Spatial variability of the primary production and chlorophyll <Emphasis Type="Italic">a</Emphasis> concentration in the drake passage in the austral spring

The spatial distribution of the primary production (PP) and the chlorophyll a concentration (Chl) were investigated during two research cruises in the Drake Passage area in October–November of 2007 and 2008. The algorithm evaluating the integral PP (PP_int) for the water column in this area was developed based on the data on the surface chlorophyll (Chl_s) and the incident solar irradiance obtained in 2004–2008 in the Atlantic Sector of the Southern Ocean. The results obtained both by the experimental and model approaches suggested that the Polar Front (PF) region of the Drake Passage was characterized by low values of both the PP_int (<100 mg C/m² per day) and Chl_s (0.08–0.20 mg/m³) in October–November. Low values of the Chl_s and relatively high phaeophytine a concentrations indicated the winter succession state of the phytoplankton community in the Antarctic Ocean and the southern Polar Frontal Zone (PFZ). The seasonal warming of the surface water layers and the developing pycnocline resulted in a phytoplankton bloom and a Chl_s concentration of more than 1 mg/m³ in mid-November in this area and the Subantarctic waters.     

Phytoplankton production characteristics in the Eastern Atlantic and Atlantic sector of the Southern Ocean in October–November 2004

Production parameters of surface phytoplankton were measured along three transects: La Manche-Cape Town (I); Cape Town-54°S (II); 0°-49°W (along 54°S) (III). The Canary upwelling waters were most productive along transect I, where the surface chlorophyll a (Chl ₀) and the surface primary production (PP ₀) were as high as 4.3 mg/m³ and 173 mg C/m³ per day, respectively. Mosaic patterns in the distribution of these parameters were recorded in the northeastern regions of the South Subtropical Anticyclonic Gyre (Chl ₀ = 0.03–0.35 mg/m³; PP ₀ = 1.6–12.6 mg C/m³ per day). Along transect II, the average twofold southward increase in Chl ₀ (from 0.2 to 0.4 mg/m³) and the concurrent decline of the phytoplankton assimilation activity ( AN ₀) resulted in deviations from typical latitudinal changes inPP ₀. At most sites, PP ₀ values varied between 6 and 15 mg C/m³ per day. Negligible changes in Chl ₀ (0.36–0.85 mg/m³), PP ₀ (8–19 mg C/m³ per day), and AN ₀ (0.7–1.6 mg C/mg chl a per hour) were registered for the oceanic waters along transect III. Along all the transects, PP ₀ depended on Chl ₀ to a greater extent than AN ₀. The values of the latter parameter were largely determined by the water temperature and showed a slight correlation with the insolation. Along transect II, the integrated primary production (PP _int) and the layer-integrated chlorophyll a in the upper 200 m (Chl _0–200) generally varied from 180 to 360 mg C/m² per day and from 30 to 70 mg/m², respectively. In the Polar Front region, an increase in Chl _0–200, PP _int, Chl ₀, and PP ₀ up to respective values of 190 mg/m², 520 mg C/m² per day, 1.2 mg/m³, and 32 mg C/m³ per day was observed. A comparison of the water column (0–100 m) stability with the vertical distribution of the primary production and chlorophyll content along transect II implies that the thick (>100 m) upper mixed layer (UML) formed in response to the strong water cooling and wind forcing was largely responsible for the limited primary production in the Subantarctic and Antarctic regions. The large UML thickness resulted in an intense removal of plant cells from the photosynthetic layer and light starvation of a significant (up to 60%) part of the phytoplankton community.     

