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1.
Several long‐term studies have monitored populations of algal symbionts, Symbiodinium sp., in coral hosts over different temporal and spatial scales, and among multiple host species. The extension of these studies to include environmental pools of algal symbionts from sources such as the water column, sediments, free‐floating mucus mats and those settling on biofilms has only been studied by a few, yet has the potential to enhance our understanding of the dynamics and controls on symbiont populations. Adaptive changes in the coral symbiont complement rely either on the uptake of new strains from the environment or population expansion of rarer strains in the existing symbiont population. The relative scope for these alternative pathways of uptake is unknown. This study therefore examined spatial changes in Symbiodinium clades within the water column at two different time periods and compared these with other environmental pools (biofilms, sediments, and mucus mats) and those within the dominant reef‐building species at the study site, Acropora muricata. A diversity of algal symbiont clades were detected in environmental pools, with specific clades associated with different habitats. At an island scale, there was significant variation in clade composition between sites separated by 0.5–7 km, a result which was repeated for both sample periods encompassing different seasons (March 2009 and August 2010). Although no single environmental pool contained a Symbiodinium complement comparable to that of the host coral species investigated, the dominant coral Symbiodinium were available in combinations of the environmental pools, indicating that the coral has the potential to obtain its symbionts from a variety of environmental sources.  相似文献   

2.
While ocean acidification is a global issue, the severity of ecosystem effects is likely to vary considerably at regional scales. The lack of understanding of how biogeographically separated populations will respond to acidification hampers our ability to predict the future of vital ecosystems. Cold‐water corals are important drivers of biodiversity in ocean basins across the world and are considered one of the most vulnerable ecosystems to ocean acidification. We tested the short‐term physiological response of the cold‐water coral Lophelia pertusa to three pH treatments (pH = 7.9, 7.75 and 7.6) for Gulf of Mexico (USA) and Tisler Reef (Norway) populations, and found that reductions in seawater pH elicited contrasting responses. Gulf of Mexico corals exhibited reductions in net calcification, respiration and prey capture rates with decreasing pH. In contrast, Tisler Reef corals showed only slight reductions in net calcification rates under decreased pH conditions while significantly elevating respiration and capture rates. These differences are likely the result of environmental differences (depth, pH, food supply) between the two regions, invoking the potential for local adaptation or acclimatization to alter their response to global change. However, it is also possible that variations in the methodology used in the experiments contributed to the observed differences. Regardless, these results provide insights into the resilience of L. pertusa to ocean acidification as well as the potential influence of regional differences on the viability of species in future oceans.  相似文献   

3.
Mitochondrial DNA (mtDNA) is a single, usually non‐recombining locus, and often uniparentally inherited. Therefore, its ability to reveal recent gene flow among populations is usually questioned. In this study, the genetic population structure of 16 populations of Tridacna crocea (n = 366) from the Indo‐Malay Archipelago (IMA) was examined with 10 microsatellite markers and compared to previous studies using mtDNA, in order to test if the revealed population structure was congruent between the two marker systems. The results showed that the genetic population structure revealed by the two marker systems was mostly congruent, with a high correlation between cytochrome c oxidase subunit I (COI) and microsatellites. The studied populations could be divided by both marker systems as follows: (i) Eastern Indian Ocean, (ii) Central IMA, and (iii) Western Pacific. Populations in the Central IMA showed high gene flow. However, populations in the Java Sea (Karimunjava, Pulau Seribu) were grouped into a separate cluster by mtDNA analysis, while this grouping was not detected by microsatellites. It was also noteworthy that there is obvious heterozygosity deficiency in most of the populations, which may be caused by null alleles, inbreeding or population expansion. Overall, these results indicate that the mitochondrial COI gene is applicable for population genetic analysis and precise recovery of connectivity patterns of giant clams. Therefore, the combination of mtDNA and nuclear DNA markers can lead to a more complete understanding of population genetics. Moreover, this study is expected to facilitate fully displaying the population genetic structure of giant clams combining with other researchers' results.  相似文献   

