Genetic and morphological description of Eucalanus spinifer T. Scott, 1894 (Calanoida: Eucalanidae), a circumglobal sister species of the copepod E. hyalinus s.s. (Claus, 1866)

A distinct genetic form of the eucalanid calanoid copepod Eucalanus hyalinus s.l. was identified in subtropical and temperate waters of the Pacific, Atlantic, and Indian Oceans. Results from mitochondrial (16S rRNA, COI) and nuclear (ITS2) genetic markers suggest that the two E. hyalinus forms are reproductively isolated. Eucalanus spinifer T. Scott is taken out of synonymy with E. hyalinus and is applied to the smaller of the two genetic forms, increasing the number of species in the genus Eucalanus to a total of six. Adult females of the sister species E. hyalinus s.s. and E. spinifer can be distinguished morphologically by the shape of the anterior portion of the head in lateral and ventral views, asymmetry in the length of antennule segments 22 and 23, length ratios of 22/5 and 23/5 of the longer of the antennules, the length of the caudal rami, and total body size, as measured by total length or prosome length. We illustrate and describe both adult females and males of E. spinifer, and discuss aspects of sexual dimorphism. The sister species are sympatric throughout much of their circumglobal biogeographic distributions, but appear to have centers of abundance in slightly different water mass types.     

Functional changes due to invasive species: Food web shifts at shallow Posidonia oceanica seagrass beds colonized by the alien macroalga Caulerpa racemosa

Multiple stable isotope analyses were used to examine the trophic shifts at faunal assemblages within the invading macroalga Caulerpa racemosa in comparison to established communities of Posidonia oceanica seagrass meadows. Sampling of macrobenthic invertebrates and their potential food sources of algal mats and seagrass meadows in Mallorca (NW Mediterranean) showed differences in species composition of faunal and primary producers among seagrass and C. racemosa. Accordingly, changes in food web structure and trophic guilds were observed, not only at species level but also at community level. The carbon and nitrogen isotope signatures of herbivores, detritivores and deposit feeders confirmed that the seagrass provided a small contribution to the macrofaunal organisms. δ¹³C at the P. oceanica seagrass and at the C. racemosa assemblages differed, ranging from −6.19 to −21.20‰ and −2.67 to −31.41‰, respectively. δ¹⁵N at the Caulerpa mats was lower (ranging from 2.64 to 10.45‰) than that at the seagrass meadows (3.51–12. 94‰). Significant differences in isotopic signatures and trophic level among trophic guilds at P. oceanica and C. racemosa were found. N fractionation at trophic guild level considerable differed between seagrass and macroalgae mats, especially for detritivores, deposit feeders, and herbivores. Filter feeders slightly differed with a relatively lower N signal at the seagrass and CR values at community level and at trophic guild level were higher in the C. racemosa invaded habitats indicating an increase in diversity of basal resource pools. C. racemosa did seem to broaden the niche diversity of the P. oceanica meadows it colonised at the base of the food web, may be due to the establishment of a new basal resource. The extent of the effects of invasive species on ecosystem functioning is a fundamental issue in conservation ecology. The observed changes in invertebrate and macrophytic composition, stable isotope signatures of concomitant species and consequent trophic guild and niche breadth shifts at invaded Caulerpa beds increase our understanding of the seagrass systems.     

漳州西施舌线粒体基因组全序列:腔蛤蜊属存在新种的证据

利用长PCR扩增漳州西施舌线粒体DNA(ZZ-mtDNA),用引物步移法测序,获得线粒体基因组DNA全序列,研究其基因组特点。结合双壳类49个物种线粒体全基因组,分析基因间核苷酸和蛋白质氨基酸序列的差异,构建系统进化树,探讨漳州西施舌系统演化地位。研究结果表明:漳州西施舌线粒体基因组DNA全长17 199 bp,A+T含量为64.2%,编码36个基因,其中12个蛋白质编码基因,22个转运RNA基因(tRNAs),2个核糖体RNA基因(lrRNA 和srRNA),全部基因均位于重链上,tRNASer为单拷贝,tRNAMet为双拷贝;非编码区占10.9%(1 882 bp/17 199 bp),其中,主非编码区为882 bp,与RZ-mtDNA主非编码区差异明显,另有一个较大(400 bp)的非编码区为漳州西施舌特异性非编码区;以双壳纲帘蛤目文蛤属3种贝类、贻贝目贻贝属4种贝类、珍珠贝目牡蛎科的6种贝类为参照,对编码基因的核苷酸序列和蛋白质氨基酸序列进行差异分析显示,漳州西施舌与日照西施舌达到了种间差异水平。线粒体基因组编码的基因、tRNA组成、非编码区均揭示漳州西施舌是腔蛤蜊属的一个新种。     