Saldanha Bay,South Africa II: estimating bay productivity

Saldanha Bay is a narrow-mouth bay on the west coast of South Africa linked to the southern Benguela upwelling system. Bay productivity was investigated by use of the conventional light-and-dark bottle oxygen method, and, for comparison, through assimilation of the stable isotope tracer ¹³C. Gross community production GCP and net community production NCP, as determined from the oxygen method, were respectively 2.6 and 2.4 times higher than estimates determined from the stable isotope method. Chlorophyll a (Chl a) concentrations increased with the onset of spring and well-defined subsurface maxima developed in association with increasingly stratified conditions (mean water column Chl a concentrations ranged from 5.4 to 31.5?mg m^?3 [mean 15.5?mg m^?3; SD 7.6]). A sharp decline in photosynthetic rates P* (GCP normalised to Chl a concentration) with depth was attributed to light limitation, as demonstrated by the high vertical attenuation coefficients for downward irradiance K_d, which varied from 0.29 to 0.70?m^?1 (mean 0.48?m^?1; SD 0.12). Productivity maxima were consequently near-surface despite the presence of deeper subsurface biomass maxima. The community compensation depth Z_cc, where gross community production balances respiratory carbon loss for the entire community, ranged from 2.9 to 9.2?m (mean 5.8?m; SD 2.2), and was typically shallower than the 1% light depth for PAR (photosynthetically available radiation), Z1%PAR, which is traditionally assumed to be the depth of the euphotic zone and which ranged from 6.6 to 15.9?m (mean 9?m; SD 2.6). Autotrophic communities, where organic matter is produced in excess of respiratory demand, were confined on average to the upper 5.8?m of the water column, and often excluded the bulk of the phytoplankton community, where light limitation is considered to lead to heterotrophic community metabolism. Estimates of integrated water column productivity ranged from 0.84 to 8.46?g C m–2 d^?1 (mean 3.35?g C m^?2 d^?1; SD 1.9).     

Seasonal dynamics and estimation of the annual primary production of phytoplankton in the Black Sea

Seasonal variations in the surface chlorophyll a concentrations (Chl _s) and the integrated primary production (PP _inf) were investigated for ten regions of the Black Sea based on long term observations (1973–1997). Two or three maximums of both Chl _s and PP _inf were registered in most of the shelf regions (SR, <200 m), the continental slope (CS, 200–1500 m), and the deep regions (DSR >1500 m) in February–March, June–August, and October–November. Such a pattern suggests that the seasonal dynamics of PP _inf strongly depend on the Chl _s variability. The mean annual values of the PP _inf comprised 130–420, 130–150, and 140–150 g C m^?2 in the SR, CS, and DSR, respectively. These values are mainly typical of the eutrophic layer and the transition between the eutrophic and mesotrophic waters (SR) or for the upper boundary of the mesotrophic waters (CS and DSR). The maximal contribution of the wintertime (December–March) to the total PP _inf values (40–42%) was observed in the DSR. In the SR and the adjacent eastern CS areas, the proportion of the PP _inf summertime production (June–September) reaches 40–60% and is higher than the wintertime production. The lowest values of PP _inf (9–17%) were produced in the spring and autumn periods. The total annual values of PP _inf in the Black Sea are close to 50–70 Mt C.     

Analysis of primary production in the Seto Inland Sea, Japan, using a simple ecosystem model

A simple model of lower trophic level ecosystem has been created to analyze possible environmental control of primary production in eight sub-areas of the Seto Inland Sea. The primary production rates observed by Hashimotoet al. (1997a) in these sub-areas are well reproduced by the model, including horizontal processes such as horizontal transport of nutrients and vertical processes such as vertical mixing, light intensity and sinking of particulate matter. Without taking account of horizontal processes the model also successfully reproduces the observed primary production rates in some areas, but if fails to reproduce those in the others. This shows that the relative importance of the horizontal transport on the primary production differs are by area. Two time scales,T _z andT _H, are introduced to explain this difference.T _z is a vertical cycling time of material, which is defined as the time during which the stock of the material in the water column is utilized for primary production;T _H is the horizontal transit time of the material. The relative importance of the horizontal process is well explained by theT _H/T _z ratio; that is, the horizontal transport process is important in the areas where this ratio is small. Further the possible mechanisms of nutrient supply for the primary production in each sub-area are investigated using this model.     

Effects of irradiance on benthic and water column processes in a Gulf of Mexico estuary: Pensacola Bay, Florida, USA

