapeake Bay Program were used to determine the absorption coefficients in a linear attenuation model using regression methods. This model predicts K_c (specific attenuation due to phytoplankton/chlorophylla [chla]), K_t (specific attenuation due to total suspended solids), and K_s (a function of specific attenuation coefficients of CDOM in relation to salinity). The Bay-wide fitted relation between the light attenuation coefficient and water quality concentrations gives generally good estimates of total light attenuation, K_d. The direct inclusion of salinity in the relationship has one disadvantage: it can yield negative values for K_d at high salinities. We developed two separate models for two different salinity regimes. This approach, in addition to solving the negative K_d problem, also accounts for some changes in specific light absorption by chla, seston (nonphytoplankton particulate matter), and CDOM that apparently occur in different salinity regimes in Chesapeake Bay. The resulting model predicts the statistical characteristics (i.e., the mean and variance) of K_d quite accurately in most regions of Chesapeake Bay. We also discuss in this paper the feasibility and caveats of using K_d converted from Secchi depth in the empirical method.     

Calibration of a Bio-optical Model in the North River, North Carolina (Albemarle–Pamlico Sound): A Tool to Evaluate Water Quality Impacts on Seagrasses

Seagrasses are typically light limited in many turbid estuarine systems. Light attenuation is due to water and three optically active constituents (OACs): nonalgal particulates, phytoplankton, and colored dissolved organic matter (CDOM). Using radiative transfer modeling, the inherent optical properties (IOPs) of these three OACs were linked to the light attenuation coefficient, K _PAR, which was measured in North River, North Carolina, by profiles of photosynthetically active radiation (PAR). Seagrasses in the southern portion of Albemarle-Pamlico Estuarine System (APES), the second largest estuary in the USA, were found to be light limited at depths ranging from 0.87 to 2 m. This corresponds to a range of K _PAR from 0.54 to 2.76 m^?1 measured during a 24-month monitoring program. Turbidity ranged from 2.20 to 35.55 NTU, chlorophyll a from 1.56 to 15.35 mg m^?3, and CDOM absorption at 440 nm from 0.319 to 3.554 m^?1. The IOP and water quality data were used to calibrate an existing bio-optical model, which predicted a maximum depth for seagrasses of 1.7 m using annual mean water quality values and a minimum light requirement of 22% surface PAR. The utility of this modeling approach for the management of seagrasses in the APES lies in the identification of which water quality component is most important in driving light attenuation and limiting seagrass depth distribution. The calibrated bio-optical model now enables researchers and managers alike to set water quality targets to achieve desired water column light requirement goals that can be used to set criteria for seagrass habitat protection in North Carolina.     

Calculating optical water quality targets to restore and protect submersed aquatic vegetation: Overcoming problems in partitioning the diffuse attenuation coefficient for photosynthetically active radiation

Submersed aquatic vegetation (SAV) is an important component of shallow water estuarine systems that has declined drastically in recent decades. SAV has particularly high light requirements, and losses of SAV have, in many cases, been attributed to increased light attenuation in the water column, frequently due to coastal eutrophication. The desire to restore these valuable habitats to their historical levels has created the need for a simple but accurate management tool for translating light requirements into water quality targets capable of supporting SAV communities. A procedure for calculating water quality targets for concentrations of chlorophyll and total suspended solids (TSS) is derived, based on representing the diffuse attenuation coefficient for photosynthetically active radiation, K_d(PAR), as a linear function of contributions due to water plus colored dissolved organic matter (CDOM), chlorophyll, and TSS. It is assumed that K_d(PAR) conforms to the Lambert-Beer law. Target concentrations are determined as the intersection of a line representing intended reduction of TSS and chlorophyll by management actions, with another line describing the dependence of TSS on chlorophyll at a constant value of K_d(PAR). The validity of applying the Lambert-Beer law to K_d(PAR) in estuarine waters was tested by comparing the performance of a linear model of K_d(PAR) with data simulated using a more realistic model of light attenuation. The linear regression model tended to underestimate K_d(PAR) at high light attenuation, resulting in erroneous predictions of target concentrations at shallow restoration depths. The errors result more from the wide spectral bandwidth of PAR, than from irrecoverable nonlinearities in the diffuse attenuation coefficient per se. In spite of the failure of the Lambert-Beer law applied to K_d(PAR), the variation of TSS with chlorophyll at constant K_d(PAR) determined by the more mechanistic attenuation model was, nevertheless, highly linear. Use of the management tool based on intersecting lines is still possible, but coefficients in the line describing the dependence of TSS on chlorophyll at constant K_d(PAR) must be determined empirically by application of an optical model suitably calibrated for the region of interest. An example application of the procedure to data from the Rhode River, Maryland, indicates that approximately 15% reduction in both TSS and chlorophyll concentrations, or 50% reduction in chlorophyll alone, will be needed to restore conditions for growth of SAV to levels that existed in the late 1960s.     

