Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro River estuary (Portugal)

In this study rates of oxygen, ammonium (NH₄ ⁺), nitrate (NO₃ ⁻), nitrite (NO₂ ⁻), and nitrous oxide (N₂O) fluxes, nitrogen (N) fixation, nitrification, and denitrification were compared between two intertidal sites for which there is an abundant global literature, muddy and sandy sediments, and two sites representing the rocky intertidal zone where biogeochemical processes have scarcely been investigated. In almost all sites oxygen production rates greatly exceeded oxygen consumption rates. During daylight, NH₄ ⁺ and NO₃ ⁻ uptake rates together with ammonification could supply the different N requirements of the primary producer communities at all four sites; N assimilation by benthic or epilithic primary producers was the major process of dissolved inorganic nitrogen (DIN) removal; N fixation, nitrification, and denitrification were minor processes in the overall light DIN cycle. At night, distinct DIN cycling processes took place in the four environments, denitrification rates ranged from 9 ± 2 to 360 ± 30 μmol N₂ m⁻² h⁻¹, accounting for 10–48% of the water column NO₃ ⁻ uptake; nitrification rates varied from 0 to 1712 ± 666 μmol NH₄ ⁺ m⁻² h⁻¹. A conceptual model of N cycle dynamics showed major differences between intertidal sediment and rocky sites in terms of the mean rates of DIN net fluxes and the processes involved, with rocky biofilm showing generally higher fluxes. Of particular significance, the intertidal rocky biofilms released 10 times the amount of N₂O produced in intertidal sediments (up to 17 ± 6 μmol N₂O m⁻² h⁻¹), representing the highest N₂O release rates ever recorded for marine systems. The biogeochemical contributions of intertidal rocky substrata to estuarine and coastal processes warrant future detailed investigation.     

The Effects of Salinity on Nitrogen Losses from an Oligohaline Estuarine Sediment

Benthic respiration, sediment–water nutrient fluxes, denitrification and dissimilatory nitrate reduction to ammonium (DNRA) were measured in the upper section of the Parker River Estuary from 1993 to 2006. This site experiences large changes in salinity over both short and long time scales. Sediment respiration ranged from 6 to 52 mmol m⁻² day⁻¹ and was largely controlled by temperature. Nutrient fluxes were dominated by ammonium fluxes, which ranged from a small uptake of −0.3 to an efflux of over 8.2 mmol N m⁻² day⁻¹. Ammonium fluxes were most highly correlated with salinity and laboratory experiments demonstrated that ammonium fluxes increased when salinity increased. The seasonal pattern of DNRA closely followed salinity. DNRA rates were extremely low in March, less than 0.1 mmol m⁻² day⁻¹, but increased to 2.0 mmol m⁻² day⁻¹ in August. In contrast, denitrification rates were inversely related to salinity, ranging from 1 mmol m⁻² day⁻¹ during the spring and fall to less than 0.2 mmol m⁻² day⁻¹ in late summer. Salinity appears to exert a major control on the nitrogen cycle at this site, and partially decouples sediment ammonium fluxes from organic matter decomposition.     