We examined the effect of light on water column and benthic fluxes in the Pensacola Bay estuary, a river-dominated system in the northeastern Gulf of Mexico. Measurements were made during the summers of 2003 and 2004 on 16 dates distributed along depth and salinity gradients. Dissolved oxygen fluxes were measured on replicate sediment and water column samples exposed to a gradient of photosynthetically active radiation. Sediment inorganic nutrient (NH₄⁺, NO₃⁻, PO₄³⁻) fluxes were measured. The response of dissolved oxygen fluxes to variation in light was fit to a photosynthesis–irradiance model and the parameter estimates were used to calculate daily integrated production in the water column and the benthos. The results suggest that shoal environments supported substantial benthic productivity, averaging 13.6 ± 4.7 mmol O₂ m⁻² d⁻¹, whereas channel environments supported low benthic productivity, averaging 0.5 ± 0.3 mmol O₂ m⁻² d⁻¹ (±SE). Estimates of baywide microphytobenthic productivity ranged from 8.1 to 16.5 mmol O₂ m⁻² d⁻¹, comprising about 16–32% of total system productivity. Benthic and water column dark respiration averaged 15.2 ± 3.2 and 33.6 ± 3.7 mmol O₂ m⁻² d⁻¹, respectively Inorganic nutrient fluxes were generally low compared to relevant estuarine literature values, and responded minimally to light exposure. Across all stations, nutrient fluxes from sediments to the water column averaged 1.11 ± 0.98 mmol m⁻² d⁻¹ for NH₄⁺, 0.58 ± 1.08 mmol m⁻² d⁻¹ for NO₃⁻, 0.01 ± 0.09 mmol m⁻² d⁻¹ for PO₄³⁻. The results of this study illustrate how light reaching the sediments is an important modulator of benthic nutrient and oxygen dynamics in shallow estuarine systems.     

Determination of experimentally enriched15N in nitrate nitrogen based on an improved method of azo dye formation

A method has been developed for determination of¹⁵N isotope ratio in nitrate nitrogen, which is a major analytical step in tracer experiments for studies of nitrate metabolism in the marine environment. The method is based on diazotization of nitrite with sulfanilic acid following reduction of nitrate to nitrite by a cadmium-copper column. The diazonium compound is then subject to the azo coupling reaction with 2-naphthol, and the azo dye formed is extracted by a solid phase extraction column. The dye eluted from the column is collected, and total nitrogen and¹⁵N content of the dye are determined by mass spectrometry. Sulfanilic acid can also remove preexisting nitrite by heating the sample under acidic conditions before passing through the cadmium-copper reduction column. The average recovery of nitrate nitrogen was 86%. A procedure for reducing the background nitrogen that derives from the analytical operations has been developed; background nitrogen was limited to about 0.25 μg-atomN. The variation in the background nitrogen levels reflects the range of error in¹⁵N determination of nitrate nitrogen by this method. Application of the present method to a¹⁵NO₃ ⁻ isotope dilution experiment for determination of nitrification rate in sea water is demonstrated.     

南海北部冬、夏季浮游群落呼吸率

Plankton respiration is an important part of the carbon cycle and significantly affects the balance of autotrophic assimilation and heterotrophic production in oceanic ecosystems. In the present study, respiration rates of the euphotic zone plankton community(CR_(eu)), size fractionated chlorophyll a concentration(Chl a), bacterial abundance(BAC), and dissolved oxygen concentration(DO) were investigated during winter and summer in the northern South China Sea(n SCS). The results show that there were obvious spatial and temporal variations in CR_(eu) in the n SCS(ranging from 0.03 to 1.10 μmol/(L·h)), CR_(eu) in winter((0.53±0.27) μmol/(L·h)) was two times higher than that in summer((0.26±0.20) μmol/(L·h)), and decreased gradually from the coastal zone to the open sea. The distribution of CR_(eu) was affected by coupled physical-chemical-biological processes, driven by monsoon events. The results also show that CR_(eu) was positively correlated with Chl a, BAC, and DO, and that BAC contributed the highest CR_(eu) variability. Furthermore, the results of the stepwise multiple linear regression suggest that bacteria and phytoplankton were the dominant factors in determining CR_(eu)(R~2 = 0.82, p0.05) in the n SCS. Based on this relationship, we estimated the integrated water column respiration rate(CRint) within 100 m of the investigated area, and found that the relationship between the biomass of the plankton community and respiration may be nonlinear in the water column.     

A test of the ADV-based Reynolds flux method for in situ estimation of sediment settling velocity in a muddy estuary

Under conditions common in muddy coastal and estuarine environments, acoustic Doppler velocimeters (ADVs) can serve to estimate sediment settling velocity (w _s) by assuming a balance between upward turbulent Reynolds flux and downward gravitational settling. Advantages of this method include simple instrument deployment, lack of flow disturbance, and relative insensitivity to biofouling and water column stratification. Although this method is being used with increasing frequency in coastal and estuarine environments, to date it has received little direct ground truthing. This study compared in situ estimates of w _s inferred by a 5-MHz ADV to independent in situ observations from a high-definition video settling column over the course of a flood tide in the bottom boundary layer of the York River estuary, Virginia, USA. The ADV-based measurements were found to agree with those of the settling column when the current speed at about 40 cm above the bed was greater than about 20 cm/s. This corresponded to periods when the estimated magnitude of the settling term in the suspended sediment continuity equation was four or more times larger than the time rate of change of concentration. For ADV observations restricted to these conditions, ADV-based estimates of w _s (mean 0.48±0.04 mm/s) were highly consistent with those observed by the settling column (mean 0.45±0.02 mm/s). However, the ADV-based method for estimating w _s was sensitive to the prescribed concentration of the non-settling washload, C _wash. In an objective operational definition, C _wash can be set equal to the lowest suspended solids concentration observed around slack water.     

