A multibiomarker approach in barramundi (Lates calcarifer) to measure exposure to contaminants in estuaries of tropical North Queensland

A suite of biomarkers were measured in barramundi (Lates calcarifer) from five North Queensland estuaries along a perceived pollution gradient. The biomarkers selected were 7-ethoxyresorufin-O-deethylase (EROD), cytochrome P450, fluorescent aromatic compounds (FACs), DNA integrity, RNA:DNA ratio, cholinesterase activity (ChE), condition factor and hepatosomatic index. The resulting database was subjected to uni- and multi-variate analyses in order to assess the most suitable biomarkers to assess pollution in North Queensland estuaries and to classify the environmental quality of the sites. Principal components analysis (PCA) on the biochemical markers revealed that EROD, EROD/P450, DNA damage and to a lesser extent ChE and FACs were found to be responsive to contaminants in the environment while cytochrome P450, condition factor and the hepatosomatic index were found to be less responsive biomarkers. This study has demonstrated the utility of applying a multibiomarker approach in conjunction with traditional analysis of contaminants in providing valuable information in environmental risk assessment.     

Diatom community dynamics in a tropical,monsoon-influenced environment: West coast of India

Diatom communities are influenced by environmental perturbations, such as the monsoon system that impact the niche opportunities of species. To discern the influence of the monsoon system on diatom community structure, we sampled during two consecutive post-monsoons (2001 and 2002) and the intervening pre-monsoon at Mumbai and Jawaharlal Nehru ports along the central west coast of India. Characteristic temporal shifts in diatom community structure were observed across the sampling periods; these were mainly driven by temperature, salinity and dissolved oxygen saturation. The nutrient-poor pre-monsoon period supported low abundance yet high species richness and diversity of diatoms. Coscinodiscus, Cyclotella, Thalassiosira, Triceratium, Pleurosigma, Skeletonema and Surirella were the most dominant genera. Both the post-monsoon periods, following dissimilar monsoon events, were dominated by Skeletonema costatum, but differed in some of the residual species. Thalassiosira and Thalassionema spp. dominated mostly during post-monsoon I whereas Triceratium and Pleurosigma spp. dominated during post-monsoon II. To understand the underlying ecological mechanisms involved in such dynamics, we focus on the dominant diatom species in post-monsoon periods, S. costatum, that contributes up to 60% to total diatom cell numbers. This research is relevant in light of the fluctuating monsoon regimes over the Asian continent, the confounding effects of anthropogenic eutrophication and the resulting cascading effects on trophic web dynamics.     

Urban seagrass: status of Posidonia oceanica facing the Genoa city waterfront (Italy) and implications for management

A system of five adjacent Posidonia oceanica meadows facing the waterfront of Genoa city (Ligurian Sea, NW Mediterranean) was investigated over different spatial scales (meters-kilometers) using three environmental indices: conservation index (CI), substitution index (SI) and phase-shift index (PSI). CI revealed differences mostly at large spatial scale, distinguishing the poor condition of the meadows closest to Genoa centre and harbour from the comparatively healthy condition of the farthest meadows. SI showed differences mostly at small spatial scale (i.e., within meadows), suggesting the influence of local factors in the re-colonisation of regressed meadows by the seagrass Cymodocea nodosa and/or the invasive alga Caulerpa racemosa. Mapping of PSI showed that the meadows closest to Genoa centre and harbour have undergone a nearly total phase shift and have no real potential for recovery: attempts to re-establish P. oceanica there might be a waste of time and money. On the contrary, the meadows farthest from Genoa centre and harbour showed a comparatively low level of phase shift and could still fully recover given specific management actions.     

