Reproductive pattern and egg development of the deep-sea crab Paromola cuvieri (Brachyura,Homolidae) around the Canary Islands (NE Atlantic)

This work investigated the biology of Paromola cuvieri in the Atlantic Ocean, including reproductive patterns, sex structure, depth distribution and egg development. Females were more abundant than males, mainly at depths greater than 600 m. Males were dominant in size classes larger than 110 mm carapace width (CW), especially over 120 mm, for which only males were observed. The mean length of both sexes decreased with depth. P. cuvieri appears to have continuous reproduction throughout the year. Large females tend to spawn mainly between summer and winter, but smaller females spawn during the summer. Four maturity categories were identified based on the ovary colour, and these categories were histologically validated. Three categories of testes were identified according to their colour and morphology. Sexual maturity was estimated at sizes between 71.6 and 74.0 mm CW for females and at 91.0 mm CW for males. The relative growth showed changes along the ontogeny, at 73.6 mm CW (females) and 91.3–92.2 mm CW (males). Egg development appears to not be completely synchronous, and two colour patterns can be observed simultaneously. Four stages of egg development were found: eggs undivided and fully filled with yolk in orange egg masses; eggs with a free region of yolk visible in orange or red egg masses; embryos with slightly pigmented, crescent-shaped eyes in brown egg masses; and embryos with visible pigmented structures, enlarged eyes, segmented appendages and abdomen in brown egg masses. The mean number of external eggs carried by females in stage I was estimated to be 315,753±19,267. Three species of barnacle were observed on the exoskeleton: Poecilasma aurantia, Poecilasma crassa and Heteralepas microstoma (Cirripedia, Thoracica).     

4种笛鲷的线粒体DNA多样性分析

取红鳍笛鲷(Lutjanus erythopterusBloch)、紫红笛鲷(Lutjanus argentimaculatusFor-skal)、勒氏笛鲷(Lutjanus russelliBleeker)和约氏笛鲷(Lutjanus johniBloch)肝脏组织,分离纯化其线粒体DNA,用限制性内切酶酶切进行了限制性片段长度多态性分析。在红鳍笛鲷共发现4种单倍型,单倍型间的平均遗传距离为0.010 1,其mtDNA多态度为0.002 9。在紫红笛鲷共发现6种单倍型,单倍型间的平均遗传距离为0.015 1,其mtDNA多态度为0.005 5。在勒氏笛鲷共发现3种单倍型,单倍型间的平均遗传距离为0.008 6,其mtDNA多态度为0.001 2。在约氏笛鲷共发现5种单倍型,单倍型间的平均遗传距离为0.008 3,其mtDNA多态度为0.002 0。     

一株大西洋深海酵母菌MAR-MC(3)的鉴定及生理特征分析

从大西洋中脊的深海底质中分离到一株酵母菌MAR-MC(3).该菌细胞为卵圆形,单端芽殖;在温度和NaCl浓度分别为35℃、3.4%条件下生长良好;能利用木糖、麦芽糖、半乳糖、蔗糖以及纤维二糖、阿拉伯糖、棉子糖、肌醇、木醇,但不能利用海藻糖;根据表型特征及rDNA序列分析鉴定为季也蒙毕赤酵母(Pichia guilliermondii).     

Molecular evidence for three separate cryptic introductions of the red seaweed Asparagopsis (Bonnemaisoniales,Rhodophyta) in South Africa

The red seaweed genus Asparagopsis Montagne (Bonnemaisoniales) contains two widely introduced species that are considered notorious seaweed invaders worldwide, Asparagopsis armata and A. taxiformis, both characterised by heteromorphic, diplo-haplontic life histories. To uncover cryptic introductions of Asparagopsis along the South African coastline and identify ‘Falkenbergia’ isolates (i.e. tetrasporophytic life-history phase morphologically identical between species), the mitochon-drial cox2–3 spacer was sequenced from gametophytes of Asparagopsis taxiformis from Scottburgh, KwaZulu-Natal, on the East Coast, Knysna Lagoon on the South Coast and from tetrasporophytes, otherwise unidentifiable to species level, collected from False Bay near Cape Town on the South-West Coast and Tsitsikamma on the South Coast. Only tetrasporophytes of the temperate Asparagopsis armata were encountered from the Cape Peninsula (Cape Town) probably as far east as to Port St Johns, Eastern Cape province. This is considered an introduced species, and was first collected at Kommetjie (Cape Peninsula) in 1935. Gametophytes of the warm-temperate to tropical A. taxiformis were first collected at Reunion Rocks near Durban in 1984; the KwaZulu-Natal material studied here belongs to an Atlantic Mediterranean cryptic lineage. This taxon is an ecological dominant in some intertidal and shallow subtidal areas in northern KwaZulu-Natal, and is thus considered ‘introduced’ and ‘invasive’. In contrast, A. taxiformis gametophytes, collected in Knysna Lagoon in 2008, clustered with individuals of Indo-Pacific lineage 2. The latter is considered a major invasive lineage in the western Mediterranean, but at present is categorised as introduced in South Africa. This study provides molecular evidence of three independent, cryptic introductions in South Africa, one of them probably very recent, and this is discussed with respect to potential vectors responsible for transport.     