On the sulphur chemistry of a super-anoxic fjord, Framvaren, South Norway

The concentrations of total carbonate (C_t), sulphate, sulphide, thiols and oxygen, the ratio between the stable sulphur isotopes ³⁴S and ³²S in sulphate and sulphide, and the density (used to calculate salinity) were determined on samples from the water column of Framvaren, a superanoxic fjord in southern Norway. From a depth of 18m (the oxic-anoxic boundary) the initial sulphate concentration, ([SO₄]_init), as calculated from salinity, is significantly higher than the sum of the measured sulphur species. This is attributed to a loss of sulphur from the water column. The amount of total carbonate produced, corrected for the initial concentration (C_t - 2.4 Sal/35) is found to be proportional to the amount of sulphate consumed, ([SO₄]_init - [SO₄]), according to the following relation C_t- 2.4 Sal/35 = 1.84 ([SO₄]_init - [SO₄]). Isotopic fractionation caused by bacterial sulphate reduction in the anoxic part of the water column produces sulphide with a δ³⁴S 40‰ lower than the δ³⁴S for sulphate at corresponding depths. The isotopic fractionation also results in δ³⁴S value for the remaining sulphate at depths below 80 m being considerably higher than the mean value for ocean water, which is close to + 20‰. The δ³⁴S values for sulphate at depths between 10 and 50 m were lower than + 20‰ which indicates oxidation of sulphide, which follows upon diffusion of sulphide from deeper parts of the water column and inflow of oxygenated seawater over the sill into the anoxic water of the fjord. A conclusive scenario of the Framvaren sulphur chemistry is presented.     

Carbon dioxide stored and acidified low oxygen bottom waters in coastal seas,Japan

Recently carbon dioxide fluxes between sea water and air have been measured in many coastal seas to clarify whether the coastal seas are source or sink of CO₂. In this study behavior of CO₂ within the water column was studied in a semi-enclosed coastal sea: the Seto Inland Sea, Japan. It was found that seasonal formation of hypoxic water mass is highly related to CO₂ dynamics in coastal seas. Bacterial remineralization of organic matter consumes dissolved oxygen (DO) and releases dissolved CO₂ in the bottom water when summertime thermal stratification develops. The CO₂ accumulates within the low DO bottom water (hypoxic water) and causes increasing of carbonic acid content which results in low pH. Concentrations of dissolved CO₂ and pH are highly correlated with DO concentration. The summertime low DO and acidification (low pH) occur in the lower layer every year. The accumulated CO₂ during the summer season is dispersed to the atmosphere at the beginning of mixing season.     

Observation of bottom water renewal and export production in the japan basin, east sea using tritium and helium isotopes

Tritium (₃H or T) has been produced mostly by atmospheric nuclear weapon tests, and entered the ocean in the form of water (HTO). As tritium exists as water itself, it has been regarded as an ideal tool to study the transport of water masses. In April 2001 we collected water samples in the western Japan Basin (WJB) for tritium and helium measurement. The timely sampling provided direct evidence of the bottom water formation, resulting in the drastic increase in tritium concentration from 0.3 TU in 2000 to 0.67 TU in 2001. Considering that the new bottom waters were found mostly in the WJB, it implies that maximum 1% of the whole bottom layer below 2600 m should be replaced with the surface water during the severely cold winter 2000—2001.₃H-₃He age, showing the elapsed time since the water left from the surface, can be used to calculate oxygen utilization rate by dividing AOU by the age. Under the condition of 90% oxygen saturation in the surface water, the integration of OUR in the water column below 200 m yields net oxygen consumption of 12 mol (O₂) m^-2 yr^-1, which corresponds to the export production of 99 g C m^-2 yr^-1 . This estimate is comparable to a previous estimate based on satellite data and implies that the ratio of export to primary production (f -ratio) is as high as 0.5 in the WJB.     

