Interspecific introgression and changes in population structure in a flatfish species complex after the Prestige accident

Oil spills cause aggressive impacts on marine ecosystems affecting immense areas and the species inhabiting them. If wastes are not cleaned up properly, the remnants may affect local populations for a long time. This work focuses on the long-term impacts of the Prestige spillage that occurred off Galician coast (Spain) in November 2002. Model species were two sympatric flatfish, the megrims Lepidorhombus whiffiagonis and Lepidorhombus boscii. Samples obtained before and nine years after the Prestige accident from affected and unaffected areas were genotyped for six hypervariable nuclear markers and for the mitochondrial D-loop sequence. The results revealed a high proportion of post-F1 interspecific hybrids in the area affected, and also increased intraspecific population differentiation likely due to such localized introgression of foreign genes. These changes suggest the appearance of a hybrid zone following the accident and emphasize the need of paying special attention to potential evolutionary impacts of oil spills.     

Plant growth and the performance of mangrove wetland microcosms for mariculture effluent depuration

This study established wetland microcosms that were either unplanted or planted in monoculture with native mangrove species in Taiwan (Avicennia marina, Rhizophora stylosa, and Lumnitzera racemosa) for the purpose of receiving high-salinity mariculture effluents; additionally, the microcosms operated at different hydraulic retention times (HRTs). Plant growth and the performance of the microcosms with respect to pollutant removal were investigated. The results showed that seedlings of all three mangrove species survived and grew sufficiently well under continuous flooding. The presence of mangroves consistently improved SS, BOD₅, and TP removal, particularly under short HRT conditions. The mangrove microcosms removed pollutants from the mariculture effluents with efficiencies of 5.7-27.1% (SS), 4.9-36.3% (BOD₅), 18.7-29.9% (TP), 21.2-49.8% (NH₄-N), and 5.4-37.7% (NO_x-N). A. marina and L. racemosa were more tolerant of continuous flooding than R. stylosa. However, no species displayed consistently superior performance in decreasing all pollutant-related parameters investigated. For all pollutants, microcosms operating at a 2-d HRT exhibited a higher removal efficiency than those operating at a 0.5-d HRT.     

Plasmid incidence in marine bacteria isolated from petroleum polluted sites on different petroleum hydrocarbons

Oil-degrading bacteria isolated from oil spills, an industrial bay, and an offshore oil field by liquid enrichment on crude oils and polynuclear aromatic hydrocarbon compounds were screened for extra-chromosomal DNA. Plasmids were detected in 21% of the strains isolated on whole crude oil and in 17% of the strains isolated on polynuclear aromatic hydrocarbons. Multiple plasmids were observed in 50% of the plasmid-containing strains. Pseudomonas was the predominant genus isolated during the study. Plasmids do not appear to be of importance to these strains during degradation of freshly introduced oil at a nonpolluted site such as might be the case in an ocean oil spill. Plasmids do appear to be significant in the adaptation of Pseudomonas species to chronic petroleum pollution.     

Prevalence and genetic profiles of Escherichia coli from mangroves and mangrove associated foods off Goa,India

A total of 120 samples comprising of water (45), sediment (45) and mangrove originated food (30) collected from mangrove ecosystems of Goa were screened for Escherichia coli employing ISO-16654 method. Seventy-one (59.16%) samples were positive for E. coli. The E. coli isolates were further characterized by serotyping, virulence gene profiling and pulsed field gel electrophoresis (PFGE). Water and sediment samples were analyzed for physico-chemical parameters. The serotypes reported were O1, O10, O13, O17, O36, O41, O50, O68, O105, O116, O141, O148, O159, O162 and rough types while, 23 strains could not be typed. The stx1 and stx2 genes were detected in 33(46.47%) and 16(22.53%) isolates, respectively. The XbaI restriction digestion patterns of the stx positive strains were diverse. Interestingly, few strains isolated from diarrheal patients and from water, sediment and food from mangrove sources were genetically similar. The study showed that the mangrove ecosystem could be a potential reservoir for pathogenic E. coli.     