An economic analysis of illegal, unreported and unregulated (IUU) fishing: Key drivers and possible solutions

The fight against illegal, unreported and unregulated (IUU) fishing activities has recently become a high priority in the international fisheries management agenda. While a number of academic contributions have sought to improve the understanding of the problem, most remain limited in scope. To help policy makers obtain a more comprehensive picture of the situation, the OECD Committee for Fisheries recently completed a study addressing the full economic dimensions of IUU fishing in an integrated manner. This paper presents the analytical framework developed by the OECD as well as some of the key results of the study regarding the causes of and the potential solutions to this widespread problem.     

A cryptic species of Mytilus (Mollusca: Bivalvia) on the west coast of South Africa

A biochemical genetic study of the mussels Perna perna and Choromytilus meridionalis on the west coast of South Africa revealed the presence of an unreported mytilid mussel that had previously been mistaken, because of its shell colour polymorphism, for either P. perna or a hybrid between P. perna and C. meridionalis. The gene products of 19 protein-coding loci in P. perna. C. meridionalis and in the newly recognized mussel were examined by means of horizontal starch-gel electrophoresis. The results showed that there was no allele-frequency overlap between any of these mussel taxa, thus implying little or no genetic relatedness between them. A morphological examination showed that the previously unreported mytilid has a pitted resilial ridge (similar to that of Perna), an anterior adductor muscle (unlike either Perna or Choromytilus), and an undivided posterior foot retractor-muscle scar (unlike Perna). Such features are diagnostic of the genus Mytilus. The South African Mytilus has morphological traits that are more characteristic of M. galloprovincialis of the Mediterranean Sea than of the more cosmopolitan M. edulis. which occurs in the northern and southern Pacific and Atlantic oceans. A large heterozygosity in Mytilus sp. argues against a recent dispersal from the Mediterranean Sea via a small founder population. Rather, the presence of Mytilus sp. in South Africa may represent a relict population of a wider geographic distribution of M. galloprovincialis resulting from Pleistocene cooling. However, the warmer water at lower latitudes could have still prevented dispersal of M. edulis, a species adapted to colder waters.     

Dioxin compounds in the deep-sea rose shrimp Aristeus antennatus (Risso, 1816) throughout the Mediterranean Sea

Polychlorodibenzo-p-dioxins (PCDDs) and polychlorodibenzofurans (PCDFs) are among the more toxic anthropogenic contaminants. They are fat-soluble and accumulate in animal tissues. Exposure to PCDD/Fs can cause several endocrine, reproductive and developmental problems in animals, including human beings. Several studies have demonstrated that fish and invertebrates living in association with sediments are exposed to and accumulate contaminants, but to date there have been no studies of PCDD/Fs contamination in deep-sea regions. Specimens of Aristeus antennatus (Risso, 1816) were collected from depths of 600–2500 m at different points in the Mediterranean Sea, from the western basin off the coast of Barcelona to the central basin off the Peloponnesian Peninsula, with otter trawl gear. Amounts of PCDD/Fs were measured in different animal tissues by high resolution gas chromatography coupled to high resolution mass spectrometry (HRGC–HRMS). This is the first study to report the presence of PCDD/Fs in deep-sea organisms dwelling at depths below 600 m. A. antennatus presented levels of PCDD/Fs of the same order of magnitude, or slightly higher, as those found in shallow-water species (Melicertus kerathurus) with respect to land-generated contamination. This highlights the widespread distribution of these pollutants and the potential threat posed to the biodiversity of fragile and vulnerable ecosystems such as the deep-sea. PCDD/F levels detected in the edible parts (muscle) of the commercial shrimp A. antennatus were clearly below the toxic limit value established by European legislation. Levels followed the trend muscle<ovary<hepatopancreas, according to the lipid content of the organs in question. The specific profile of toxic PCDD/F congeners in the studied Penaeid shrimp specimens was characterized mainly by octachlorodibenzo-p-dioxin (OCDD), 2,3,7,8-tetrachlorodibenzofuran (TCDF) and 2,3,4,7,8-pentachlorodibenzofuran (PeCDF) congeners. Moreover, non 2,3,7,8-substituted congeners bioaccumulated in this species, as observed in shallow-water crustaceans. PCDD/Fs were found in the shrimp A. antennatus throughout the Mediterranean Sea. Total PCDD/Fs burdens were higher in shrimps caught in the western Mediterranean than in those caught at eastern Mediterranean sites. There was a tendency for higher levels of PCDD/F contamination in samples obtained from deeper (2500 m) than from shallower sites (600 m).     