Cycling of dissolved and particulate nitrogen and carbon in the Framvaren Fjord, Norway: stable isotopic variations

The reaction pathways of nitrogen and carbon in the Framvaren Fjord (Norway) were studied through stable isotope analysis (δ¹⁵N and δ¹³C) of dissolved inorganic and particulate organic matter (POM). The variations in the isotopic compositions of the various C and N pools within the water column were use to evaluate the historical deposition of material to the sediments. The high δ¹⁵N-NH₄⁺ at the O₂/H₂S interface, as a consequence of microbial uptake between 19 and 25 m, results in extremely depleted δ¹⁵N-particulate nitrogen (PN) of approximately 1‰ within the particulate maximum at approximately 19 m. The carbon isotopic distribution of dissolved inorganic carbon (DIC) and particulate organic carbon (POC) within the interface suggests that the distinct microbial flora (Chromatium sp. and Chlorobium sp.) fractionate inorganic carbon to different degrees. The extremely light δ¹³C-POC within the interface (−31‰) appears to be a result of carbon uptake by Chromatium sp. while δ¹³C-POC of −12‰ is more indicative of Chlorobium sp. Nitrogen isotopic mass balance calculations suggested that approximately 75% of the material sinking to the sediments was derived from the dense particulate maximum between 19 and 25 m. The sediment distribution of nitrogen isotopes varied from 2‰ at the surface to approximately 6‰ at 30 cm. The nitrogen isotopic variations with depth may be an indicator of the depth or position of the O₂/H₂S interface in the fjord. Low sediment δ¹⁵N indicated that the interface was within the photic zone of the water column, while more enriched values suggested that the interface was lower in the water column potentially allowing for less fractionation during biological incorporation of dissolved inorganic nitrogen. Results indicate that the dense layers of photo-autotrophic bacteria in the upper water column impart unique carbon and nitrogen isotopic signals that help follow processes within the water column and deposition to the sediments.     

Dissolution of carbonate minerals in a subtropical shallow marine environment

Carbonate saturation state with respect to calcite and three different biogenic magnesian calcites has been determined by a modified saturometry technique. Measurements were made in the water column of Devil's Hole, a 25 m-deep basin in the Harrington Sound (Bermuda), which exhibits oxygen depletion in subthermocline waters during summer. Supersaturation in the entire water column was attained with respect to marble calcite. The biogenic carbonates analyzed became undersaturated below the thermocline within a narrow depth range, soon after P_CO2 exceeded 600 ppm. It is concluded that high magnesian calcites can be attacked during a significant portion of the year in these waters. Possible implications for the global CO₂ cycle are discussed.     

Phytoplankton,sediment and optical observations in Netherlands coastal water in spring

Factors controlling the dynamics of suspended particulate matter (SPM), its influence on sea-leaving radiance and in-water optical properties, and the consequences of optical variation for phytoplankton growth, were studied at the ‘Processes of Vertical Exchange in Shelf Seas’ (PROVESS) project's southern North Sea site during April 1999. The optical properties of Netherlands coastal water were not unexpectedly found to be primarily determined by suspended sediment (Case 2) and were classified as Jerlov type 7 ‘relatively turbid coastal water’. During the study period, vertical mixing periodically resuspended optically active particles from the bed fluff layer throughout the water column and into the near-surface layer. These particles influenced sea surface radiance reflectance, and the red/green ratio of radiance reflectance, both of which can be observed by remote sensing. Linear relationships between sea surface radiance reflectance and SPM concentration were primarily determined by the inorganic fraction, as organic SPM varied little in concentration throughout the cruise period. The inorganic fraction was an important scatterer of light at all wavelengths, whereas the organic fraction displayed a greater tendency for light absorption at shorter wavelengths. Although the euphotic layer (depth of 1% surface irradiance) was only 8–10 m deep, vertical mixing ensured that phytoplankton throughout the water column (∼18 m) had access to PAR in excess of the estimated compensation illumination.Growth rates of microplankton (which includes pelagic microheterotrophs as well as phytoplankters) were calculated using an algorithm from the PROWQM model. These ranged from 0.1 to 0.3 d⁻¹, and implied loss rates of 3–25% which were mostly attributed to mesozooplankton grazing. Estimated oxygen production, however, was in near equilibrium with oxygen demand observed in dark bottles, and implied a significant oxygen demand due to detrital respiration and nitrification. This was estimated as 3–6 mmol O₂ m⁻³ d⁻¹.In an order of magnitude timescale analysis, vertical mixing was found to be the single most important factor controlling the dynamics of SPM under mixed or stratified conditions. For a mixed water column microplankton aggregation and fluff layer resuspension also had the potential to redistribute material in the water column several times per day, whilst under stratified conditions horizontal exchange and inorganic particle sinking were more important. Resuspended material in a stratified water column remained below the pycnocline and had little impact on the near-surface layer optics. Other factors varied in importance with the level of stratification, which was recognised as a significant factor in determining the dynamics of SPM in this region of freshwater influence (ROFI).     