Light requirements of seagrassesHalodule wrightii andSyringodium filiforme derived from the relationship between diffuse light attenuation and maximum depth distribution

The correspondence between maximum depth of growth (Z_max) for two seagrases,Halodule wrightii andSyringodium filiforme, and the attenuation of diffuse photosynthetically active radiation (K_dPAR) were evaluated over a 3.5-yr period in the southern Indian River Lagoon, Florida. The lower limit of seagrass depth distribution was controlled by light availability. Both species grew to the same maximum depth, indicating they have similar minimum light requirements. Based on average annual values of K_dPAR, estimates of seagrass minimum light requirements ranged from 24% to 37% of the light just beneath the water surface (I_o), much hgiehr than a photic zone for many phytoplankton and macroalgae (1–5% incident light). In less transparent waters of Hobe Sound, where turbidity (NTU) and color (Pt-Co) had their highest concentrations, minimum light requirements for growth were greatest. These results suggest that more sophisticated optical models are needed to identify specific water quality constituents affecting the light environment of seagrasses. Water quality criteria and standards needed to protect seagrasses from decreasing water transparency must be based on parameters that can be routinely measured and reasonably managed.     

Suspended Matter,Chl-a,CDOM, Grain Sizes,and Optical Properties in the Arctic Fjord-Type Estuary,Kangerlussuaq, West Greenland During Summer

Optical constituents as suspended particulate matter (SPM), chlorophyll (Chl-a), colored dissolved organic matter (CDOM), and grain sizes were obtained on a transect in the arctic fjord-type estuary Kangerlussuaq (66°) in August 2007 along with optical properties. These comprised diffuse attenuation coefficient of downwelling PAR (K _d(PAR)), upwelling PAR (K _u(PAR)), particle beam attenuation coefficient (c _p), and irradiance reflectance R(−0, PAR). PAR is white light between 400 and 700 nm. The estuary receives melt water from the Greenland Inland Ice and stations covered a transect from the very high turbid melt water outlet to clear marine waters. Results showed a strong spatial variation with high values as for suspended matter concentrations, CDOM, diffuse attenuation coefficient K _d(PAR), particle beam attenuation coefficients (c _p), and reflectance R(−0, PAR) at the melt water outlet. Values of optical constituents and properties decreased with distance from the melt water outlet to a more or less constant level in central and outer part of the estuary. There was a strong correlation between inorganic suspended matter (SPMI) and diffuse attenuation coefficient K _d(PAR) (r ² = 0.92) and also for particle beam attenuation coefficient (c _p; r ² = 0.93). The obtained SPMI specific attenuation—K _d^*(PAR) = 0.13 m² g⁻¹ SPMI—and the SPMI specific particle beam attenuation—c _p^* = 0.72 m² g⁻¹—coefficients were about two times higher than average literature values. Irradiance reflectance R(−0, PAR) was comparatively high (0.09−0.20) and showed a high (r ² = 0.80) correlation with K _u(PAR). Scattering dominated relative to absorption—b(PAR)/a(PAR) = 12.3. Results strongly indicated that the high values in the optical properties were related to the very fine particle sizes (mean = 2–6 μm) of the suspended sediment. Data and results are discussed and compared to similar studies from both temperate and tropical estuaries.     