Monitoring oil spill bioremediation using marsh foraminifera as indicators

A controlled experiment was conducted in June 2000 to identify the environmental impacts of weathered crude oil on an Atlantic coastal salt marsh to help evaluate in situ biological remediation techniques for restoring the environment. Foraminifera, marsh microfossils known to be sensitive to a range of environmental stress factors, were used to monitor the effects of the residual oil and the experimental treatments. Results show that the foraminifera responded quickly to the oil and that the oil had a statistically significant, negative impact, as demonstrated by a dramatic increase in deformities in the tests of Miliammina fusca, compared to specimens from the non-oiled control plots. The results clearly show that foraminifera can be excellent indicators of oil pollution using only the percent of deformed tests. The advantages that foraminifera provide are the ease of sampling, processing and examination, with the added benefit that these organisms leave a fossil record.     

Method for rapid localization of seafloor petroleum contamination using concurrent mass spectrometry and acoustic positioning

Locating areas of seafloor contamination caused by heavy oil spills is challenging, in large part because of observational limitations in aquatic subsurface environments. Accepted methods for surveying and locating sunken oil are generally slow, labor intensive and spatially imprecise. This paper describes a method to locate seafloor contamination caused by heavy oil fractions using in situ mass spectrometry and concurrent acoustic navigation. We present results of laboratory sensitivity tests and proof-of-concept evaluations conducted at the US Coast Guard OHMSETT national oil spill response test facility. Preliminary results from a robotic seafloor contamination survey conducted in deep water using the mass spectrometer and a geo-referenced acoustic navigation system are also described. Results indicate that this technological approach can accurately localize seafloor oil contamination in real-time at spatial resolutions better than a decimeter.     

Effects of salinity on treatment of municipal wastewater by constructed mangrove wetland microcosms

The effects of salinity on the removal of dissolved organic carbon and nutrients from municipal wastewater by constructed mangrove microcosms planted with Aegiceras corniculatum were investigated. During the four-month wastewater treatment, the treatment efficiency was reduced by high salinity, and the removal percentages of dissolved organic carbon, ammonia-N and inorganic N dropped from 91% to 71%, from 98% to 83% and from 78% to 56%, respectively, with salinity increasing from 0 to 30 parts per thousands (ppt). In spite of such inhibition at high salinity, 100% of the effluents discharge from the constructed mangrove microcosms still complied with the discharge standards set by the Hong Kong Government for Coastal Water Control Zones. These results suggested that constructed mangrove wetland treatment systems were promising to effectively treat municipal wastewater, even those with high salinity. In addition, the denitrification potential in soil was found to be retarded by the high salinity while mangrove plants grew best at 15 ppt salinity condition.     

Application of entropy analysis of in situ droplet-size spectra in evaluation of oil chemical dispersion efficacy

In situ droplet-size distributions were measured using a laser in situ scattering and transmissiometry (LISST-100X) particle size analyzer during the evaluation of natural and chemical dispersion efficiency of crude oils under different wave and current conditions. An entropy grouping of the in situ dispersed oil droplet-size spectra has classified the multi-modal droplet-size distributions into different groups based on similar droplet-size spectra characteristics within groups and distinction between groups. A generalized linear logistic regression model was fitted to analyze the effects of a number of factors and their interactions on the grouping of oil droplet-size spectra. The grouped results corresponded to the oil dispersion efficiency at different levels. This new method for droplet-size distribution data analysis can have significant implication in field evaluation of natural and chemical dispersion efficiency of oil.     