Estuarine nitrification: A naturally occurring fluidized bed reaction?

The rates of nitrification in the water column of the Tamar river estuary, southwest England have been measured using the incorporation of H¹⁴CO₃ in samples with and without the inhibitor of nitrification, 2-chloro-6-(trichloromethyl) pyridine (N-Serve). N-Serve proved successful in totally inhibiting NH₄-oxidizing bacteria but the activity of NO₂-oxidizing bacteria was inhibited by only 30%; other organisms were only slightly affected. Measurements of the nitrification rate made over the entire salinity range of the estuary (0–30‰) showed that maximum nitrification always coincided with the turbidity maximum. The field data suggest that the organisms responsible for nitrification were associated with periodically resuspended particulate material and that the turbidity maximum acts in a manner similar to a fluidized bed reactor. A dispersion model has been used to demonstrate that nitrification in the water column can account for 100% of the NO₂ maximum which is apparent down estuary from the turbidity maximum.     

Methane in the southern North Sea: Sources, spatial distribution and budgets

Measurements of methane (CH₄) so far have always shown supersaturation in the entire North Sea relative to the atmospheric partial pressure and the distribution of surface CH₄ reveals a distinct increase towards the shore. Since North Sea sediments presumably are an insignificant source for CH₄ the coastal contribution via rivers and tidal flats gains in importance.In this work, CH₄ data from the River Weser, the back barrier tidal flats of Spiekeroog Island (NW Germany), and the German Bight are presented. Results from the River Weser are compared to other rivers draining into the German Bight. Measurements in the tidal flat area of Spiekeroog Island highlight this ecosystem as an additional contributor to the overall CH₄ budget of the southern North Sea. A tidally driven CH₄ pattern is observed for the water column with maximum values during low tide. Tidal flat sediments turn out to be the dominating source because pore waters discharged during low tide are highly enriched in CH₄. In contrast, the freshwater contribution to the tidal flats by small coastal tributaries has almost no impact on water column CH₄ concentrations. The CH₄ level seems to be disturbed irregularly by wind forcing due to elevated degassing and prevention of advective flow when tidal flats remain covered by water.Based on our data, two model calculations were used to estimate the impact of tidal flats on the CH₄ budget in the German Bight. Our results demonstrate that the back barrier tidal flats of the east Frisian Wadden Sea contribute CH₄ in an order of magnitude between the Wash estuary and River Elbe and thus have to be considered in budget calculations.     

A comparative study of microalgal production in a marine versus a river-dominated temporarily open/closed estuary, South Africa

Temporarily open/closed estuaries (TOCEs) account for almost 71% of the total number of South African estuarine systems. To date the dynamics of microalgal production and biomass in TOCEs is poorly understood. A survey was therefore conducted in two TOCEs along the KwaZulu-Natal coast: the river-dominated Mdloti and the marine-dominated Mpenjati. The aims of this investigation were: (1) to compare the variability of benthic and pelagic microalgal production and biomass in these two contrasting systems; (2) to determine the key environmental parameters influencing primary production in these TOCEs. Results show a similar pattern of primary production and biomass in both estuaries. High benthic microalgal biomass with low primary production and low phytoplankton biomass with high rates of pelagic primary production were observed in both estuaries. Possible explanations for this include: (a) optimum light conditions in the water column, compared to the sediment surface; (b) high impact of grazing by zooplankton in the water column; and (c) settling of phytoplankton. Significant correlations were observed between primary production and environmental parameters (K_d, PAR, temperature, DIN and DIP), during the open and closed phases of both estuaries. A BIOENV (PRIMER) analysis showed that patterns of primary production in both estuaries were influenced primarily by interactions of multiple independent parameters. Comparisons between measured hourly pelagic primary production rates at the Mpenjati and Mdloti and the composite parameter (P_c) of Cole and Cloern (1987) revealed highly significant relationships (r² = 0.8; p < 0.001) between these differently derived variables.