Bioavailability and toxicity of aluminium in a model planktonic food chain (Chlamydomonas-Daphnia) at neutral pH

Dissolved aluminium (Al) is generally at low concentrations in neutral freshwater due to its insolubility. However, a fall in pH resulting from acid deposition and mining alters the mobility of Al and so entry to adjacent neutral waters. The present study examines the environmental behaviour, cell-associated surface adsorption/absorption and toxicity of Al at neutral pH to the alga Chlamydomonas gigantea in the presence and absence of the key Al-binding ligand silica. We then examined transfer of Al from C. gigantea to the planktonic crustacean Daphnia pulex. Finally, the effect of Al on the elemental composition (and hence nutritional value) of the two organisms was compared to unexposed controls. C. gigantea increased the amount of Al in the algal culture medium. Binding of Al to extracellular glycoprotein is probably the reason why only one-third of the biosorbed Al was absorbed (accumulated) by C. gigantea. Aluminium concentrations between 50 and 500 μg l⁻¹ reduced growth of C. gigantea at 16 days exposure to the metal. Silica reduced biosorption, accumulation and toxicity of Al by C. gigantea. The concentration of Al in D. pulex fed Al-contaminated C. gigantea for 16 days did not differ from those fed alga grown in the absence of added Al. C. gigantea contaminated with Al contained less sulphur, magnesium, potassium and sodium although only sulphur fell in D. pulex subsequently fed the contaminated alga. Chloride, calcium, iron and silicon were significantly higher in D. pulex.     

Temporal changes in Sphingomonas and Mycobacterium populations in mangrove sediments contaminated with different concentrations of polycyclic aromatic hydrocarbons (PAHs)

The change in community diversity and structure of the indigenous, dominant, polycyclic aromatic hydrocarbon (PAH)-degrading bacterial genera, Sphingomonas and Mycobacterium, due to contamination in the environment is not very well known. A combination of PCR-DGGE with specific primers and a cultivation-dependent microbiological method was used to detect different populations of Sphingomonas and Mycobacterium in mangrove sediments. The structure of the entire bacterial community (including Sphingomonas) did not show a shift due to environmental contamination, whereas the diversity of Mycobacterium populations in mangrove sediments with higher PAH contamination increased from exposure between Day 0 and Day 30. The isolated Mycobacterium strains migrated to the same position as the major bands of the bacterial communities in Mycobacterium-specific DGGE. A dioxygenase gene system, nidA, which is commonly found in PAH-degrading Mycobacterium strains, was also detected in the more highly contaminated sediment slurries. The present study revealed that Mycobacterium species were the dominant PAH-degraders and played an important role in degrading PAHs in contaminated mangrove sediments.     

Gene flow within and between regions: The population genetic structure of the phantom midge Chaoborus crystallinus (Diptera: Chaoboridae)

To determine the gene flow of Chaoborus crystallinus, populations throughout Europe were sampled. To test if the gene flow is higher within regions than between regions and to investigate if regional populations may act as metapopulations, four regions with several populations each were examined. For a detailed analysis of the regional gene flow, subregions within one region were analysed. Allozymes and mitochondrial restriction fragment length polymorphism (RFLP) were used to estimate the relative amounts of gene flow. On the European scale gene flow between populations within regions is higher than between regions. On the regional scale, gene flow between subregions is higher than between populations within subregions. Generally, the genetic differentiation between populations within regions is higher for the mitochondrial RFLP data than for the allozyme data. These results suggest that most of the dispersal is female dominated and mostly takes place between populations within regions. Due to this extensive regional gene flow, local adaptation may be influenced by regional processes. This might have interesting implications for the coevolution of the predator C. crystallinus and its plankton prey.     

Phytoplankton community in the tropical lake of Lagoa Santa (Brazil): Conditions favoring a persistent bloom of Cylindrospermopsis raciborskii

This study presents data on seasonal changes of the phytoplanktonic community of a small tropical lake, Lagoa Santa, in the Brazilian cerrado. Temporal variation in the community structure was small and we observed a permanent dominance of the cyanobacteria Cylindrospermopsis raciborskii. This dominance could be associated to the stability of several environmental conditions. Especially water temperature, always within the optimal growth range for C. raciborskii, and the constant mixed water column may have been important factors driving to the long term dominance of this species in the lake. Remarkable seasonal variation in rainfall, as well as the occasional and non-seasonal variation in nutrient concentrations, were important to explain changes in environmental and biological variables, but were not related to the dominance of C. raciborskii. Pearson's correlation and PCA could just in part explain the stable dominance of this cyanobacterium. Meteorological and chemical factors seem to have no clear control on the variability of the phytoplankton dynamics in Lagoa Santa. The weak relationship between C. raciborskii abundance and environmental variables points to additional intrinsic factors associated to this species that may be important in structuring the phytoplankton assemblage.     