4.
The genus Symbiodinium plays an essential role in the resistance and survival of reef‐building corals during temperature anomalies. Coral colonies inhabiting the Persian Gulf (PG) experience extended periods of different stresses. Kish Island is located in the harsh environment of the Northern PG with previously reported bleaching episodes. Samples of six coral species from Northwestern Kish Island were analysed by internal transcribed spacer 2 of ribosomal DNA to identify in hospite Symbiodinium populations. The results showed that lineage D of Symbiodinium was the most prevalent clade among different coral colonies, while clade C was only detected in symbiosis with a single coral species. However, the detected Symbiodinium subclades belonged to two host generalists. The predominance of the stress tolerant Symbiodinium trenchii and subclade C3 could suggest an acclimatization strategy to cope with the hostile environment of the PG.  相似文献   

5.
The precious red coral Corallium rubrum (L., 1758) lives in the Mediterranean Sea and adjacent Eastern Atlantic Ocean on subtidal hard substrates. Corallium rubrum is a long‐lived gorgonian coral that has been commercially harvested since ancient times for its red axial calcitic skeleton and which, at present, is thought to be in decline because of overexploitation. The depth distribution of C. rubrum is known to range from c. 15 to 300 m. Recently, live red coral colonies have been observed in the Strait of Sicily at depths of c. 600–800 m. This record sheds new light on the ecology, biology, biogeography and dispersal mechanism of this species and calls for an evaluation of the genetic divergence occurring among highly fragmented populations. A genetic characterization of the deep‐sea red coral colonies has been done to investigate biological processes affecting dispersal and population resilience, as well as to define the level of isolation/differentiation between shallow‐ and deep‐water populations of the Mediterranean Sea. Deep‐water C. rubrum colonies were collected at two sites (south of Malta and off Linosa Island) during the cruise MARCOS of the R/V Urania. Collected colonies were genotyped using a set of molecular markers differing in their level of polymorphism. Microsatellites have been confirmed to be useful markers for individual genotyping of C. rubrum colonies. ITS‐1 and mtMSH sequences of deep‐water red coral colonies were found to be different from those found in shallow water colonies, suggesting the possible occurrence of genetic isolation among shallow‐ and deep‐water populations. These findings suggest that genetic diversity of red coral over its actual range of depth distribution is shaped by complex interactions among geological, historical, biological and ecological processes.  相似文献   

6.
There is currently much debate about the ecological advantages for reef corals of hosting multiple types of the symbiotic dinoflagellate Symbiodinium. Amongst these is their apparent capacity to tolerate higher than normal water temperatures. There is strong photokinetic evidence that the trait of heat‐tolerance in plants is accompanied by energetic tradeoffs but little such evidence yet exists for corals. We use rapid light curves (RLCs) to investigate the photokinetic basis for thermo‐tolerance in the reef coral Acropora millepora with symbionts of contrasting thermal tolerance for which there are measured differences in energetics. Our results show that under non‐stressful temperatures, corals with heat‐tolerant type D Symbiodinium had a 41% lower maximum relative electron transport rate (rETRmax) and lower light absorption efficiency (α) due to lower cell Chl a content compared with corals with heat‐sensitive type C2 symbionts. Our results provide support for a photokinetic link between heat tolerance and deficits in holobiont (coral + symbiont) growth, lipid stores and reproduction. Reduced electron transport rate and light absorption capacity may be genotype‐specific attributes that enable clade D symbionts and their cnidarian hosts to cope with temperature stress but they inherently influence the photosynthetic function of the symbionts and thus have negative downstream effects on the coral.  相似文献   