Contaminants and habitat choice in the Baltic Sea: Behavioural experiments with the native species, Monoporeia affinis, and the invasive genus, Marenzelleria

The invasive polychaete genus, Marenzelleria and the native amphipod, Monoporeia affinis are food and habitat competitors in the Baltic Sea. Previous studies have shown that moderate densities of Marenzelleria can affect the behaviour of M. affinis. To examine the short-term interactive effects of interspecific habitat choice and environmental contaminants a series of habitat colonisation experiments were performed. The contaminants examined included harbor sediments and sediment spiked with the antifouling substances, Cu, Zn and Irgarol. Polychaetes and amphipods were exposed to contaminants in single-species and two-species experiments. In spiked-sediment experiments, M. affinis showed clear dose-dependent response. These experiments verified that behavioural response of M. affinis to different habitats is a sensitive method for testing toxicity under controlled conditions. In experiments with three different harbor sediments and reference sediment both species showed the lowest preference for the reference sediment. This sediment also had the lowest content of quality food, indicating that factors such as food quality and quantity may override the disturbing effects of contaminants in natural sediments. The presence of Marenzelleria spp. did not affect amphipod habitat choice, indicating no short-term effects, which implies that both species can co-exist provided sufficient food is available.     

Variability in growth,development and reproduction of the non-native seaweed Sargassum muticum (Phaeophyceae) on the Irish west coast

This study compared seasonal growth, development and reproduction of the invasive brown macroalga Sargassum muticum in habitats with different wave exposure on the Irish west coast. Three field sites with different degrees of wave exposure were chosen for monthly observations to reflect different habitats that were characteristic of the Irish west coast. Growth and receptacle development differed considerably between sites. Growth and receptacle development was lower at the most sheltered site. Here, S. muticum showed signs of early fragmentation in April/May during the two years of investigation (2007 and 2008), whilst the population at an exposed site developed normally and plants grew to a maximum average length of 163 cm by July, with the onset of fragmentation in August. Sargassum muticum in a tide pool exhibited a similar seasonal growth cycle as plants at the exposed open shore site. Overall growth however was stunted, with plants reaching a maximum length of only 30–40 cm in July. Receptacle development was also inhibited at the sheltered site, with a maximum of only 10% of plants found to be fertile during spring and summer 2008, while plants at the exposed site and the tide pool exhibited 100% plant fertility by August. An extensive occurrence of the native epiphyte Pylaiella littoralis on S. muticum was noticed during field sampling at the sheltered study site which may have contributed to inhibited development of S. muticum observed in this area.     

Distribution of amphipods Ischyrocerus on the red king crab, Paralithodes camtschaticus: Possible interactions with the host in the Barents Sea

The determination of costs and benefits experienced by crustaceans as a result of occupation by their symbionts has received increased attention from marine ecologists. However, the interactions between some important species and their associates remain unclear. We examined the distribution of amphipods in the genus Ischyrocerus on the red king crab Paralithodes camtschaticus, a commercially important species, in two areas of the Barents Sea. Ischyrocerus commensalis was found on 30.5% of crabs in Dalnezelenetskaya Bay (DZB) with the mean number per crab being 55.1, in Dolgaya Bay (DLB) these rates were 28.6% with 19.3 specimens per crab. Sympatric species Ischyrocerus anguipes was found on 13.5% of crabs in DZB with a mean of 7.3 individuals per host, in DLB it had much lower occurrence (1.3% and 1.5 specimens per host). There were no significant differences between proportions of male and female crabs infested by amphipods in both areas examined. Prevalence of amphipods was similar among years examined except for I. commensalis on small crabs (carapace length CL <90 mm) and I. anguipes on large crabs (CL >90 mm) in DZB. We found that I. commensalis and I. anguipes are not egg predators of P. camtschaticus in the Barents Sea, at least in summer. High numbers of I. commensalis occur in crab gills, and both mean intensity of the amphipods and their empty tubes increased with crab size. In the gills, I. commensalis predominated in the section nearest the mouth parts. Possible negative impacts for the hosts due to gills infestation are discussed. In contrast, I. anguipes were predominately found on the carapace and limbs of crabs and appears to be a less specific symbiont of P. camtschaticus. Both amphipod species seem to be commensals, however possible negative impacts for the host could not be excluded.     