Oil pollution and seabirds: Atlantic Canada 1976–1977 and some implications for northern environments

Chemical analyses of the oils on dead or moribund seabirds from Atlantic Canada during the winter of 1976–1977 indicated that some of the birds were contaminated with oil spilled by the Argo Merchant grounding, some by oil probably from the Grand Zenith sinking, and still others by oil from various small local spills of unknown origin. These victims demonstrated that an extremely minute oiling may lead to the death of a seabird when the effects of the oil are synergistically combined with the stresses imposed by severe environmental conditions. This may intensify the impact of oil in the Arctic and thereby have a profound effect on seabird populations.     

Clam farmers and Oystercatchers: Effects of the degradation of Lanice conchilega beds by shellfish farming on the spatial distribution of shorebirds

The Manila clam Ruditapes philippinarum cultivation is an original shellfish farming activity strongly mechanized. In the Chausey archipelago (France) this activity settles on the Lanice conchilega beds, habitat known to host a rich and diversified benthic macrofauna and which is an attractive feeding ground for birds. A first study highlighted that this activity had strong negative effects on the L. conchilega beds and their associated benthic macrofauna. Here we assess the impacts of such an activity on the Eurasian Oystercatcher Haematopus ostralegus for which Chausey is one of the most important national breeding sites and which is also a common species in winter, spring and autumn migrations. We found that Oystercatchers significantly selected the L. conchilega beds to feed and that their spatial distribution was significantly modified after the creation of new clam concessions. In a context of a growing disappearance of pristine coastal ecosystems for the benefit of anthropo-ecosystems, we discuss the problem of the degradation of such benthic habitats with a low resilience which may loose their high functional value.     

Long-term differences in annual litter production between alien (Sonneratia apetala) and native (Kandelia obovata) mangrove species in Futian,Shenzhen, China

Annual litter production in alien (Sonneratia apetala) and native (Kandelia obovata) mangrove forests in Shenzhen, China were compared from 1999 to 2010. S. apetala had significantly higher litter production than K. obovata, with mean annual total litter of 18.1 t ha⁻¹ yr⁻¹ and 15.2 t ha⁻¹ yr⁻¹, respectively. The higher litter production in S. apetala forest indicates higher productivity and consequently more nutrient supply to the estuarine ecosystems but may be more invasive due to positive plant-soil feedbacks and nutrient availability to this alien species. Two peaks were recorded in S. apetala (May and October), while only one peak was observed in K. obovata, in early spring (March and April). Leaf and reproductive materials were the main contributors to litter production (>80%) in both forests. These results suggest that the ecological function of S. apetala and its invasive potential can be better understood based on a long-term litter fall analysis.     

Effectiveness of bacterial inoculum and mangrove plants on remediation of sediment contaminated with polycyclic aromatic hydrocarbons

The remediation of mangrove sediment contaminated with mixed polycyclic aromatic hydrocarbons (PAHs) having 3-, 4- and 5-rings by natural attenuation, bioaugmentation, phytoremediation and its combination was compared by greenhouse microcosm studies. At Days 90 and 154, the decreases of PAHs in contaminated mangrove sediment by phytoremediation, planted with one-year old Aegiceras corniculatum, and bioaugmentation, the inoculation of PAH-degrading bacterial strains isolated from mangrove sediment, either SCSH (Mycobacterium parafortuitum) or SAFY (Sphingobium yanoikuyae), were not better than that by natural attenuation (the non-vegetated and un-inoculated microcosms). The populations of SCSH and SAFY in sediment could not be maintained even with repeated inoculation, suggesting that the two isolates were not able to compete with the indigenous microbes and had little enhancement effect. Although some PAHs were accumulated in roots, root uptake only accounted for <15% of the spiked PAHs and the effect of plants on remediation were also insignificant. At the end of the 154-day experiment, the mass balance calculation revealed that the overall losses of PAHs by phytoremediation were comparable to that by bioaugmentation but were lower than that by natural attenuation, especially for the high molecular weight PAHs. Under natural attenuation, around 90% fluorene, 80% phenanthrene, 70% fluoranthene, 68% pyrene and 32% benzo[a]pyrene in contaminated sediment were removed. These results demonstrated that the mangrove sediment itself had sufficient indigenous microorganisms capable of naturally remedying PAH contamination.     