Optical Changes in a Eutrophic Estuary During Reduced Nutrient Loadings

Loss of water clarity is one of the consequences of coastal eutrophication. Efforts have therefore been made to reduce external nutrient loadings of coastal waters. This paper documents improvements to water clarity between 1985 and 2008–2009 at four stations in the microtidal estuary Roskilde Fjord and find significant relationships to freshwater nutrient loadings. The paper then investigates to which extent changes in phytoplankton biomass (chlorophyll a (Chl a)), non-algal particulate organic matter (POM*), and residual attenuation in the water (K _b), respectively, can account for this optical improvement. Vertical light attenuation (K _d) declined, on average, by 34 %, accompanying a 71 % reduction of Chl a and an 80 % reduction of POM*. Residual attenuation declined by 26 % over the period in accordance with a measured 34 % decline of dissolved organic nitrogen. Analysis of simultaneous changes in light attenuation and Secchi depth also suggested a reduction of the scatter-to-absorption ratio over time. Considering the stronger reductions of particle concentrations than dissolved organic matter, the contribution of residual attenuation to vertical attenuation increased from 54 to 74 % in 1985 to 78 to 85 % in 2008–2009. Overall, efforts to reduce nutrient loading and improve water clarity appeared to have had a larger impact on POM* than on Chl a and colored dissolved organic matter concentrations in the estuary, which can account for the decrease in the scatter-to-absorption ratio. These optical changes lead to larger improvements of Secchi depth than of vertical light attenuation. The consequence of this is an overestimation (0.45–1.48 m) of the predicted increase of potential seagrass depth limits when based on Secchi depth rather than K _d.     

Spatial and temporal characteristics of nutrient and phytoplankton dynamics in the York River Estuary, Virginia: Analyses of long-term data

Ten years (1985–1994) of data were analyzed to investigate general patterns of phytoplankton and nutrient dynamics, and to identify major factors controlling those dynamics in the York River Estuary, Virginia. Algal blooms were observed during winter-spring followed by smaller summer blooms. Peak phytoplankton biomass during the winter-spring blooms occurred in the mid reach of the mesohaline zone whereas peak phytoplankton biomass during the summer bloom occurred in the tidal fresh-mesohaline transition zone. River discharge appears to be the major factor controlling the location and timing of the winter-spring blooms and the relative degree of potential N and P limitation. Phytoplankton biomass in tidal fresh water regions was limited by high flushing rates. Water residence time was less than cell doubling time during high flow seasons. Positive correlations between PAR at 1 m depth and chlorophylla suggested light limitation of phytoplankton in the tidal fresh-mesohaline transition zone. Relationships of salinity difference between surface and bottom water with chlorophylla distribution suggested the importance of tidal mixing for phytoplankton dynamics in the mesohaline zone. Accumulation of phytoplankton biomass in the mesohaline zone was generally controlled by N with the nutrient supply provided by benthic or bottom water remineralization.     

Vertical diffuse attenuation coefficient (Kd) based optical classification of IRS-P3 MOS-B satellite ocean colour data

The optical classification of the different water types provides vital input for studies related to primary productivity, water clarity and determination of euphotic depth. Image data of the IRSP3 MOS-B, for Path 90 of 27th February, 1998 was used for deriving vertical diffuse attenuation coefficient (K_d) and an optical classification based onK _d values was performed. An atmospheric correction scheme was used for retrieving water leaving radiances in blue and green channels of 412, 443, 490 and 550 nm. The upwelling radiances from 443 nm and 550 nm spectral channels were used for computation of vertical diffuse attenuation coefficientK _d at 490 nm. The waters off the Gujarat coast were classified into different water types based on Jerlov classification scheme. The oceanic water type IA (K _d range 0.035-0.040m^-1), type IB (0.042-0.065 m^-1), type II (0.07-0.1m^-1) and type III (0.115-0.14m^-1) were identified. For the coastal waters along Gujarat coast and Gulf of Kachchh, K_d(490) values ranged between 0.15 m^-1 and 0.35 m^-1. The depth of 1% of surface light for water type IA, IB, II and III corresponds to 88, 68, 58 and 34 meters respectively. Classification of oceanic and coastal waters based onK _d is useful in understanding the light transmission characteristics for sub-marine navigation and under-water imaging.     