7.
Recent studies suggest a future increase in sponge bioerosion as an outcome of coral reef decline around the world. However, the factors that shape boring sponge assemblages in coral reefs are not currently well understood. This work presents the results of a 17‐month assessment of the presence and species richness of boring sponges in fragments collected from living corals, dead coral reef matrix and coral rubble from Punta de Mita and Isabel Island, two coral reefs from the central coast of the Mexican Pacific Ocean. Both localities have a high cover of dead corals generated by past El Niño Southern Oscillation events, but Punta de Mita was also highly exposed to anthropogenic impacts. Additionally, environmental factors (water transparency, water movement, temperature, sediment deposition, SST, and chlorophyll concentration) were assessed to test the hypothesis that environmental conditions which are potentially harmful for corals can enhance sponge bioerosion. Isabel Island and Punta de Mita showed a similar species richness (13 and 11 species, respectively) but boring sponge presence in both live and dead corals was higher at Isabel Island (57.6%) than at Punta de Mita (35.7%). The same result was obtained when each type of substrate was analysed separately: dead coral reef matrix (81.3% versus 55.5%), coral rubble (47.7% versus 20.0%) and living corals (43.7% versus 31.7%). A principal components analysis showed a higher environmental heterogeneity at Punta de Mita, as well as important environmental differences between Punta de Mita and Isabel Island, due to sediment deposition (2.0 versus 0.2 kg·m?2·d?1) and water movement (24.5% versus 20.5% plaster dissolution day?1), that were also negatively correlated with boring sponge presence (r = ?0.7). By analysing the boring sponge assemblage, we found that environmental settings, together with habitat availability (i.e., dead coral substrate) differentiated assemblage structure at both localities. Major structural differences were largely due to species such as Cliona vermifera, Cliona tropicalis and Aka cryptica. In conclusion, factors such as habitat availability favored the presence of boring sponges but some environmental factors such as abrasion resulting from moving sediment acted restrictively, and exerted a major role in structuring boring sponge assemblages in the Mexican Pacific.  相似文献   

8.
肉芝软珊瑚属(Sarcophyton)是珊瑚礁生态系统中常见的软珊瑚,具有极强的药用价值.我国肉芝软珊瑚种类资源十分丰富,但目前国内对此种珊瑚的分类研究处于停滞状态,肉芝软珊瑚外部形态差异较小,难以直接进行种类鉴定.本研究采集海南省三亚市西瑁岛、万宁市甘蔗岛和大洲岛珊瑚礁区的26个肉芝软珊瑚样品,根据骨针形态学初步鉴定,并分析线粒体msh1基因和COI基因序列进行种类鉴定.结果显示:所有采集的26个样品,鉴定为5个种,分别为:Sarcophyton cherbonnieri、Sarcophyton crassum、Sarcophyton trocheliophorum、Sarcophyton glaucum和Sarcophyton ehrenbergi.其中S. cherbonnieri和S. crassum为我国新纪录种.本研究为海南岛附近海域肉芝软珊瑚的鉴定提供参考,并为我国软珊瑚种类鉴定和生物多样性的研究提供基础数据.  相似文献   

9.
Sven Zea 《Marine Ecology》2011,32(2):162-173
The Caribbean sponge Cliona delitrix is among the strongest reef space competitors; it is able to overpower entire coral heads by undermining coral polyps. It has become abundant in reefs exposed to organic pollution, such as San Andrés Island, Colombia, SW Caribbean. Forty‐four sponge‐colonized coral colonies were followed‐up for 13 months to establish the circumstances and the speed at which this sponge advances laterally into live coral tissue and the coral tissue retreats. Cliona delitrix presence and abundance was recorded at seven stations to interpret current reef space and coral species colonization trends. The spread of C. delitrix on a coral colony was preceded by a band of dead coral a few millimeters to several centimeters wide. However, the sponge was directly responsible for coral death only when live coral tissue was within about 2 cm distance; coral death became sponge advance‐independent at greater distances, being indirectly dependent on other conditions that tend to accelerate its retreat. Cliona delitrix advanced fastest into recently killed clean coral calices; however, sponge spread slowed down when these became colonized by algae. The lateral advance of C. delitrix was slower than other Cliona spp. encrusting excavating sponges, probably owing to the greater depth of its excavation into the substratum. Cliona delitrix prefers elevated portions of massive corals, apparently settling on recently dead areas. It currently inhabits 6–9% of colonies in reefs bordering San Andrés. It was found more frequently in Siderastrea siderea (the most abundant local massive coral), which is apparently more susceptible to tissue mortality than other corals. Current massive coral mortality caused by C. delitrix could initially change the relative proportions of coral species and in the long‐term favor foliose and branching corals.  相似文献   