Mitochondrial DNA polymorphism (CO1) of three dominant copepod species in the South Atlantic

The Southern Ocean is characterized by the complex system of oceanic fronts that maintain the latitudinal zonality of biotopes. These fronts are boundaries of water masses with different hydrophysical characteristics. We explore the genetic differentiation of the dominant zooplankton species in regards to the complex hydrophysical zonality of the Southern Ocean. The barcoding region of mitochondrial CO1 gene was sequenced for three copepod species, Calanus simillimus, Rhincalanus gigas, and Metridia lucens. These species are the most abundant in the Southern Ocean and form the basis of the zooplankton community. Genetic differentiation was found neither for Calanus simillimus nor for Rhincalanus gigas. The mitochondrial haplotypes of Metridia lucens cluster in two genetically distant groups (Subantarctic and Antarctic) found together only in the Polar Front Zone.     

Differentiation in reproductive traits of geminate mangrove crabs of the genus Aratus (Decapoda: Brachyura) across the Central American Isthmus

The mangrove crab Aratus pisonii was considered to have an amphi‐American distribution; however, a recent study revealed that the Eastern Tropical Pacific populations were genetically distinct, thus representing a new species: Aratus pacificus. These species separated by the Isthmus of Panama have diverged under different environmental conditions that may have influenced their reproductive biology. As the available information about this genus concerns almost exclusively the Caribbean species, the aim of the present study was to analyse and compare reproductive aspects of A. pacificus and A. pisonii obtained from both the Pacific and Caribbean coasts of Costa Rica. Females were collected from April 2011 to April 2012, and reproductive features such as breeding season, size distribution of ovigerous females, fecundity, reproductive output, embryo volume and embryo water content were assessed. Both species produced embryos during the entire sampled period. Most females of A. pacificus carrying embryos close to hatching were found during the rainy season. Ovigerous females of A. pisonii were substantially larger and reached sexual maturity at a larger size than females of A. pacificus. Embryo production started in A. pacificus at a smaller female size than in A. pisonii. As fecundity increased with female size, the average fecundity was lower in A. pacificus. Females of A. pisonii produced larger embryos, which might be related to lower food availability: higher energy content in the embryo enhances the chances of larval survival. These data regarding reproductive features of the Pacific and Caribbean species support the conclusion to separate A. pacificus from A. pisonii.     

Bathymetric patterns of deep-sea gastropod species diversity in 10 basins of the Atlantic Ocean and Norwegian Sea

Bathymetric patterns of macrofaunal species diversity are best documented in the western North Atlantic where diversity is a unimodal function of depth, peaking in the mid-bathyal zone and being depressed in the upper slope and abyss. There are few inter-basin studies of diversity-depth trends that are controlled for taxonomy, sampling gear, and diversity measures. In this paper, we compare gastropod diversity gradients in the North American Basin of the Atlantic to estimates of diversity in 9 other regions: the Norwegian Sea, West European Basin, Guiana Basin, Gambia Basin, Equatorial Mid-Atlantic, Brazil Basin, Angola Basin, Cape Basin and Argentine Basin. All samples were collected with epibenthic sleds, and diversity calculated by the Sanders-Hurlbert normalized expected number of species. While sampling in other regions is generally less complete than in the western North Atlantic, results indicate that a unimodal pattern is not universal. Diversity can increase, decrease or show no relationship with depth. The level of diversity also varies among basins relative to the western North Atlantic, being depressed in the Norwegian Sea, at bathyal depths in the eastern North Atlantic, and below an oxygen minimum zone in the Cape Basin, and generally elevated at tropical latitudes and in abyssal regions where food supply is high. Associations between gastropod diversity and the ecology and geology of basins suggest that productivity, oxygen concentration, hydrographic disturbance and evolutionary-historical processes may be implicated in shaping bathymetric diversity gradients, but specific causes are difficult to discern. Much more intensive sampling, analyses of other major taxa, and more detailed ecological data are necessary to understand deep-sea biogeography at within- and between-basin spatial scales.     