Cadmium release caused by the die-back of the saltmarsh cord grass Spartina anglica in Poole Harbour (UK)

As in many other areas, the perennial cord grass Spartina anglica C.E. Hubbard has been extremely successful at colonising the English and Irish south coasts, but it is dying back for reasons that are not completely understood. The present study considers the relationship between die-back and metal concentrations in estuarine sediment. No obvious impact of the metal contamination on the S. anglica growth/die-back could be detected in the study zone, Poole Harbour, although the die-back did seem to have substantially influenced the metal concentrations in the sediments of the estuary. Based on core profiles, the remaining patches of S. anglica still retain elevated concentrations and the overall cadmium concentrations in the sediments have risen since 1925. However, considerable quantities of the cadmium stored in the sediment by S. anglica appear to have been washed out rapidly in the die-back zones. Should serious erosion of the saltmarsh occur, triggered for example by sea-level rise, then sudden and high levels of cadmium release may cause harmful effects to marine biota.     

Characterization of the southeastern US black sea bass (Centropristis striata) pot commercial fishery and implications for western North Atlantic right whale (Eubalaena glacialis) management and policy

A vital component of marine policy is the conservation and management of diverse marine resources. In the southeastern US, commercial fishermen target black sea bass (Centropristis striata) with pots from North Carolina to Cape Canaveral, Florida. During the fall through spring fishing season, western North Atlantic right whale (Eubalaena glacialis) distribution overlaps the black sea bass commercial pot fishery. Fishermen interviews revealed that the number of pots set ranged from 3 to 240 and the number of pots set per trawl ranged from 1 to 18. Generally, the amount of gear increased from south to north.     

Population ecology of fiddler crab, Uca lactea annulipes (Decapoda: Ocypodidae) in Sirik mangrove estuary,Iran

Fiddler crabs are known as the most conspicuous bioturbating animals in mangrove forest, which by their burrowing activities promote nutrient cycling in ecosystems. Mangroves, crabs and bacteria are connected in the form of positive feedback loop, whereby an increase in the activity of any participant will tend to increase the activity of all others as well. Population structure, growth, mortality, recruitment, biomass and production of fiddler crabs as dominant species of deposit-feeder crabs have been investigated from May 2005 to March 2006 in the Sirik mangrove estuary in the eastern part of Strait of Hormuz. Ten 1 m² squares of the substrate were randomly sampled during low tide. There was a significant change in organic content in the sampling area during study period. The sex ratio was significantly deviated from 1:1 ratio in large sizes, where males were dominated year around. Fiddler crabs showed seasonal growth pattern during a year, which the maximum growth was observed during autumn and early summer and ceased during winter by low temperature. Growth parameters were estimated by Appeldoorn's method and fitted with seasonalized von Bertalanffy growth models. The Kimura likelihood ratio test revealed significant differences in the overall growth curves between males and females, originated from the differences in k$k$ and L_∞$L_{\mathrm{\infty }}$ between sexes. Males were found to exhibit higher growth rate and larger size than females, this could be attributed to the higher investment of energy for reproduction in females. Reproduction was restricted to spring and early summer, while recruitment occurs at the end of summer. Total annual production of males and females was 37.90 and 10.05 g dry weight/10 m² respectively and major production took place during early summer. Because of impact of temperature on the activity of fiddler crabs in subtropical regions, density of crabs has significant positive correlation with temperature (P < 0.01), while growth rate shows significant negative correlation with organic matter of sediment (P < 0.05). In conclusion these crabs showed lower mortality and production rate with the seasonal growth and recruitment in comparison with tropical species.     

海南万宁小海近岸表层海水弧菌组成及其变化

于2006年冬至2007年秋分四个季度对海南万宁小海近岸表层海水的弧菌种类分布及数量变化进行了调查.共分离到27种弧菌属细菌,其中副溶血弧菌、创伤弧菌、溶藻弧菌、霍乱弧菌、河流弧菌和拟态弧菌6种弧菌为主要弧菌.在6种主要弧菌中,溶藻弧菌、副溶血弧菌和霍乱弧菌在夏季和秋季检出率较高;河流弧菌在春季和夏季的检出率较高;拟态...     