Benthic metabolism and nutrient cycling along an estuarine salinity gradient

Benthic metabolism and nutrient exchange across the sediment-water interface were examined over an annual cycle at four sites along a freshwater to marine transect in the Parker River-Plum Island Sound estuary in northeastern Massachusetts, U.S. Sediment organic carbon content was highest at the freshwater site (10.3%) and decreased along the salinity gradient to 0.2% in the sandy sediments at the marine end of the estuary. C:N ratios were highest in the mid estuary (23:1) and lowest near the sea (11:1). Chlorophyll a in the surface sediments was high along the entire length of the estuary (39–57 mg chlorophyll a m⁻²) but especially so in the sandy marine sediments (172 mg chlorophyll a m⁻²). Chlorophyll a to phaeophytin ratios suggested most chlorophyll is detrital, except at the sandy marine site. Porewater sulfide values varied seasonally and between sites, reflecting both changes in sulfate availability as overlying water salinity changed and sediment metabolism. Patterns of sediment redox potential followed those of sulfide. Porewater profiles of inorganic N and P reflected strong seasonal patterns in remineralization, accumulation, and release. Highest porewater NH₄ ⁺ values were found in upper and mid estuarine sediments, occasionally exceeding 1 mM N. Porewater nitrate was frequently absent, except in the sandy marine sediments where concentrations of 8 μM were often observed. Annual average respiration was lowest at the marine site (13 mmol O₂ m⁻² d⁻¹ and 21 mmol TCO₂ m⁻² d⁻¹) and highest in the mid estuary (130 mmol O₂ m⁻² d⁻¹ and 170 mmol TCO₂ m⁻² d⁻¹) where clam densities were also high. N₂O and CH₄ fluxes were low at all stations throughout the year: Over the course, of a year, sediments varied from being sources to sinks of dissolved organic C and N, with the overall spatial pattern related closely to sediment organic content. There was little correlation between PO₄ ³⁻ flux and metabolism, which we attribute to geochemical processes. At the two sites having the lowest salinities, PO₄ ³⁻ flux was directed into the sediments. On average, between 22% and 32% of total system metabolism was attributable to the benthos. The mid estuary site was an exception, as benthic metabolism accounted for 95% of the total, which is attributable to high densities of filter-feeding clams. Benthic remineralization supplied from less than 1% to over 190% of the N requirements and 0% to 21% of the P requirements of primary producers in this system. Estimates of denitrification calculated from stoichiometry of C and N fluxes ranged from 0% for the upper and mid estuary site to 35% for the freshwater site to 100% of sediment organic N remineralization at the marine site. We hypothesize that low values in the upper and mid estuary are attributable to enhanced NH₄ ⁺ fluxes during summer due to desorption of exchangeable ammonium from rising porewater salinity. NH₄ ⁺ desorption during summer may be a mechanism that maintains high rates of pelagic primary production at a time of low inorganic N inputs from the watershed.     

Denitrification and the stoichiometry of nutrient regeneration in Waquoit Bay, Massachusetts

To determine the removal of regenerated nitrogen by estuarine sediments, we compared sediment N₂ fluxes to the stoichiometry of nutrient and O₂ fluxes in cores collected in the Childs River, Cape Cod, Massachusetts. The difference between the annual PO₄ ³⁻ (0.2 mol P m⁻² yr⁻¹) and NH₄ ⁺ (1.6 mol N m⁻² yr⁻¹) flux and the Redfield N∶P ratio of 16 suggested an annual deficit of 1.5 mol N m⁻² yr⁻¹. Denitrification predicted from O₂∶NH₄ ⁺ flux ratios and measured as N₂ flux suggested a nitrogen sink of roughly the same magnitude (1.4 mol N m⁻² yr⁻¹). Denitrification accounted for low N∶P ratios of benthic flux and removed 32–37% of nitrogen inputs entering the relatively highly nutrient loaded Childs River, despite a relatively brief residence time for freshwater in this system. Uptake of bottom water nitrate could only supply a fraction of the observed N₂ flux. Removal of regenerated nitrogen by denitrification in this system appears to vary seasonally. Denitrification efficiency was inversely correlated with oxygen and ammonium flux and was lowest in summer. We investigated the effect of organic matter on denitrification by simulating phytoplankton deposition to cores incubated in the lab and by deploying chambers on bare and macroaglae covered sediments in the field. Organic matter addition to sediments increased N₂ flux and did not alter denitrification efficiency. Increased N₂ flux co-varied with O₂ and NH₄ ⁺ fluxes. N₂ flux (261±60 μmol m⁻² h⁻¹) was lower in chambers deployed on macroalgal beds than deployed on bare sediments (458±70 μmol m⁻² h⁻¹), and O₂ uptake rate was higher in chambers deployed on macroalgal beds (14.6±2.2 mmol m⁻² h⁻¹) than on bare sediments (9.6±1.5 mmol m⁻² h⁻¹). Macroalgal cover, which can retain nitrogen in the system, is a link between nutrient loading and denitrification. Decreased denitrification due to increasing macroalgal cover could create a positive feedback because decreasing denitrification would increase nitrogen availability and could increase macroalgae cover.     