Temporal changes in Sphingomonas and Mycobacterium populations in mangrove sediments contaminated with different concentrations of polycyclic aromatic hydrocarbons (PAHs)

The change in community diversity and structure of the indigenous, dominant, polycyclic aromatic hydrocarbon (PAH)-degrading bacterial genera, Sphingomonas and Mycobacterium, due to contamination in the environment is not very well known. A combination of PCR-DGGE with specific primers and a cultivation-dependent microbiological method was used to detect different populations of Sphingomonas and Mycobacterium in mangrove sediments. The structure of the entire bacterial community (including Sphingomonas) did not show a shift due to environmental contamination, whereas the diversity of Mycobacterium populations in mangrove sediments with higher PAH contamination increased from exposure between Day 0 and Day 30. The isolated Mycobacterium strains migrated to the same position as the major bands of the bacterial communities in Mycobacterium-specific DGGE. A dioxygenase gene system, nidA, which is commonly found in PAH-degrading Mycobacterium strains, was also detected in the more highly contaminated sediment slurries. The present study revealed that Mycobacterium species were the dominant PAH-degraders and played an important role in degrading PAHs in contaminated mangrove sediments.     

The relative impacts of spills of two alternative fuels on the microalgae of a sandy site: a microcosm study

Electric power generation in the United States uses substantial amounts of fuel oil #6. Orimulsion, an emulsion of bitumen, water, and a surfactant, is an alternative. A portion of the information that managers need to compare the two fuels is their relative environmental impacts. Both fuels are shipped by sea, so the impact of spills on the marine benthos is a concern. We used microcosms to assess the relative impacts of simulated spills of these fuels on the microalgae of shallow subtidal sandy bottoms. Response variables included microalgal abundance, primary productivity, ratio of chlorophyll a to phaeophytin, and ratio of primary production to chlorophyll a. During our 88-day experiment, we found no significant differences between the fuels for any variable. We suggest that weathering before the spill reaches the shore removes the most toxic components, rendering the fuels essentially equal in their impact on benthic microalgae.     

An oil spill-food chain interaction model for coastal waters

An oil spill-food chain interaction model, composed of a multiphase oil spill model (MOSM) and a food chain model, has been developed to assess the probable impacts of oil spills on several key marine organisms (phytoplankton, zooplankton, small fish, large fish and benthic invertebrates). The MOSM predicts oil slick thickness on the water surface; dissolved, emulsified and particulate oil concentrations in the water column; and dissolved and particulate oil concentrations in bed sediments. This model is used to predict the fate of oil spills and transport with respect to specific organic compounds, while the food chain model addresses the uptake of toxicant by marine organisms. The oil spill-food chain interaction model can be used to assess the environmental impacts of oil spills in marine ecosystems. The model is applied to the recent Evoikos-Orapin Global oil spill that occurred in the Singapore Strait.     

Monitoring of impact of anthropogenic inputs on water quality of mangrove ecosystem of Uran,Navi Mumbai,west coast of India

Surface water samples were collected from substations along Sheva creek and Dharamtar creek mangrove ecosystems of Uran (Raigad), Navi Mumbai, west coast of India. Water samples were collected fortnightly from April 2009 to March 2011 during spring low and high tides and were analyzed for pH, Temperature, Turbidity, Total solids (TS), Total dissolved solids (TDS), Total suspended solids (TSS), Dissolved oxygen (DO), Biochemical oxygen demand (BOD), Carbon dioxide (CO₂), Chemical oxygen demand (COD), Salinity, Orthophosphate (O-PO₄), Nitrite–nitrogen (NO₂–N), Nitrate–nitrogen (NO₃–N), and Silicates. Variables like pH, turbidity, TDS, salinity, DO, and BOD show seasonal variations. Higher content of O-PO₄, NO₃–N, and silicates is recorded due to discharge of domestic wastes and sewage, effluents from industries, oil tanking depots and also from maritime activities of Jawaharlal Nehru Port Trust (JNPT), hectic activities of Container Freight Stations (CFS), and other port wastes. This study reveals that water quality from mangrove ecosystems of Uran is deteriorating due to industrial pollution and that mangrove from Uran is facing the threat due to anthropogenic stress.     