10.
Although underwater visual census (UVC) is the most frequently used technique for quantifying reef fish assemblages, remote video analysis has been gaining attention as a potential alternative. In the South Atlantic Ocean, Millepora spp. (class Hydrozoa) are the only branching coral species; however, little is known about the ecological role that they play for reef fish communities. We compared these two observation methods (remote video and UVC) to estimate reef fish abundance and species richness associated with colonies of the fire‐coral Millepora alcicornis at Tamandaré Reefs, Northeast Brazil. Additionally, the two different techniques were used to compare species behaviour in association with fire‐corals in order to examine the biases associated with each technique and provide useful information for behavioural ecologists studying fish–coral associations. There were no differences in reef fish abundance or species richness sampled by remote video or UVC. However, a significant difference in the behaviour of associated fish was recorded between the two methods. In the presence of a diver carrying out a UVC, fish were observed spending more time sheltered amongst the coral branches compared with passively swimming on coral colonies with the remote video technique. Specifically, on the remote video recordings agonistic interactions between fish and passive swimming accounted for 33.3% and 22.2% of the census time, respectively. By comparison, when observed by a diver fish spent 34.8% of their time sheltering amongst the coral branches. We demonstrate that both techniques are similarly effective for recording fish abundance and species richness associated with fire‐corals. However, differences were observed in the ability of each method to detect the behaviour of coral‐associated fishes. Our findings show that behavioural ecologists studying complex fish–coral associations need to ensure that their aims are clearly defined and that they choose the most appropriate technique for their study in order to minimize methodological biases.  相似文献   

11.
Decadal populations changes in four coral taxa and their patterns of association with algal symbionts (Symbiodinium spp. – 10 years of sampling) were examined on Kenyan back reefs over a period of climatic disturbances (1991?2009). Some of the better surviving taxa, Pavona and Pocillopora, were associated with variable temperature regimes and >50% of sampled colonies in these taxa had some of the more thermally tolerant Symbiodinium in clade D. In contrast, only around 35% of Acropora and no branching forms of Porites contained detectable levels of clade D, and both taxa experienced high levels of thermally‐induced mortality and poor recovery. Overall, however the relationship between Symbiodinium clade and population‐level success of coral hosts was not strong, and differential success inside and outside fisheries closures suggests that other factors, such as predation on corals, were also influential. Consequently, while Symbiodinium in clade D may contribute to the success of coral hosts across thermal disturbances, multiple ecological factors and additional biological traits also influence their long‐term survival.  相似文献   

12.
Several methods (Spectral Angle Mapper, first derivatives, spectral clustering) were used to test the possibility of discriminating live corals at the species level by using reflectance spectra obtained by close range underwater remote sensing. The Spectral Angle Mapper used with an in situ spectral library of 73 coral colonies recognised all corals correctly in an artificial remote sensing image created from the same coral spectra. The results did not change when “grey” noise was added to each pixel in the artificial image or when the artificial image was made from reflectance spectra modelled through a 5-m water column. The results showed that the within-species variability in optical properties of a set of four coral species, for which at least three different specimens were measured, was as high as between-species variability. Thus, it is highly unlikely that hard corals can be discriminated at a species level by means of remote sensing. Cluster analysis showed that it is difficult to recognise corals also at the genus level (Acropora vs. non-Acropora) based on their reflectance spectra. However, visual inspection of the coral spectra and clustering analysis suggest that it is possible to separate three main optical types of corals: green, blue, and brown corals. This may form the basis for an optical classification of corals that is more suited for remote sensing than traditional taxonomy.  相似文献   

13.
Populations of continuously distributed marine organisms that disperse via pelagic larvae are often assumed to exist in a state of genetic panmixia because of their potential ability for long‐distance dispersal. However, obligate symbionts may have more restricted gene flow due to recruitment limitations, making host specificity an important potential driver of biodiversity. To explore the tension between broad dispersal ability and limited recruitment potential, we used sequences of mtDNA cytochrome c oxidase subunit I (COI) to assess the fine‐scale phylogeography of the cleaner shrimp, Ancylomenes pedersoni, an obligate symbiont of sea anemones, along 300 km of the Florida Reef Tract (FRT). The results indicate high genetic diversity within A. pedersoni populations along the FRT. Pair‐wise ?ST values indicate significant genetic structuring between northern (Fort Lauderdale and Upper Keys) and southwestern (Lower Keys) populations, with significant isolation by distance. Two divergent COI haplotype lineages were detected through statistical parsimony analysis: one evenly distributed across the entire FRT (Clade 1) and one found primarily in two sample localities in the Lower Keys (Clade 2). Phylogenetic analyses using 16S‐rDNA indicates that this genetic diversity is of paraphyletic origin, and possibly the result of multiple colonization events. These results reveal a complex demographic and evolutionary history for A. pedersoni populations and provide the first evidence of highly divergent intra‐specific lineages independently colonizing the FRT. Because the FRT is a highly impacted coral reef system, understanding phylogeographic patterns along it has value beyond documentation of the factors that generate genetic diversity in tropical reef systems: these data are critical for creating scientifically based management strategies.  相似文献   