Observations and simulations of water-sediment heat exchange in a shallow coastal lagoon

Water and sediment temperatures from Florida's Indian River Lagoon are used to investigate water-sediment heat energy exchanges and the resulting sub-bottom temperature fluctuations in a shallow-water estuarine environment. A 132-day study documents the response to cold-air outbreaks and spring warming. A one-dimensional, 120-layer numerical model simulates temperatures in the top 24 m of the sediment in response to observed water temperatures. Model simulations supplement sediment temperatures measured 50 and 95 cm below the water-sediment interface approximately weekly. Simulated water-sediment heat fluxes are generally between +0.075 (into the sediment) and −0.050 cal cm⁻² min⁻¹. The average simulated water-sediment heat flux is +0.003 cal cm⁻² min⁻¹. Over the course of an average day, heat entering the sediment reaches a maximum rate of 0.037 cal cm⁻² min⁻¹ at 1700, and fluxes out of the sediments reach −0.021 cal cm⁻² min⁻¹ at 0700. The standard deviations of sediment temperatures simulated for the 0–20, 80–100, and 180–200 cm layers are 85%, 41%, and 14%, respectively, of the standard deviation of the water temperature.     

The effects of multiple stressors on the balance between autotrophic and heterotrophic processes in an estuarine system

Responses of autotrophic and heterotrophic processes to nutrients and trace elements were examined in a series of experimental estuarine food webs of increasing trophic complexity using twenty 1-m³ mesocosms. Nutrients (nitrogen and phosphorus) and trace elements (a mix of arsenic, copper, cadmium) were added alone and in combination during four experimental runs spanning from spring 1997 to spring 1998. Diel changes in dissolved oxygen were used to examine whole system gross primary production (WS-GPP), respiration (WS-RESP), and net ecosystem metabolism (NEM). Nutrient and trace element additions had the greatest effect on WS-GPP, WS-RESP, and NEM; trophic complexity did not significantly affect any of these parameters (p>0.3). Effects of trophic complexity were detected in nutrient tanks where bivalves significantly (p=0.03) reduced WS-GPP. Nutrient additions significantly enhanced WS-GPP and to a lesser extent WS-RESP during most mesocosm runs. The system shifted from net heterotrophy (−17.2±1.8 mmol C m⁻³ d⁻¹) in the controls to net autotrophy (29.1±7.6 mmol C m⁻³ d⁻¹) in the nutrient tanks. The addition of trace elements alone did not affect WS-GPP and WS-RESP to the same extent as nutrients, and their effects were more variable. Additions of trace elements alone consistently made the system more net heterotrophic (−24.9±1.4 mmol C m⁻³ d⁻¹) than the controls. When trace elements were added in combination with nutrients, the nutrient-enriched system became less autotrophic (1.6±3.1 mmol C m⁻³ d⁻¹). The effects of trace elements on NEM occurred primarily through reductions in WS-GPP rather than increases in WS-RESP. Our results suggest that autotrophic and heterotrophic processes respond differently to these stressors.     

Variability in inorganic and organic nitrogen uptake associated with riverine nutrient input in the Gulf of Riga, Baltic Sea