Abilities and genes for PAH biodegradation of bacteria isolated from mangrove sediments from the central of Thailand

PAH-degrading bacteria, including Novosphingobium sp. PCY, Microbacterium sp. BPW, Ralstonia sp. BPH, Alcaligenes sp. SSK1B, and Achromobacter sp. SSK4, were isolated from mangrove sediments. These isolates degraded 50–76% of 100 mg/l phenanthrene within 2 weeks. Strains PCY and BPW also degraded pyrene at 98% and 71%, respectively. Furthermore, all of them probably produced biosurfactants in the presence of hydrocarbons. Interestingly, PCY has a versatility to degrade various PAHs. Molecular techniques and plasmid curing remarkably revealed the presence of the alpha subunit of pyrene dioxygenase gene (nidA), involving in its pyrene/phenanthrene degrading ability, located on megaplasmid of PCY which has never before been reported in sphingomonads. Moreover, genes encoding ferredoxin, reductase, extradiol dioxygenase (bphA3A4C) and exopolysaccharide biosynthetase, which may be involved in PAH degradation and biosurfactant production, were also found in PCY. Therefore, we conclude that these isolates, especially PCY, can be the candidates for use as inoculums in the bioremediation.     

Effects of chronic oil pollution on a Caribbean coral reef

Sublethal effects of oil pollution on coral reefs may not become manifest except over very long periods of time. Uniform reefs with an Acropora palmata belt (2 m depth) and a Montastrea annularis community (4 m depth) were originally present along the coast near an oil refinery that has been in operation for more than 60 years in Aruba. Quantitative surveys of reef structure, coral cover, and numbers of juvenile corals along 15 km of the coast showed these reef characteristics to vary significantly in relation to the location of the refinery and the very persistent local current direction. The spatial structure of the reef has deteriorated, living coral cover is low, and less juveniles are present in front and downcurrent of the refinery. Some coral species, such as A. palmata and M. annularis, show a large gap in their distribution along the coast but a species such as Diploria strigosa is relatively abundant in the polluted area. The results of chronic oil pollution (such as spills, clean-ups, etc.) are, after 60 years, clearly discernible over a distance of 10 to 15 km along the reef.     

The use of limpets as monitor of PAHs pollution in the Cantabrian coast

The concentrations of 24 parental and methylated polycyclic aromatic hydrocarbon (PAH) levels in common limpet (Patella vulgata) were measured in 15 coastal localities of the southern Bay of Biscay and 2 sites per locality for 2 years (spring and autumn of 2004 and 2005, respectively). Although the average concentrations shown a wide variability among the sites and the season, several sites showed a remarkable high concentration (PAH_tot>900 ng g⁻¹ d.w.) or medium (300-800 ng g⁻¹ d.w) levels, but in most of the cases the initial high concentrations decreased sharply from one campaign to the following. Moreover, based on ratios of individual isomers concentration, petrogenic and pyrolitic sources were distinguished suggesting more than one source. Finally, based on the results of this work and comparing with previously reported data, it can concluded that limpets can be used as sentinel organisms in coastal environmental monitoring, even when oil spills are involved.     

Regularities in the transformation of oil pollution in watercourses based on long-term observational data

Results of long-term studies of crude oil transformations in water and bottom sediments of river ecosystems polluted as a result of oil spills are presented. Regularities in changes in the concentration ratio of hydrocarbon and resinous components of oil in water and bottom sediments under the effect of natural selfpurification processes of aquatic ecosystems are found out.