Parasite communities in Boops boops (L.) (Sparidae) after the Prestige oil-spill: detectable alterations

Environmental pollution affects parasite populations and communities, both directly and through effects on intermediate and final hosts. In this work, we present a comparative study on the structure and composition of metazoan parasite communities in the bogue, Boops boops, from two localities (Galician coast, Spain) affected by the Prestige oil-spill (POS). We focus on the distribution of both individual parasite species and larger functional groupings by using both univariate and multivariate analyses. Our results indicate directional trends in community composition that might be related to the Prestige oil-spill disturbance of the natural coastal communities off Galicia. Endoparasite communities in B. boops reflected a notable change in the composition and abundance of the benthic fauna in the localities studied post-spill probably due to organic enrichment after the POS.     

Trace metals in tissues of gray whale (Eschrichtius robustus) carcasses from the Northern Pacific Mexican Coast

Samples of liver, lung, heart, muscle, and blubber tissue from the carcasses of juvenile gray whales (Eschrichtius robustus) found stranded on the coast off the Sea of Cortez, México were analyzed for a range of trace metals (Cu, Fe, Zn, Mn, Ni, Pb, and Cd). The highest concentrations of copper, iron, zinc, and manganese were found in liver; nickel and lead in heart, and cadmium in kidney. In all tissues analyzed, iron, zinc and copper were present in the highest concentrations; however, some whales also showed high levels of cadmium in the kidney which could be related to their diet. Elevated concentrations of copper were found only in the liver of one whale. In general, where low levels of iron were found in the liver, they were associated with poor nutrition. Lead, nickel, manganese and zinc levels in liver were within the normal range, indicating that these whales had not been exposed to high levels of these metals.     

Integrative assessment of organotin contamination in a southern European estuarine system (Ria de Aveiro, NW Portugal): tracking temporal trends in order to evaluate the effectiveness of the EU ban

Organotin (OT) compounds have been used as biocide agents in antifouling paints since the mid 1960s and are now ubiquitous in the marine environment. Due to their high toxicity to non-target species they were banned from antifouling paints in the European Union in 2003 (2002/62/EC directive). The aim of the present work is to assess any obvious decline of the OT environmental levels at Ria de Aveiro (NW Portugal) after the ban. The organotins - monobutyltin (MBT), dibutyltin (DBT), tributyltin (TBT), monophenyltin (MPT), diphenyltin (DPT), triphenyltin (TPT), monoctyltin (MOT), dioctyltin (DOT) and trioctyltin (TOT) - were quantified in the gastropod Nassarius reticulatus, in the mussel Mytilus galloprovincialis and in sediments. Imposex (imposition of male characters on females of gonochorist gastropods) in N. reticulatus was additionally used as a biomarker of TBT pollution. Time comparisons show a slight decrease of imposex between 2003 and 2005 probably as a consequence of the EU ban, though in some cases this trend seems to have started earlier since 2000. The fraction of TBT relatively to its metabolites has been decreasing over the last years but still remains high suggesting that there are still recent inputs of this compound into the study area.     

The sediment composition and predictive mapping of facies on the Propeller Mound—A cold-water coral mound (Porcupine Seabight,NE Atlantic)