Concentrations and rates of uptake of dissolved organic nitrogen (DON, free amino acids, and urea) and inorganic nitrogen (DIN, nitrate, and ammonium) were measured along two transects in the Gulf of Riga, a sub-basin of the Baltic Sea, during May and July 1996. Concentrations of total dissolved nitrogen (TDN) were 23±3 μg-at N 1⁻¹ in the northern region (mouth) and 41±5 μg-at N 1⁻¹ in the southern region (head) of the Gulf. Rates of nitrogen uptake, determined with¹⁵N-labeled substrates, reflected differences in TDN concentration between the regions. In May, uptake of DIN+DON measured 0.17 and 0.43 μg-at N 1⁻¹ h⁻¹ in the northern and southern parts of the Gulf, respectively. In July, DIN+DON uptake measured 0.38 and 0.68 μg-at N 1⁻¹ h⁻¹ in the north and south, respectively. Most of the variability in total nitrogen flux between the northern and southern regions was due to heterogeneity of DON utilization. Uptake of urea and dissolved free amino acid were up to 6 and 3 times greater in the south compared to the north. As evidenced by size-fractionation, plankton size structure appeared to play a role in the uptake of DON. The community in the southern part was largely composed of cells <5 μm, while up to 67% of the community in the northern part was composed of cells >5 μm. Our results indicate that DON was a major source of nitrogen to phytoplankton, particularly in the southern part of the Gulf.     

Benthic Oxygen Consumption and Organic Matter Turnover in Organic-poor, Permeable Shelf Sands

The high permeability of sediments and strong near-bottom currents cause seawater to infiltrate the surface layers of Middle Atlantic Bight shelf deposits. In this study, sandy sediment cores from 11 to 12 m water depth were percolated with filtered seawater on shipboard. Sedimentary oxygen consumption (SOC) increased non-linearly with pore water flow, approaching maximum rates of 120 mmol m⁻² d⁻¹ (May 2001) or 75 mmol m⁻² d⁻¹(July 2001). The addition of acetate to the inflowing water promptly enhanced the release of dissolved inorganic carbon (DIC) from the cores. DIC production rates were a linear function of acetate concentration, ranging from 100 to 300 mmol m⁻² d⁻¹ without substrate addition to 572 mmol m⁻² d⁻¹ with 100 mM acetate. The sediments also hydrolyzed a glucose pseudopolymer, and the liberated glucose prompted an increase of SOC. Our results suggest that decomposition rates of organic matter in permeable sands can exceed those of fine-grained, organic-rich deposits, when water currents cause advective interstitial flow, supplying the subsurface microbial community with degradable material and electron acceptors. We conclude that the highly permeable sand beds of the Middle Atlantic Bight are responsive within minutes to hours and efficiently operate as biocatalytical filters.     

Denitrification pathways and rates in the sandy sediments of the Georgia continental shelf,USA

Denitrification in continental shelf sediments has been estimated to be a significant sink of oceanic fixed nitrogen (N). The significance and mechanisms of denitrification in organic-poor sands, which comprise 70% of continental shelf sediments, are not well known. Core incubations and isotope tracer techniques were employed to determine processes and rates of denitrification in the coarse-grained, sandy sediments of the Georgia continental shelf. In these sediments, heterotrophic denitrification was the dominant process for fixed N removal. Processes such as coupled nitrification-denitrification, anammox (anaerobic ammonium oxidation), and oxygen-limited autotrophic nitrification-denitrification were not evident over the 24 and 48 h time scale of the incubation experiments. Heterotrophic denitrification processes produce 22.8–34.1 μmole N m^-2 d^-1 of N₂ in these coarse-grained sediments. These denitrification rates are approximately two orders of magnitude lower than rates determined in fine-grained shelf sediments. These lower rates may help reconcile unbalanced marine N budgets which calculate global N losses exceeding N inputs.     

Benthic biogeochemistry beneath the Mississippi River plume

Biogeochemical processes occurring near the sediment-water interface of shallow (≈20 m) water sediments lying beneath the Mississippi River plume on the Louisiana shelf were studied using benthic chambers and sediment cores. Three sites were chosen with distinctly different characteristics. One was overlain by oxic water where aerobic respiration dominated organic matter remineralization. The second site was overlain by oxic water but organic matter remineralization was dominated by sulfate reduction. The third site was overlain by hypoxic water and aerobic remineralization was of minor significance. Major differences were observed in the fluxes of CO₂(17–56 mmol m⁻² d⁻¹), O₂(2–56 mmol m⁻² d⁻¹) and nutrients (e.g., NH₄ ⁺, 2.6–4.2 mmol m⁻² d⁻¹) across the sediment-water interface, and the relative importance of different electron acceptors, even though the sites were in close proximity and at nearly the same water depth. Large variations in the efficiency of organic-C burial (3%–51%) were also calculated based on a simplified model of the relationships between the fraction of organic matter remineralized by sulfate reduction and the fraction of sulfide produced that is buried as pyrite. These observations demonstrate the high degree of spatial heterogeneity of benthic biogeochemistry in this important near-deltaic environment.     