Alternation of factors limiting phytoplankton production in the Cape Fear River Estuary

Phytoplankton nutrient limitation experiments were performed from 1994 to 1996 at three stations in the Cape Fear River Estuary, a riverine system originating in the North Carolina piedmont. Nutrient addition bioassays were conducted by spiking triplicate cubitainers with various nutrient combinations and determining algal response by analyzing chlorophyll a production and ¹⁴C uptake daily for 3 d. Ambient chlorophyll a, nutrient concentration, and associated physical data were collected throughout the estuary as well. At a turbid, nutrient-rich oligohaline station, significant responses to nutrient additions were rare, with light the likely principal factor limiting phytoplankton production. During summer at a mesohaline station, phytoplankton community displayed significant nitrogen (N) limitation, while both phosphorus (P) and N were occasionally limiting in spring with some N+P co-limitation. Light was apparently limiting during fall and winter when the water was turid and nutrient-rich, as well as during other months of heavy rainfall and runoff. A polyhaline station in the lower estuary had clearer water and displayed significant responses to nutrient additions during all enrichment experiments. At this site N limitation occurred in summer and fall, and P limitation (with strong N+P co-limitation) occurred in winter and spring. The data suggest there are two patterns controlling phytoplankton productivity in the Cape Fear system: 1) a longitudinal pattern of decreasing light limitation and increasing nutrient sensitivity along the salinity gradient, and 2) a seasonal alternation of N limitation, light limitation, and P limitation in the middle-to-lower estuary. Statistical analyses indicated upper watershed precipitation events led to increased flow, turbidity, light attenuation, and nutrient loading, and decreased chlorophyll a and nutrient limitation potential in the estuary. Periods of low rainfall and river flow led to reduced estuarine turbidity, higher chlorophyll a, lower ambient nutrients, and more pronounced nutrient limitation.     

Refining habitat requirements of submersed aquatic vegetation: Role of optical models

A model of the spectral diffuse attenuation coefficient of downwelling irradiance was constructed for Chincoteague Bay, Maryland, and the Rhode River, Maryland. The model is written in terms of absorption spectra of dissolved yellow substance, the chlorophyll-specific absorption of phytoplankton, and absorption and scattering by particulate matter (expressed as turbidity). Based on published light requirements for submersed aquatic vegetation (SAV) in Chesapeake Bay, the model is used to calculate the range of water-quality conditions that permit survival of SAV at various depths. Because the model is spectrally based, it can be used to calculate the attenuation of either photosynthetically active radiation (PAR, equally weighted quanta from 400 nm to 700 nm) or photosyntheticallyusable radiation (PUR, the integral of the quantum spectrum weighted by the pigment absorption spectrum of SAV). PUR is a more accurate measurement of light that can be absorbed by SAV and it is more strongly affected by phytoplankton chlorophyll in the water column than is PAR. For estuaries in which light attenuation is dominated by turbidity and chlorophyll, the model delimits regions in which turbidity alone (chlorophyll <10 μg 1^?1), chlorophyll alone (turbidity <1 NTU) or both factors (chlorophyll >10 μg 1^?1, turbidity >1 NTU) must be reduced to improve survival depths for SAV.     

Light attenuation and submersed macrophyte distribution in the tidal Potomac River and estuary

Changing light availability may be responsible for the discontinuous distribution of submersed aquatic macrophytes in the freshwater tidal Potomac River. During the 1985–1986 growing seasons, light attenuation and chlorophylla and suspended particulate material concentrations were measured in an unvegetated reach (B) and in two adjacent vegetated reaches (A and C). Light attenuation in reach B (the lower, fresh to oligohaline tidal river) was greater than that in reach A (the recently revegetated, upper, freshwater tidal river) in both years. Reach B light attenuation was greater than that in reach C (the vegetated, oligohaline to mesohaline transition zone of the Potomac Estuary) in 1985 and similar to that in reach C in 1986. In reach B, 5% of total below-surface light penetrated only an average of 1.3 m in 1985 and 1.0m in 1986, compared with 1.9 m and 1.4 m in reach A in 1985 and 1986, respectively. Water column chlorophylla concentration controlled light availability in reaches A and B in 1985, whereas both chlorophylla and suspended particulate material concentrations were highly correlated with attenuation in both reaches in 1986. Reach C light attenuation was correlated with suspended particulate material in 1986. The relationship between attenuation coefficient and Secchi depth was K_PAR=1.38/Secchi depth. The spectral distribution of light at 1 m was shifted toward the red portion of the visible spectrum compared to surface light. Blue light was virtually absent at 1.0 m in reach B during July and August 1986. Tidal range is probably an important factor in determining light availability for submersed macrophyte propagule survival at the sediment-water interface in this shallow turbid system.     