Spatial diversity of rocky midlittoral macro-invertebrates associated with the endangered species Patella ferruginea (Mollusca: Gastropoda) of Tunisian coastline

The present study focuses on horizontal spatial variability of benthic macrofauna associated with Patella ferruginea. Thirty-six samples collected at 12 transects belonging to 4 midlittoral sites along the rocky Tunisian coastline, were examined. A total of 44 species belonging to 5 taxa were found. Multivariate analysis applied on gathered data did not show a horizontal spatial variability at small scale (between transects), but at large scale, between sites as well as sectors. Thus, three groups of communities were identified (GI: Korbous and El Haouaria; GIIa: Zembra Island and GIIb: Kelibia). The distribution of species abundance within these groups revealed that crustaceans were the most abundant taxon, due to the overwhelming dominance of Chthamalus stellatus. This substratum appeared to create favourable micro-habitats for the installation of molluscs including gastropods. Regarding the low diversity index (H') and evenness (J), they seemed to reflect a disturbance and a demographic unbalance within these communities. The heterogeneity of substrate surface, created by C. stellatus specimens appeared to be caused by various complex interactions established between the key components of these communities in particular suspension feeders, predators, herbivorous molluscs and macroalgae. Thus, the dynamic status of each of these communities is the result of these complex interactions.     

Interactions between a natural food web,shellfish farming and exotic species: The case of the Bay of Mont Saint Michel (France)

To ensure sustainable uses of the coastal zone, an integrated ecosystemic approach and ecosystem models are required to frame ecological processes and evaluate environmental impacts. Here, a mass-balance trophic (Ecopath) model of the Mont Saint Michel Bay (MSMB) was developed, to analyze the bay's functioning as an ecosystem. This bay, intensively exploited by fishing and for shellfish farming, is also suffering from the proliferation of the gastropod Crepidula fornicata, an exotic species.     

石斑鱼肠道原籍嗜冷杆菌( PsychrobacterSP.)SE6作为益生菌的体内外评价

研究了石斑鱼肠道原籍嗜冷杆菌SE6在体外的抑菌特性及对人工胃肠液的耐受特性,在此基础上研究了饲料中添加SE6(108CFU/g)对斜带石斑鱼生长性能和免疫功能的影响。体外试验结果表明:SE6对副溶血弧菌、哈维氏弧菌、梅氏弧菌和金黄色葡萄球菌等常见水产致病菌均有一定的抑制作用。pH为4.0的人工胃液能促进SE6的生长,处理2和4 h存活率分别为110.7%和173.0%;pH为3.0的人工胃液处理2 h后活菌数为1.59×105 CFU/cm3,存活率为1.36%,但SE6不能耐受pH为2.0的人工胃液。经浓度分别为0.1%,0.3%,0.5%和0.7%的胆盐处理3 h后,SE6的存活率分别为89.17%,88.33%,77.17%和12.33%。动物试验结果显示:投喂SE6 60 d后试验组饵料系数(0.95±0.01)显著低于对照组(1.03±0.02)。试验组血清补体C3在试验全期均高于对照组,补体C4含量在投喂SE6 60 d时显著上升。血清IgM含量在投喂30 d时显著上升。总之,嗜冷杆菌SE6能抑制多种常见病原菌的生长,而且对模拟胃肠道环境具有一定的耐受能力,添加到饲料中能显著提高石斑鱼饵料利用率,增强动物的免疫功能。     

Variations in the pallial organ sizes of the invasive oyster, Crassostrea gigas, along an extreme turbidity gradient

Spatial size variations of labial palps, gills and the adductor muscle of the invasive feral oyster, Crassostrea gigas, were studied along two gradients of suspended particulate matter (SPM) concentrations in the temperate macrotidal Bourgneuf Bay, (annual mean SPM concentration gradient of 21.0–154.0 mg l⁻¹) and the adjacent Loire Estuary (annual mean SPM concentration gradient of 24.1–630.4 mg l⁻¹) on the French Atlantic Coast. The gill-to-palp (G:P) ratios decreased with increasing turbidity, both in the bay and the estuary. Changes in G:P ratios were chiefly related to palp area variations, increasing gradually from low turbidity to very high-turbidity sites, while gill area showed no clear relationship with turbidity conditions. The G:P ratio, showing a significant relationship (r² = 0.97) with SPM concentrations, is proposed as a pallial organ index of oyster acclimation to turbidity conditions. The area of the striated part of the adductor muscle was always greater than that of the smooth one, and adductor muscle area tended to decrease when SPM concentration increased. These observations show the morphological capacity of the oyster C. gigas to tolerate SPM concentrations above the feeding cessation thresholds previously determined experimentally. They also suggest that pallial organ size variations could help explain the success of recent feral oyster invasions in temperate turbid ecosystems.     