Benthic nutrient fluxes in the intertidal flat within the Changjiang （Yangtze River） Estuary

In an annual cycle from March 2005 to February 2006, benthic nutrient fluxes were measured monthly in the Dongtan intertidal flat within the Changjiang （Yangtze River） Estuary. Except for NH4^＋, there always showed high fluxes from overlying water into sediment for other four nutrients. Sediments in the high and middle marshes, covered with halophyte and consisting of macrofauna, demonstrated more capabilities of assimilating nutrients from overlying water than the low marsh. Sampling seasons and nutrient concentrations in the overlying water could both exert significant effects on these fluxes. Additionally, according to the model provided by previous study, denitrification rates, that utilizing NO3- transported from overlying water （Dw） in Dongtan sediments, were estimated to be from -16 to 193 μmol·h^-1·m^-2 with an average value of 63 μmol·h^-1·m^-2 （n=18）. These estimated values are still underestimates of the in-situ rates owing to the lack of consideration of DN, i.e., denitrification supported by the local NO3^- production via nitrification.     

Determination of denitrification in the Chesapeake Bay from measurements of N2 accumulation in bottom water

This study demonstrates the feasibility of using direct N₂ measurements in an estuary for determination of denitrification. High precision measurements of dinitrogen: argon ratios (N₂∶Ar) were made by membrane inlet mass spectrometry on water samples taken along the length of the Chesapeake Bay in July and October 2004. The N₂∶Ar ratio in low salinity surface water was elevated relative to air saturation by 0.3–0.5% with no systematic change along the length of the Bay. N₂∶Ar in high salinity bottom water exhibited a linear increase in the landward direction along a 144-km longitudinal section. In this section of the Bay covering 20% of the main stem, the bottom water salinity was statistically uniform and the increase in N₂∶Ar was in the direction of net residual current flow. The system was analyzed as a capped river with the assumption that N₂ entered the water from the underlying sediment where denitrification is known to take place. The rate of denitrification needed to support the measured increase in N₂ was calculated using an average residual current velocity and water column depth. The increase in N₂ with distance (0.046μmol N l⁻¹ km⁻¹) equated to an average denitrification flux of 73 μmol N m⁻² h⁻¹. N₂ fluxes determined on sediment cores taken from the source and terminus regions of the delineated water mass were 45±23 and 83±39 μmol N m⁻² hr⁻¹, respectively, which were not statistically different from the whole system estimate. The measured change in oxygen concentration within the bottom water was used to estimate nitrogen remineralization and the efficiency of denitrification. Denitrification efficiency (nitrogen denitrified/nitrogen remineralized) was estimated to be in the range of 22–28% for the bottom water sediment system and 30–37% considering the sediment zone alone.     

Nitrogen Retention in Coastal Marine Sediments—a Field Study of the Relative Importance of Biological and Physical Removal in a Danish Estuary

The aim of this study was to elucidate the relative importance of physical versus biological loss processes for the removal of microphytobenthic (MPB) bound nitrogen in a coastal environment at different times of the year via a dual isotope labeling technique. We used ⁵¹Cr, binding to inorganic sediment particles but not participating in any biological processes, and ¹⁵N–NO₃ ^?, taken up by the MPB and turned over as part of the MPB nitrogen pool. Retention, down-mixing, and export of ¹⁵N were due to both biological and physical processes, so that by comparing retention of the two isotopes, we were able to discern the relative importance of physical and biological processes. The isotope marking was supplemented with measurements of sediment chlorophyll biomass and oxygen fluxes, allowing us to evaluate MPB biomass as well as primary production vs. respiration in the sediment. In spring/early summer, the system was characterized by tight N cycling and high N retention: any remineralized N was immediately taken up and retained in the MPB biomass. In late summer and autumn, the system was still physically stable, but high biological mediated N losses were observed. In early winter, the system was physically dominated due to low MPB biomasses and activity combined with a significant storm event. Our data support the hypothesis that the relative balance between physical and biological processes in determining retention and removal of MPB-bound nitrogen changes seasonally.     