14.
Abstract. Tethya microstella, T. orphei, T. robusta, and T. seychellensis live in sympatry in a Maldivian coral reef lagoon (Gangehi Island, Ari Atoll). A morphological, morphometric, and electrophoretical study of these species show that their Maldivian populations are well separated morphologically and genetically. The genetic distances and the other data are more consistent with an immigration than with a local speciation hypothesis. Their coexistence may be explained by a differentiation in ecological requirements. The four species inhabit the shallow water biotope of the lagoon among the rubble of dead corals. Our data show that T. orphei and T. seychellensis occupy the upper rubble layer, T. microstella and T. robusta the lower one. This distinction agrees with the different morpho-functional features of the two pairs of species.  相似文献   

15.
The present investigation focuses on population genetic structure analysis of the endangered giant clam species Tridacna maxima across part of the Red Sea,with the main aim of assessing the influence of postulated potential barriers to gene flow(i.e.,particular oceanographic features and marked environmental heterogeneity)on genetic connectivity among populations of this poorly dispersive bivalve species.For this purpose,a total of 44 specimens of T.maxima were collected from five sampling locations along the Saudi Arabian coast and examined for genetic variability at the considerably variable mitochondrial gene cytochrome c oxidase I(COI).Our results revealed lack of population subdivision and phylogeographic structure across the surveyed geographic spectrum,suggesting that neither the short pelagic larval dispersal nor the various postulated barriers to gene flow in the Red Sea can trigger the onset of marked genetic differentiation in T.maxima.Furthermore,the discerned shallow COI haplotype genealogy(exhibiting high haplotype diversity and low nucleotide diversity),associated with recent demographic and spatial expansion events,can be considered as residual effect of a recent evolutionary history of the species in the Red Sea.  相似文献   

16.
细菌性疾病对珊瑚的健康影响造成了很大影响,而致病菌与珊瑚疾病之间的对应性还不明朗。色素异常现象是野外澄黄滨珊瑚一种常见的不健康状态。我们采用Illumina 16s rRNA基因高通量测序技术比较分析了健康和色素异常澄黄滨珊瑚共生细菌的群落组成差异。色素异常澄黄滨珊瑚共生细菌的多样性明显高于健康澄黄滨珊瑚,同时两种珊瑚的共生细菌群落组成也有很大差异。一些特定的细菌类群在澄黄滨珊瑚共生细菌中的比例很高,推测这些细菌种类可能是导致澄黄滨珊瑚色素异常的“罪魁祸首”。  相似文献   

17.
Marine organisms with a pelagic stage are often assumed to display minor population structure given their extended larval development and subsequent high long‐distance dispersal ability. Nonetheless, considerable population structure might still occur in species with high dispersal ability due to current oceanographic and/or historical processes. Specifically, for the wider Caribbean and Gulf of Mexico, theoretical and empirical considerations suggest that populations inhabiting each of the following areas should be genetically distinct: Panama, Belize, Southwest Florida (Tampa), and Southeast Florida (Fort Pierce). This study tests the hypothesis of significant genetic differentiation in Palaemon floridanus populations across the wider Caribbean and Gulf of Mexico. Population level comparisons were conducted using sequences of the mtDNA COI. In agreement with predictions, AMOVA and pairwise FST values demonstrated population differentiation among most pairs of the studied populations. Only Panama and East Florida populations were genetically similar. An isolation‐with‐migration population divergence model (implemented in IMA2) indicated that population divergence with incomplete lineage sorting can be invoked as the single mechanism explaining genetic dissimilarity between populations from the east and west coast of Florida. Historical demographic analyses indicated demographic expansion of P. floridanus in some localities [recent in Panama and ancient in East Florida and the wider Caribbean (entire dataset)] but constant population in other localities (in Belize and West Florida). This study rejects the idea of panmixia in marine species with high long‐distance dispersal ability. Contemporary and historical processes might interact in a complex manner to determine current phylogeographic patterns.  相似文献   