Reproductive Biology of Liocarcinus puber and L holsatus (Decapoda, Brachyura, Portunidae) from the Gower Peninsula, South Wales

Abstract. Routine monthly samples of the commercially important portunid crab Liocarcimtx puber and the sympatric but ecologically separated L. holsatus were collected from the waters and shores around the Gowcr Peninsula, South Wales, between November 1983 and September 1985.
The pubertal moult in L. puber occurred at 38 mm CW (carapace width) (females) and 42 mm CW (males). In L. holsatus this occurred at 17 mm (females) and 18.5 mm CW (males). The median size of ovigcrous females was 49.2 ± 6.7 mm CW in L. puber and 26.5 ± 2.0 mm CW in L. holsatus.
Moulting and copulation occurred between spring and autumn, the moulting period of males being earlier than that of the females. Ovigcrous L. holsatus were recorded throughout the year, with highest proportions between February and April. L. puber were ovigcrous mainly between January and March; none was recorded between September and November. The number of eggs of the wild brood (range: 39,000–280,000 for L. holsatus and 40.000–262.000 for L. puber ) was related to female body size as y = 3.099.51 c^0.1126x, r = 0.90, n = 21 and y = 6,335.98 c^0.051x, r = 0.88, n = 23, respectively, where y = number of eggs and x = carapace width (mm).
Following successful copulation, females of both species were able to spawn more than once during an intcrmoult period.     

Nitrogen cycling in deep-sea sediments of the Porcupine Abyssal Plain, NE Atlantic

Rates of transformation, recycling and burial of nitrogen and their temporal and spatial variability were investigated in deep-sea sediments of the Porcupine Abyssal Plain (PAP), NE Atlantic during eight cruises from 1996 to 2000. Benthic fluxes of ammonium (NH₄) and nitrate (NO₃) were measured in situ using a benthic lander. Fluxes of dissolved organic nitrogen (DON) and denitrification rates were calculated from pore water profiles of DON and NO₃, respectively. Burial of nitrogen was calculated from down core profiles of nitrogen in the solid phase together with ¹⁴C-based sediment accumulation rates and dry bulk density. Average NH₄ and NO₃-effluxes were 7.4 ± 19 μmol m⁻² d⁻¹ (n = 7) and 52 ± 30 μmol m⁻² d⁻¹ (n = 14), respectively, during the period 1996–2000. During the same period, the DON-flux was 11 ± 5.6 μmol m⁻² d⁻¹ (n = 5) and the denitrification rate was 5.1 ± 3.0 μmol m⁻² d⁻¹ (n = 22). Temporal and spatial variations were only found in the benthic NO₃ fluxes. The average burial rate was 4.6 ± 0.9 μmol m⁻² d⁻¹. On average over the sampling period, the recycling efficiency of the PON input to the sediment was 94% and the burial efficiency hence 6%. The DON flux constituted 14% of the nitrogen recycled, and it was of similar magnitude as the sum of burial and denitrification. By assuming the PAP is representative of all deep-sea areas, rates of denitrification, burial and DON efflux were extrapolated to the total area of the deep-sea floor (>2000 m) and integrated values of denitrification and burial of 8 ± 5 and 7 ± 1 Tg N year⁻¹, respectively, were obtained. This value of total deep-sea sediment denitrification corresponds to 3–12% of the global ocean benthic denitrification. Burial in deep-sea sediments makes up at least 25% of the global ocean nitrogen burial. The integrated DON flux from the deep-sea floor is comparable in magnitude to a reported global riverine input of DON suggesting that deep-sea sediments constitute an important source of DON to the world ocean.     