Microelectrode Study of Oxygen Uptake and Organic Matter Decomposition in The Sediments of Xiamen Western Bay

Sediment cores were sampled from Xiamen Western Bay at five sites during the summer and winter of 2006 and Hg–Au microelectrodes were used to make on board measurements of the concentration gradients of dissolved oxygen, Mn²⁺, and Fe²⁺ within the sediments. The O₂ concentrations decreased sharply from about 200 μmol L⁻¹ in the bottom seawater to zero within a depth of a few millimeters into the sediment. Dissolved Mn²⁺ was detected below the oxic zones with peak concentrations up to 600 μmol L⁻¹, whereas dissolved Fe²⁺ had peak concentrations up to 1,000 μmol L⁻¹ in deeper layers. The elemental contents of organic carbon and nitrogen within the sediments were analyzed and their C/N ratios were in the range of 9.0 to 10.1, indicative of heavy terrestrial origin. Sediments from two sites near municipal wastewater discharge outlets had higher organic contents than those from the other sites. These high organic contents corresponded to shallow O₂ penetration depths, high dissolved Mn²⁺ and Fe²⁺ concentrations, and negative redox potentials within the sediments. This indicated that the high organic matter content had promoted microbial respiration within the sediments. Overall, the organic content did not show any appreciable decrease with increasing sediment depths, so a quadratic polynomial function was used to fit the curve of O₂ profiles within the sediments. Based on the O₂ profiles, O₂ fluxes across the seawater and sediment interface were estimated to be in the range 6.07 to 14.9 mmol m⁻² day⁻¹, and organic carbon consumption rates within the surface sediments were estimated to be in the range 3.3 to 20.8 mgC cm⁻³ a⁻¹. The case demonstrated that biogeochemistry within the sediments of the bay was very sensitive to human activities such as sewage discharge.     

Non-conservative P and N fluxes and net ecosystem production in San Quintin Bay,México

San Quintin Bay, Mexico, is a hypersaline coastal lagoon where the main external forcing of physical and biogeochemical processes is oceanic. Non-conservative fluxes of inorganic N (ΔDIN) and P (ΔDIP), and aspects of net ecosystem metabolism were studied in this lagoon during August 1995, August 1996, and February 1996, by following the LOICZ budgetary modeling approach. The whole-system water exchange time during summer (≈13 d) was shorter than in winter (≈26 d) as northwesterly winds enhancing mixing with the ocean are more intense during the spring-summer upwelling season. Whole-bay ΔDIP values of +0.2 to +0.3 mmol m^?2 d^?1 in August, and <+0.01 mmol m^?2 d^?1 in February indicate that the system is a net source of dissolved inorganic phosphorus (DIP). DIP fluxes from the Bay to the ocean during August are probably balanced by a net import of particulate organic matter between 1,000–1,300 × 10³ mol C d^?1, equivalent to a net ecosystem production (NEP) between ?24 and ?31 mmol C m^?2 d^?1. ΔDIN showed opposite trends in August 1995 and August 1996, with a net import of 13×10³ mol N d^?1 and a net export of 30× 10³ mol N d^?1, respectively. However, N fixation minus denitrification (“apparent denitrification”) estimates of ≈?4 mmol N m^?2 d^?1 in both periods indicate that San Quintin Bay is a net sink of nitrogen. Results from a 3-box model indicate that during summer Box C, adjacent to the ocean, contributed 70–80% of the excess DIP produced in the whole-system. This observation and high apparent denitrification values of ≈?7 mmol N m^?2 d^?1 at the entrance of the Bay, suggest that the net heterotrophic condition of San Quintin Bay in summer is largely determined by imports of labile phytoplanktonic carbon generated in the adjacent ocean during upwelling.A net flux of organic carbon of 30×10⁶ mol C yr^?1 was estimated from Box C, adjacent to the ocean, to Box B, locally known as Bahia Falsa, which is the area designated for oyster aquaculture in the lagoon. It is estimated that this net organic carbon supply is almost equivalent to the annual oyster food demand; our estimate is that oyster aquaculture in San Quintin Bay accounts for the vast majority of the net heterotrophy of Bahia Falsa.     