Stage-V copepodites of Calanus sinicus and Calanus jashnovi (Copepoda: Calanoida) in mesopelagic zone of Sagami Bay as identified with genetic markers, with special reference to their vertical distribution

We applied genetic makers to identify Calanus species occurring in Sagami Bay, Japan, in order to investigate their vertical distribution in the upper 1000 m. First, interspecific genetic distances of three gene loci, mitochondrial small ribosomal RNA (srRNA), nuclear internal transcribed spacers 1 (ITS1) and 2 (ITS2), were estimated from morphologically distinguishable adult females of Calanus sinicus, Calanus jashnovi and Calanus pacificus that were collected from Sagami Bay, the Kuroshio Extension and the Oyashio region, respectively. The highest levels of interspecific genetic distance were observed in srRNA, followed by ITS1 and ITS2. The intraspecific genetic distances within C. sinicus were much lower than the interspecific genetic distances, indicating that DNA sequences in these loci are consistent with the morphological differences. This information was used as a criterion for species identification based on DNA sequence variation, and allowed us to identify the fifth copepodites (CVs) or younger stages of these species. Next, the vertical distribution of Calanus species was investigated in Sagami Bay in May 2006, on the basis of a stratified sampling in the upper 1000 m. By applying the genetic markers, 23 individuals comprising all copepodite stages were allocated into either C. sinicus or C. jashnovi, and the small- and large-sized CVs were identified as C. sinicus and C. jashnovi, respectively. The total abundance of C. sinicus was highest at 0-50 m and decreased with depth. On the contrary, CV individuals of C. sinicus were abundant not only in 0-50 m but also below 200 m with minimum occurrences in 150-200 m depth. C. jashnovi was much less abundant than C. sinicus and comprised of only CIV and CV which occurred in the upper 100 m and deeper than 50 m depths, respectively. The abundance of C. sinicus in the 1000-m water column of Sagami Bay was at a level comparable to that in shelf waters, suggesting the importance of off-shelf individuals in the biological production and organic transport in the respective areas.     

Spatial spring distribution of the copepod Eurytemora affinis (Copepoda,Calanoida) in a restoring estuary,the Scheldt (Belgium)

The spatial spring distribution of Eurytemora affinis (adults and C5) in the Scheldt estuary (Belgium) brackish and freshwater reaches was studied in between 1996 and 2007. The bulk of the E. affinis population being generally situated in the brackish water reach (salinity > 0.5); we studied which environmental factors are responsible for its recent sporadic occurrence in the freshwater estuarine reach. Using PLS analysis, it is shown that its presence upstream is limited by a sufficient oxygen concentration (>4 mg l⁻¹) that is associated with temperature. Not only are the environmental conditions in the upstream zone important, but also the frequent presence of an O₂ minimum zone in the mid-estuary (O₂ min < 1.3 mg l⁻¹) seems to block the movement of the downstream E. affinis population in an upstream direction. Occasionally, the bulk of the population is however situated upstream. During these periods, high E. affinis abundance was also observed in the Durme tributary. Our findings suggest the possibility to use E. affinis as an “indicator” species of water quality, but also lead us to stress the necessity to consider conditions over the entire estuary when studying restoration effects, not exclusively in the zone of interest.     

Deep-water stands of Cystoseira zosteroides C. Agardh (Fucales,Ochrophyta) in the Northwestern Mediterranean: Insights into assemblage structure and population dynamics

Populations dominated by Cystoseira zosteroides, an endemic and threatened Mediterranean seaweed, colonize deep-water rocky habitats down to more than 50 m depth. Assemblages dominated by this species display high algal and invertebrate species richness. Algal biomass averages 1134 g dw m⁻². Erect and turf algae account for only 25% of total algal dry weight, while encrusting corallines are responsible for the remaining 75%. Sponges, bryozoans and ascidians constitute the dominant sessile macrofauna. Cystoseira zosteroides is the dominant erect algae, with a mean biomass of 60.6 g dw m⁻², and densities ranging from 4 to 7 plants m⁻². The alien turf alga Womersleyella setacea has a biomass of 104.2 g dw m⁻² and covers most of the understory substrate. The size-frequency distribution of C. zosteroides populations shows differences over time. Mean annual growth of the main axis is around 0.5 cm and mean annual mortality rate is lower than 2%. Recruitment was almost nil during the studied period of time (10 years). Processes structuring these deep-water Cystoseira stands must be driven by episodic disturbances, after-disturbance recruitment pulses, and long periods of steady growth that last at least 10 years. However, it is also possible that recruitment is irreversibly inhibited by the alien alga W. setacea in which case these old-growth stands are faced with extinction. The highly diversified assemblages and the low growth and low mortality rates of C. zosteroides indicate high vulnerability to natural and anthropogenic disturbances, and call for effective measures to ensure their conservation.