Testing the predictive power of seagrass depth limit models

The power of equations predicting seagrass depth limit (Z_c) from light extinction (K _z) was tested on data on seagrass depth limits collected from the literature. The test data set comprised 424 reports of seagrass colonization depth and water transparency, including data for 10 seagrass species. This data set confirmed the strong negative relationship betweenZ _c andK _z. The regression equation in Duarte (1991) overestimated the realized seagrass colonization depths at colonization depths < 5 m, while there was no prediction bias above this threshold. These results indicated that seagrass colonizing turbid waters (K _z 0.27 m^-1) have higher apparent light requirements than those growing in clearer waters. The relationship between seagrass colonization depth and light attenuation shifts at a threshold of light attenuation of 0.27 m^-1, requiring separate equations to predictZ _c for seagrass growing in more turbid waters and clearer waters, and to set targets for seagrass restoration and conservation efforts.     

Relative effects of physical and biological processes on nutrient and phytoplankton dynamics in a shallow estuary after a storm event

The effects of advection, dispersion, and biological processes on nitrogen and phytoplankton dynamics after a storm event in December 2002 are investigated in an estuary located on the northern New South Wales coast, Australia. Salinity observations for 16 d after the storm are used to estimate hydrodynamic transports for a one-dimensional box model. A biological model with nitrogen limited phytoplankton growth, mussel grazing, and a phytoplankton mortality term is forced by the calculated transports. The model captured important aspects of the temporal and spatial dynamics of the bloom. A quantitative analysis of hydrodynamic and biological processes shows that increased phytoplankton biomass due to elevated nitrogen loads after the storm was not primarily regulated by advection or dispersion in spite of an increase in river flow from <1 to 928×10³ m³ d⁻¹. Of the dissolved nitrogen that entered the surface layer of the estuary in the 16 d following the storm event, the model estimated that 28% was lost through exchange with the ocean or bottom layers, while 15% was removed by the grazing of just one mussel species,Xenostrobus securis, on phytoplankton, and 50% was lost through other biological phytoplankton loss processes.X. securis grazing remained an important loss process even when the estimated biological parameters in the model were varied by factors of ± 2. The intertidal mangrove pneumatophore habitat ofX. securis allows filtering of the upper water column from the lateral boundaries when the water column is vertically stratified, exerting top-down control on phytoplankton biomass.     

The relative importance of chlorophyll and colored dissolved organic matter (CDOM) to the prediction of the diffuse attenuation coefficient in shallow estuaries

The availability of underwater light is a critical factor in the growth and abundance of primary producers in shallow embayments. The goal of this study was to examine the relative importance of factors influencing light availability in this type of water body. Many simulation models of aquatic ecosystems predict light attenuation from chlorophyll or phytoplankton stock. In the three southern New England sites studied here, no useful relationship was found to exist between chlorophyll and K_PAR (the diffuse attenuation coefficient of photosynthetically active radiation; Kirk 1994; Mobley 1994). In 40 of 53 cases, a regression of chlorophyll versus K_PAR was not statistically significant. Variation in K_PAR did demonstrate a correlation to salinity, implicating a freshwater source of light attenuating material. This was true even in a system with little freshwater inflow. Colored dissolved organic matter (CDOM) is one such terrestrial input that enters estuaries from their watersheds and can strongly influence the availability of light to aquatic primary producers. This study demonstrated that over 70% of the variability in the K_PAR coefficient can be attributed to CDOM in the shallow estuaries studied. This illustrates the need for improved model formulations that include CDOM in the prediction of light attenuation in shallow coastal systems. A new equation has been developed to predict K_PAR with CDOM.     

Reversal of eutrophication following sewage treatment upgrades in the New River Estuary, North Carolina