Large‐scale connectivity of Grapsus grapsus (Decapoda) in the Southwestern Atlantic oceanic islands: integrating genetic and morphometric data

The degree of connectivity among island populations can influence their demography and affect their level of genetic differentiation. In this study we investigated genetic and morphometric differences among four populations of Grapsus grapsus (Linnaeus 1758), in Saint Peter and Saint Paul Archipelago (0°55′ N, 29°20′ W), Fernando de Noronha Archipelago (3°50′ S, 32°24′ W), Rocas Atoll (3°50′ S, 33°49′ W) and Trindade Island (20°30′ S, 29°20′ W) from 2003 to 2011. Morphometric results indicated the existence of two distinct groups based on the morphology of their chelae (Trindade Island/Saint Peter and Saint Paul Archipelago versus Fernando de Noronha/Rocas Atoll). In addition, genetic variation in a fragment of the mitochondrial control region revealed substantial differentiation between Trindade and the other islands, with Trindade Island showing only exclusive haplotypes. The congruence of the genetic and morphologic analyses suggests the occurrence of a divergent population in Trindade Island as well as high connectivity among the three remaining equatorial islands. This is the first study to assess the level of morphologic differentiation and genetic connectivity of a species among all four Southwestern Atlantic oceanic islands. Our results provide valuable insight into understanding connectivity through surface ocean currents and suggest that the unstable current system of this area could be responsible for different dispersal patterns. We also suggest that the design of Brazilian marine protected areas should be adjusted to provide stronger protection for Trindade Island as it harbors unique genetic and morphologic variation in G. grapsus.     

Isolation By Distance (IBD) signals in the deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) (Decapoda,Panaeidae) in the Mediterranean Sea

The identification of boundaries of genetic demes is one of the major goals for fishery management, and few Mediterranean commercial species have not been studied from a genetic point of view yet. The deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) is one of the most important components of commercial landings in Mediterranean, its fishery aspects have received much attention, regrettably without any concern for the genetic architecture of its populations. The population structure in the central and eastern Mediterranean Sea (captures from six Italian and two Greek landings) has been analysed on the basis of surveys carried out with mitochondrial and AFLP markers. Data revealed the presence of a gradual discrepancy along a west–east axis. This species, occurring mainly at a depth of between 100 and 400 m, is not strongly confined in isolated demes, but it demonstrates an ‘Isolation By Distance’ model, within the Mediterranean Sea, which includes geographical areas with a some degree of isolation. The role of hydrodynamic forces, such as currents, water fronts, is discussed; and a further evidence of the ‘Levantine isolation’ within Mediterranean basin is shown.     

Spatio‐temporal variation in biomass of the deep‐sea red crab Chaceon affinis in Gran Canaria Island (Canary Islands,Eastern‐Central Atlantic)

The spatial and temporal biomass distribution of Chaceon affinis and its vulnerability to fishing activity in Gran Canaria (Canary Islands) were investigated. The first goal was to assess the influence of the slope steepness and substrate on the size of crab patches, size of the crabs, and crab biomass. The second goal was to evaluate spatial and temporal variation in the biomass over a 15‐month period. The last goal was to assess the influence of fishing activity upon the reduction in the biomass over the same 15‐month period. Only two or three locations in the sampling area generated high‐biomass contour patches. When these patches were superimposed on the isobath lines, they were coincident with the main depth range described for the species in the area. The map of the biomass values clearly showed three structures with cores of the highest biomass in both muddy and rocky‐muddy areas. The biomass was higher on muddy than on rocky‐muddy bottoms. Biomass was twice as high when steepness was reduced to one third between isobaths of 500 and 900 m. The size of crab patches increases linearly with the decrease in slope steepness. The spatial structure of crabs remained fairly stable over time, showing that biomass changes with depth over time. Maps of the estimated biomass values over the 15‐month period showed the same two main patches over time with the cores of highest biomass separated by a distance of between 4.2 and 4.5 km. Although the bathymetric distribution by sexes showed temporal changes, with a displacement to deeper areas made by both sexes over the studied period, only a partial temporal segregation between males and females was observed. During the study period, crabs underwent a significant decline in biomass and this was consistent with the combined catches of both commercial and experimental fishing in the area. Due to its low mobility, C. affinis is highly vulnerable to local depletion by intensive fishing efforts.