18.
Eastern Pacific reefs are mostly made up of interlocking coral branches of Pocillopora, which are easily broken by physical forces associated with heavy swells and winds. In this study we investigated the potential of these coral fragments to enable propagation of boring sponges. For this, we quantified the frequency of occurrence and diversity of boring sponges in fragments of corals recently trapped among the branches of live colonies, and later tested the hypothesis that these sponges colonize new branches of corals. Nearly 80% of the coral colonies investigated had coral fragments among their branches, and 69% of these coral fragments contained boring sponges (11 species), some of these sponges in reproduction (23% of them carried oocytes). To test whether sponges inhabiting coral fragments could colonize new branching corals we transplanted them to healthy branches, and to branches whose living tissue was mechanically eliminated to simulate damage produced by grazing and death after bleaching and other causes of coral tissue mortality. All the transplanted coral fragments cemented to each new colony by means of calcification, and of the three sponge species tested (Cliona vermifera, Cliona tropicalis and Thoosa mismalolli) only C. vermifera was able to colonize both new living branches (26.9%) and cleaned branches (65.5%). The apparent capability of C. vermifera to colonize by direct contact may be another key ability of this species to maintain high frequency of occurrence in Pacific coral reefs. However, although C. tropicalis and T. mismalolli were not able to colonize new coral substrata by direct contact, coral fragments have the potential to contribute to local persistence of these sponges and to their dispersal, both by asexual (fragments) and sexual means (transport of sexual products). The present findings may partly explain the current increase of excavating sponges on deteriorating reefs with a large availability of dead branching corals.  相似文献   

19.
The parrotfish Sparisoma viride often grazes live coral from edges undermined by the Caribbean encrusting and excavating sponge Cliona tenuis. To test whether parrotfish biting action has an effect on the dynamics of the sponge–coral interaction, we manipulated access of parrotfishes to the sponge–coral border in two species of massive corals. When parrotfish had access to the border, C. tenuis advanced significantly more slowly into the coral Siderastrea siderea than into the coral Diploria strigosa. When fish bites were prevented, sponge spread into S. siderea was further slowed down but remained the same for D. strigosa. Additionally, a thinner layer of the outer coral skeleton was removed by bioerosion when fish were excluded, a condition more pronounced in D. strigosa than in S. siderea. Thus, the speed of sponge‐spread and the extent of bioerosion by parrotfish was coral species‐dependent. It is hypothesized that coral skeleton architecture is the main variable associated with such dependency. Cliona tenuis spread is slow when undermining live S. siderea owing to the coral’s compact skeleton. The coral’s smooth and hard surface promotes a wide and shallow parrotfish bite morphology, which allows the sponge to overgrow the denuded area and thus advance slightly faster. On the less compact skeleton of the brain coral, D. strigosa, sponge spread is more rapid. This coral’s rather uneven surface sustains narrower and deeper parrotfish bites which do not facilitate the already fast sponge progress. Parrotfish corallivory thus acts synergistically with C. tenuis to further harm corals whose skeletal architecture slows sponge lateral spread. In addition, C. tenuis also appears to mediate the predator–prey fish–coral interaction by attracting parrotfish biting.  相似文献   

20.
The species of Ophiuroidea that commonly occur on coral reefs can be found on different substrates and associated with other organisms including algae, sponges, and corals. This study evaluated the temporal variability of the ophiuroid fauna associated with the alga Amphiroa fragilissima on the Ponta Verde coral reef on the coast of Maceió in Alagoas, Northeastern Brazil. Replicate samples of algal substrate were collected at low tide during in the dry and rainy seasons, over a 10‐year period, from 1998–2007. Eight species of Ophiuroidea were identified, with a total of 8736 individuals associated with A. fragilissima. The most dominant and frequent species of Ophiuroidea were Amphipholis squamata and Ophiactis savignyi; all other species were rare. Cluster analysis and nMDS detected four groups, with two groups each occurring only in summer or winter periods, as well as other groups occurring in both periods.  相似文献   

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