The New River Estuary consists of a series of broad shallow lagoons draining a catchment area of 1,436 km², located in Onslow County, North Carolina. During the 1980s and 1990s it was considered one of the most eutrophic estuaries in the southeastern United States and sustained dense phytoplankton blooms, bottom water anoxia and hypoxia, toxic outbreaks of the dinoflagellatePfiesteria, and fish kills. High nutrient loading, especially of phosphorus (P), from municipal and military sewage treatment plants was the principal cause leading to the eutrophic conditions. Nutrient addition bioassay experiments showed that additions of nitrogen (N) but not P consistently yielded significant increases in phytoplankton production relative to controls. During 1998 the City of Jacksonville and the U.S. Marine Corps Base at Camp Lejeune completely upgraded their sewage treatment systems and achieved large improvements in nutrient removal, reducing point source inputs of N and P to the estuary by approximately 57% and 71%, respectively. The sewage treatment plant upgrades led to significant estuarine decreases in ammonium, orthophosphate, chlorophylla, and turbidity concentrations, and subsequent increases in bottom water dissolved oxygen (DO) and light penetration. The large reduction in phytoplankton biomass led to a large reduction in labile phytoplankton carbon, likely an important source of biochemical oxygen demand in this estuary. The upper estuary stations experienced increases in average bottom water DO of 0.9 to 1.4 mg l⁻¹, representing an improvement in benthic habitat for shellfish and other organisms. The reductions in light attenuation and turbidity should also improve the habitat conditions for growth of submersed aquatic vegetation, an important habitat for fish and shellfish.     

Attenuation of photosynthetically available radiation (PAR) in Florida Bay: Potential for light limitation of primary producers

Light attenuation in marine ecosystems can limit primary production and determine the species composition and abundance of primary producers. In Florida Bay, the importance of understanding the present light environment has heightened as major upstream water management restoration projects have been proposed and some are already being implemented. We analyzed a 2-yr (2001–2003) data set of the light attenuation coefficient (K_t) and its principal components (water, chromophoric dissolved organic matter [CDOM], tripton, phytoplankton) obtained at 40 stations within Florida Bay, calibrated synoptic underway data to produce high spatial resolution maps, examined the potential for light limitation, and quantified the individual effect of each component upon light attenuation. Tripton was the dominant component controlling light attenuation throughout Florida Bay, whereas the contribution of chlorophylla and CDOM to K_t was much smaller in all regions of Florida Bay. It was possible to accurately estimate the light attenuation coefficient from component concentrations, using either a mechanistic or a statistical model with root mean square errors of 0.252 or 0.193 m⁻¹, respectively. Compared to other estuaries, Florida Bay had the lowest overall K_t and the greatest relative contribution from tripton. Comparing the recent data to a study of Florida Bay’s light environment conducted in 1993–1994, we found that overall water clarity in the Bay increased significantly, indicated by a nearly 3-fold decrease in K_v as a result of lower tripton concentrations, although the percent contribution of each of the components to K_t is unchanged. Only the northwest corner of Florida Bay, an area comprised of approximately 8% of the Bay’s total area, was found on average to have sufficient light attenuation to limit the growth of seagrasses. This is much less extensive than in 1993–1994, when seagrass growth was potentially limited by light at over 50% of the stations sampled.     

Rates of nitrification along an estuarine gradient in Narragansett Bay

Rates of pelagic nitrification, measured using N-Serve-sensitive [¹⁴C]bicarbonate uptake, varied by as much as an order-of-magnitude among three sites along the salinity gradient of Narragansett Bay (Rhode Island, United States). Rates were always higher at the Providence River estuary site (0.04–11.2 μmol N I^?1 d^?1) than at either the lower Narragansett Bay site (0.02–0.98 μmol N I^?1d^?1) or the freshwater Blackstone River site (0.04–1.7 μmol N I^?1d^?1). Although temperature was the most important variable regulating the annual cycle of nitrification, ammonium concentrations were most likely responsible for the large differences in rates among the three sites in summer. At the levels found in this estuarine system, salinity and concentrations of oxygen or total suspended matter did not appear to have a direct measurable effect on nitrification and pH did only occasionally. Nitrification played an important role in the nitrogen cycle at all three sites. In Narragansett Bay, nitrification contributed 55% of the NO₂ ^? and NO₃ ^? entering annually, and was the major source during spring and summer. Water from offshore was the only other large source of NO₂ ^? and NO₃ ^?, contributing 34%. High summer rates of nitrification could support much of the phytoplankton uptake of NO₂ ^? and NO₃ ^?. In the Providence River estuary, the largest annual input of NO₂ ^? and NO₃ ^? was from rivers (54%), although nitrification (28%) and water from lower portions of the bay (11%) also made large contributions. Again, nitrification was most important in the summer. The high rates of nitrification in the Providence River estuary during summer were also likely to be important in terms of oxygen demand, and the production of nitric and nitrous oxides. In the Blackstone River, NO₂ ^? and NO₃ ^? concentrations increased as the river flowed through Rhode Island, and nitrification was a possible source.     