Here we provide a detailed qualitative and quantitative insight on recent sediment composition and facies distribution of a cold-water coral (CWC) mound using the example of the Propeller Mound on the Irish continental margin (Hovland Mound Province, Porcupine Seabight). Five facies types on Propeller Mound are defined: (1) living coral framework, (2) coral rubble, (3) dropstone, (4) hardground, representing the on-mound facies, and (5) hemipelagic sediment facies, which describes the off-mound area. This facies definition is based on already published video-data recorded by Remotely Operated Vehicle (ROV), photo-data of gravity cores, box cores, and dredges from sediment surfaces as well as on the composition of the sediment fraction coarser than 125 μm, which has been analyzed on five selected box cores. Sediment compositions of the living coral framework and coral rubble facies are rather similar. Both sediment types are mainly produced by corals (34 and 35 wt%, respectively), planktonic foraminifers (22 and 29 wt%, respectively), benthic foraminifers (both 7 wt%), and molluscs (21 and 10 wt%, respectively), whereas the living coral framework characteristically features additional brachiopods (6 wt%). Hardgrounds are well-lithified coral rudstones rich in coral fragments (>30 surf%), foraminifers, echinoderms, and bivalves. The dropstone facies and the hemipelagic sediment typically carry high amounts of lithoclasts (36 and 53 wt%, respectively) and planktonic foraminifers (35 and 32 wt%, respectively); however, their faunal diversity is low compared with the coral-dominated facies (12 and <2 wt% coral fragments, 7 and 6 wt% benthic foraminifers, and 4 and 0 wt% balanids). Using the maximum likelihood algorithm within ArcGIS 9.2, spatial prediction maps of the previously described mound facies are calculated over Propeller Mound and are based on mound morphology parameters, ground-truthed with the sedimentary and faunal information from box cores, photographs, and video-data. This method is tested for the first time for CWC ecosystems and provides areal estimates of the predicted facies, as well as suggests further occurrences of living coral frameworks, coral rubble, and dropstones, which are not discovered in the area yet. Thus, sediment composition analysis combined with facies prediction mapping might provide a potential new tool to estimate living CWC occurrences and sediment/facies distributions on CWC mounds, which is an important prerequisite for budget calculations and definition of marine protected areas, and which will improve our understanding of CWC mound formation.     

中国南亚热带水库敞水区春季轮虫群落结构:基于分类特征和功能性状的分析

轮虫是淡水后生浮游动物中种类最丰富的类群,是水体生态系统食物链的关键环节.很多种类的轮虫对环境变化敏感,环境条件的改变能够导致其群落结构的快速变化,因此,轮虫群落的组成与变化可从生态位角度得以解释.物种的功能性状可提供更强的生态适应性信号,轮虫的个体大小是反映其代谢与行为的综合性状,而咀嚼器、防御结构及防御行为则反映了...     

Using blood samples to estimate persistent organic pollutants and metals in green sea turtles (Chelonia mydas)

Persistent organic pollutants (POPs) and heavy metals have been reported in a number of green turtle (Chelonia mydas) populations worldwide. However, due to ethical considerations, these studies have generally been on tissues from deceased and stranded animals. The purpose of this study was to investigate the use of blood samples to estimate the tissue contamination of live C. mydas populations. This study analysed 125 POP compounds and eight heavy metals in the blood, liver, kidney and muscle of 16 C. mydas from the Sea World Sea Turtle Rehabilitation Program, Gold Coast, Australia. Strong correlations were observed between blood and tissue concentrations for a number of POPs and metals. Furthermore, these correlations were observed over large ranges of turtle size, sex and condition. These results indicate that blood samples are a reliable non-lethal method for predicting chemical contamination in C. mydas.     

Effect of nutrient supply on photosynthesis and pigmentation to short-term stress (UV radiation) in Gracilaria conferta (Rhodophyta)

The effects of increased photosynthetic active radiation (PAR), UV radiation (UVR), and nutrient supply on photosynthetic activity, pigment content, C:N ratio and biomass yield were studied in tank cultivated Gracilaria conferta (Rhodophyta). Electron transport rate (ETR) and biliprotein content were higher under high nutrient supply (HNS), obtained from fishpond effluents, compared to low nutrient supply (LNS), in contrast to mycosporine-like amino acids (MAAs) dynamic. The high MAA content in LNS-algae could be explained by higher UVR penetration in the thallus and by the competition for the use of nutrients with other processes. Effective quantum yield decreased after short-term exposure to high irradiance whereas full recovery in shade was produced only under slightly heat shock. UVA radiation provoked an additional decrease in photosynthesis under high water temperature. UVB radiation reversed UVA’s negative effect mainly with HNS. Results support that nutrient-sufficiency help G. conferta to resist environmental changes as short-term temperature increase.     