Sulfate reduction and porewater chemistry in a gulf coast<Emphasis Type="Italic">Juncus roemerianus</Emphasis> (Needlerush) marsh

Sulfate reduction rates were measured over the course of a year in the sediments of aJuncus roemerianus marsh located in coastal Alabama. Sulfate reduction rates were typically highest in the surface 0–2 cm and at depths corresponding to peak belowground biomass of the plants. The highest volume-based sulfate reduction rate measured was 1,350 μmol liter-sediment⁻¹ d⁻¹ in September 1995. Areal sulfate reduction rates (integrated to 20 cm depth) were strongly correlated to sediment temperature and varied seasonally from 15.2 mmol SO ₄ ²⁻ m⁻² d⁻¹ in January 1995 to 117 mmol SO ₄ ²⁻ m⁻² d⁻¹ in late August 1995. Despite high sulfate reduction rates porewater dissolved sulfide concentrations were low (<73 μM), indicating rapid sulfide oxidation or precipitation. Sulfate depletion data indicated that net oxidation of sediment sulfides occurred in March through May, following a period of infrequent tidal flooding and during a period of high plant production. Porewater Fe(II) reached very high levels (maximum of 969 μM; mean for all dates was 160 μM), particularly during periods of high sulfate reduction. The annual sulfate reduction rate integrated over the upper 20 cm of sediment was 22.0 mol SO ₄ ²⁻ m⁻² yr⁻¹, which is among the highest rates measured in a wetland ecosystem. Based on literature values of net primary production inJ. roemerianus marshes, we estimate that an amount equivalent to 16% to 90% of the annual belowground production may be remineralized through sulfate reduction.     

Nutrient Fluxes from Sediments in the San Francisco Bay Delta

In September 2011 and March 2012, benthic nutrient fluxes were measured in the San Francisco Bay Delta, across a gradient from above the confluence of the Sacramento and San Joaquin Rivers to Suisun Bay. Dark and illuminated core incubation techniques were used to measure rates of denitrification, nutrient fluxes (phosphate, ammonium, nitrate), and oxygen fluxes. While benthic nutrient fluxes have been assessed at several sites in northern San Francisco Bay, such data across a Delta–Bay transect have not previously been determined. Average September rates of DIN (nitrate, nitrite, ammonium) flux were net positive across all sites, while March DIN flux indicated net uptake of DIN at some sites. Denitrification rates based on the N₂/Ar ratio approach were between 0.6 and 1.0 mmol m^?2 day^?1, similar to other mesotrophic estuarine sediments. Coupled nitrification–denitrification was the dominant denitrification pathway in September, with higher overlying water nitrate concentrations in March resulting in denitrification driven by nitrate flux into the sediments. Estimated benthic microalgal productivity was variable and surprisingly high in Delta sediments and may represent a major source of labile carbon to this ecosystem. Variable N/P stoichiometry was observed in these sediments, with deviations from Redfield driven by processes such as denitrification, variable light/dark uptake of nutrients by microalgae, and adsorption of soluble reactive phosphorus.     