A long-term record of photosynthetically available radiation (PAR) and total solar energy at 38.6°N, 78.2°W

Photosynthetically available radiation (PAR; 400–700 nm, E m⁻² d⁻¹) is the fraction of the total solar energy (Mjoules m⁻² d⁻¹) that is used by organisms for photosynthesis and vision. We present a statistical summary of a 17-yr time series of PAR data (1982–1998) collected near Chesapeake Bay as well as a second set of data on PAR and total solar energy gathered over a shorter time span (1997–1998). The time series data (5,126 daily totals) varied between 1–67 E m⁻² d⁻¹ and were used to estimate the minimum and maximum values of PAR as a function of day of the year. In monthly frequency distributions of the PAR data, three modes were observed corresponding to sunny, partly cloudy, and overcast days. The second set of PAR and total solar energy data were used to examine the ratio of PAR to total solar energy, which was 2.04 E Mjoule⁻¹ for PAR between 10 and 70 E m⁻² d⁻¹. On overcast days, the ratio increased to as high as 3 E Mjoule⁻¹ as PAR increased in importance as a fraction of the total solar energy. These values were consistent with others in the literature, and the relationships reported here can be used to predict the climatology of PAR and total solar energy within the Chesapeake region. The PAR data were also combined with reported minimum values of PAR for net primary production in the surface mixed layer of the water column of aquatic systems to estimate the combinations of mixed layer depth and diffuse attenuation coefficient (number of optical depths) under which light limitation of phytoplankton primary production is expected to occur.     

Horizontal sighting range and Secchi depth as estimators of underwater PAR attenuation in a coastal lagoon

Attenuation of photosynthetically available radiation (PAR) measured using a light meter, was related to Secchi disk, horizontal black disk and horizontal sighting ranges observed in a coastal lagoon of the Southern California Current System. Vertical attenuation coefficient (K_PAR) was calculated from radiometric PAR profiles. Vertical (Z_D) and horizontal (HS) sighting ranges were measured with white (Secchi depth or Z_SD, HS _W ) and black (Z _BD, HS _B ) targets. Empirical power models for the K_PAR-Z_SD (K_PAR=1.47 Z_SD ^−1.13), K_PAR-Z _BD (K_PAR=0.98 Z _BD ^−1.26), K_PAR-HS _W (K_PAR=1.22 HS _W ^−1.14) and K_PAR-HS _B (K_PAR=0.73 HS _B ^−1.07) relationships were developed. The parameters of these models may not apply to other water bodies because their values depend on the range of water reflectance in each case, as reported in the literature. This is the first contribution reporting K_PAR-HS empirical relations in an estuarine environment but their application may be limited to this coastal lagoon. While this approach may be universal, more data are needed to explore the variability of the parameters between different water bodies.     

Origins of Particulate Organic Matter Determined from Nitrogen Isotopic Composition and C/N Ratio in the Highly Eutrophic Danshuei Estuary,Northern Taiwan

The Danshuei River flows through the heavily populated metropolitan area of Taipei and New Taipei cities, which causes remarkable additions of nutrient elements. In spite of the rather short residence time of water, the Danshuei estuary is distinctive for the very high ammonium concentration and extensive hypoxia in its lower reach. Because particulate organic matter (POM) is potentially the culprit of hypoxia, we investigate the isotopic characteristics of POM collected in February and July 2009 at a fixed station over four semidiurnal tidal cycles. By using nitrogen isotopic composition and C/N ratio of POM, we derive the relative contributions of POM from different sources. One potential source that combines dead and living phytoplankton, phytodetritus, has δ¹⁵N values that can be predicted by the δ¹⁵N of ammonium and the isotope effect during ammonium uptake; however, the isotope effect is concentration dependent. We employ a three-end-member mixing model based on δ¹⁵N and C/N ratio to calculate the fractional contributions from three major POM sources, i.e., phytodetritus, soil, and sediment. Sensitivity test was conducted for the derivations from both carbon and nitrogen basis. For February 2009 we found the three fractions (in terms of contribution to the particulate organic carbon) to be 45 ± 19, 10 ± 11 and 45 ± 13 %, respectively; for July 2009, 71 ± 18, 11 ± 10 and 18 ± 13 %, respectively. The results imply that phytodetritus is probably the major culprit for the hypoxic conditions in the estuary, especially, in summer.