Application of biomarkers for assessing the biological impact of dredged materials in the Mediterranean: the relationship between antioxidant responses and susceptibility to oxidative stress in the red mullet (Mullus barbatus)

In the period 1997-2000, approximately 1,800,000 m3 of material dredged from the Port of Leghorn was discharged into a sea dumping site located 14 miles from the coast. The red mullet (Mullus barbatus) was used as a bioindicator species for monitoring the biological impact of these discharges on a geographical and temporal scale. Organisms were sampled over three years (1998-2000) at different stations and several biomarkers, both of exposure and effect, were analyzed. Bioavailability of specific classes of pollutants was evaluated by analyzing levels of metallothioneins, the activity of cytochrome P450 1A (CYPIA) and of glutathione S-transferases. Among biomarkers of effect, special attention was paid to the balance between prooxidant challenge and antioxidant defenses, and to the appearance of damage caused by oxidative stress. The analyses of the main components of the antioxidant system included superoxide dismutase, catalase, glutathione peroxidases, glutathione reductase, glyoxalase I and II, and total glutathione. These data were integrated with the measurement of total oxyradical scavenging capacity (TOSC) as an indication of the overall biological resistance to toxicity of different forms of oxyradicals (peroxyl radicals, hydroxyl radicals and peroxynitrite). Results indicated a biological impact in organisms sampled near the disposal site; the impact was particularly evident during 1999 and mainly related to organic chemicals such as PAH. Exposure to these pollutants also caused variations in the levels and activity of several antioxidants. The analysis of TOSC, however, revealed that the overall capacity of specific tissues of organisms to absorb various oxidants was not seriously compromised when challenged with increased prooxidant pressures. Variations of single antioxidants were useful in revealing early warning "biological responses", while integration with TOSC analyses indicated if such changes also reflect a more integrated and functional "biological effect" with possible consequences at the organisms level. The red mullet appears to be a useful sentinel species for a biomarker approach to monitoring impact caused by dredged materials.     

Physiological energetics of the fourth instar of Chinese horseshoe crabs (Tachypleus tridentatus) in response to hypoxic stress and re-oxygenation

Hypoxia associated with eutrophication is a potential threat to the Chinese horseshoe crab Tachypleus tridentatus which inhabits intertidal sand flats in Asia. This study investigated the effect of dissolved oxygen level (DO) (6, 4 and 2 mg O₂ l⁻¹) on the physiological energetics in the juvenile T. tridentatus. They were exposed to various oxygen levels for three days and then transferred to normoxia for three days to examine the recovery from low oxygen stress. Feeding rate, respiration rate and scope for growth were reduced at lower DO levels while absorption efficiency and excretion rate were independent of DO levels. Although full recovery of the physiological responses and scope for growth from hypoxis stress was observed when normoxia resumed, their long term survival in suboptimal habitats with frequent occurrence of hypoxia deserves a close monitoring as hypoxia may be even more common in future in a warming world.     

The sandhopper Talitrus saltator (Crustacea: Amphipoda) as a biomonitor of trace metal bioavailabilities in European coastal waters

The amphipod crustacean Talitrus saltator is an established, easily accessible, biomonitor of trace metal bioavailabilities in coastal waters. We have carried out a geographically widespread collection of T. saltator from European shores, stretching from the north-west Atlantic through the Baltic to the Mediterranean. A primary aim of the work was to establish a database of accumulated trace metal concentrations (Cd, Cr, Cu, Fe, Mn and Zn) in this biomonitor. Statistical analysis has shown significant geographical differences in the bioavailabilities of all the metals, the most distinct being copper, iron and manganese. It has proved possible to identify unusually high accumulated concentrations of Cd, Cr, Cu, Fe, Mn and Zn in this biomonitor, indicative of high metal bioavailability at a particular site. These may serve as reference points for future biomonitoring programmes seeking to identify metal contamination in coastal waters.     

Factors contributing to heavy metal accumulation in sediments and in the intertidal mussel Perna perna in the Gulf of Annaba (Algeria)

This paper presents the results of a seasonal survey of heavy metals accumulated in sediments and in the soft parts of the body of the mussel Perna perna at four stations in the Gulf of Annaba (Algeria). Pooled soft tissues from 10 mussels representing the entire range of sizes were digested in nitric acid. Statistical analysis reveals a significant seasonal effect on all the measured metals, the highest values being recorded in winter. With the exception of Cr, the levels for all metals were significantly higher in the east, at the outlet of the Seybouse River, than at all other monitoring stations. The study also shows that north-western waters are subject to a significantly lower degree of heavy metal pollution than elsewhere in the gulf. Levels were nevertheless within the limits of public health standards.