Marine Macrophyte Wrack Inputs and Dissolved Nutrients in Beach Sands

We investigated the role of sandy beaches in nearshore nutrient cycling by quantifying macrophyte wrack inputs and examining relationships between wrack accumulation and pore water nutrients during the summer dry season. Macrophyte inputs, primarily giant kelp Macrocystis pyrifera, exceeded 2.3 kg m⁻¹ day⁻¹. Mean wrack biomass varied 100-fold among beaches (range = 0.41 to 46.43 kg m⁻¹). Mean concentrations of dissolved inorganic nitrogen (DIN), primarily NO_x⁻-N, and dissolved organic nitrogen (DON) in intertidal pore water varied significantly among beaches (ranges = 1 to 6,553 μM and 7 to 2,006 μM, respectively). Intertidal DIN and DON concentrations were significantly correlated with wrack biomass. Surf zone concentrations of DIN were also strongly correlated with wrack biomass and with intertidal DIN, suggesting export of nutrients from re-mineralized wrack. Our results suggest beach ecosystems can process and re-mineralize substantial organic inputs and accumulate dissolved nutrients, which are subsequently available to nearshore waters and primary producers.     

The effect of groundwater seepage on nutrient delivery and seagrass distribution in the northeastern Gulf of Mexico

A hypothesis was tested to determine if a relationship exists between rates of submarine groundwater discharge and the distribution of seagrass beds in the coastal, nearshore northeastern Gulf of Mexico. As determined by nonparametric statistics, four of seven seagrass beds in the northeastern Gulf of Mexico had significantly greater submarine groundwater discharge compared with adjacent sandy areas, but the remainder exhibited the opposite relationship. We were thus unable to verify if a relationship exists between submarine groundwater discharge and the distribution of seagrass beds in the nearshore sites selected. A second objective of this study was to determine the amount of nitrogen and phosphorus delivered to nearshore areas by submarine groundwater discharge. We considered new nutrient inputs to be delivered to surface waters by the upward flux of fresh water. This upward flux of water encounters saline porewaters in the surficial sediments and these porewaters contain recycled nutrients; actual nutrient flux from the sediment to overlying waters includes both new and recycled nutrients. New inputs of nitrogen to overlying surface waters for one 10-km section of coastline, calculated by multiplying groundwater nutrient concentrations from freshwater wells by measured seepage rates, were on the order of 1,100±190 mol N d⁻¹. New and recycled nitrogen fluxes, calculated by multiplying surficial porewater concentrations by measured seepage rates, yielded fluxes of 3,600 ±1,000 mol N d⁻¹. Soluble reactive phosphate values were 150±40 mol P d⁻¹ using freshwater well concentrations and 130±3.0 mol P d⁻¹ using porewater concentrations. These values are comparable to the average nutrient delivery of a small, local river.     

Seasonal variations in sediment sulfur cycling in the Ballastplaat mudflat, Belgium

Sulfate reduction rate (SRR) and pools of reduced inorganic sulfur, acid volatile sulfide (AVS), chromium reducible sulfur (CRS), and elemental sulfur (S^o), were studied from June 1990 till March 1992 at two locations on the Ballastplaat mudflat in the Scheldt estuary. The sediment composition at station A was mainly sand with low organic content whereas sediments at station B were dominated by silt and clay with high organic content. SRR was positively related to temperature; more pronounced at station B (Ea=190 kJ mol⁻¹) than at station A (Ea=110 kJ mol⁻¹). The maximum SRR values observed equalled 14 μmol cm⁻³ d⁻¹ at station B and 1 μmol cm⁻³ d⁻¹ at station A. AVS was the dominant radiolabelled end product of the sulfate reduction reaction, except in surface sediments where pyrite and S^o were more dominant. However, CRS was the predominant reduced inorganic sulfur pool in the sediments. Both AVS and CRS pools showed temporal variations out of phase with SRR. SRR peaked in summer, while the concentrations of AVS and CRS were highest in fall. The accumulation of AVS and CRS started late summer after depletion of oxidants, which had accumulated during winter and spring. The estimated annual SRR and thus sulfide production in the upper 15 cm of station B was of the order of 100 mol m⁻² yr⁻¹, and at station A of the order of 12 mol m⁻² yr⁻¹. The sulfur mass balance shows that only a very small fraction, if any, of the produced sulfide is retained as reduced inorganic sulfur in the sediment.